BAC Information

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BAC

Clone NameB6Ng01-302G05
Chromosome1 (Build37)
Map Location 71,770,185 - 71,878,351
singlet/doubletdoublet
Overlap geneLOC383528
Upstream geneSpag16, A830006F12Rik, LOC100043210, EG667884, EG666083, LOC100042804, LOC100042809, Bard1, LOC667900, Abca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1
Downstream geneLOC675667, EG667931, EG433319, LOC667937, LOC100043255, Mreg, Pecr, Tmem169, Xrcc5, March4, Smarcal1, Ankar, Rpl37a, Igfbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302G05.bB6Ng01-302G05.g
ACCGA096449GA096450
length1,0631,038
definitionB6Ng01-302G05.b B6Ng01-302G05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,877,293 - 71,878,351)(71,770,185 - 71,771,228)
sequence
gaattctttggaagtcccgttgatgaaaatagtcttagaacaaggaaatt
ccatcatcggtcagaggaggtcttcagtcaccacaggacaggggttggct
tgggatgagtaacaataacagagttcctgagtttgctaagactcattgga
aaagcgtttgatggaaatgtagtctgcctggtgcttttggggttagatcc
ttaggagagcgtgttccatcctactggaacgatcaagcagaaatttgatg
ctcagataaaaccaagcccagactcgtcactggtttgaaatctctctgaa
ttctgaaactaaaagacaaggacacgcatgggtccactctctctgtctgt
cagggaaacacactggaaaatgttggacttaacaatacaaccaatgaagt
tatttacgtttagatgaaatgtgcttccaactgcacagctttctatgtat
taaacagcttaaaagcttcccagaagtttccatgcaggtggttgtacgcc
atagcattaaacgttagcaaactcaaagagagccatgaagccagaactca
gactttttgagcaaacaattggtaaaatgtatatagtcttggttttagga
tgagataaaagtacattttctttttttccattagggtccattttggaaga
atgtagctcggtgtattttgacatacccatatcctcaccaaaccaatact
cagattaaaaaaataacaattttctgtttccctgaagggtcctttgtagt
ttttcccagtcaatttctctgaaggttacaccgttctgacatccattagc
cttgactggtcgtacttgcctttgaacagagtattaaaatgttaacataa
ctaactgttactggttatacatccctcagagacatgggcaggtcaatgta
tttcctctcacctgttttttcatttgttcaaaacactatatagcatcact
actgcccagaagagagtgagaacataataattgaaaagaaaagaattcat
ctgccctcgggaaaactaatagaaccatggaaggaacacctatacatata
catatacatatac
gaattctctatattgaactcagggcgtcttcatgcttgcacagcaagcac
ttacatgagccatgccccataccccatacctagcattttctagagacagt
atggattaaaaggaaattttacttatcatttagaatattagaatattttc
tttatatatttttattcccttgagatgagacaaaggtcactagaatgtat
agagtccatttatttattttttccacttttggttcaaaaagaagcgctcc
cagttctcagaacaagcaggcttactttggcttatgtttttatttgcgct
tgtctccacagccctctttgtgcctgtttttccctttccggcccttttga
gtcatatgttgacataactcagtgcaaagccttgggtttgaagagaagtg
gacactaagtccaggtacacagagattcttgtctgataacaccgcaaaca
ctctgcctgcagacttcctacatttgagacataatattttcgaacactaa
tttgccaagcaggttggcggtgactctgcctgcctgctgctgcttgtctg
aattaggaaggctctgtctaccctctctgactccgggtttgtttctcaag
tagacacactaataaagagctccttttgaagtagggaatctaggcttttt
ttcttccctaagctgtggagacaattttcaaaagtaacttctttactttt
gatgaaacacaactcacagctcatctcagaaagaaaaacatctcaaattt
tgcactgttgaaaatttcagtccaagaagctgtgtctttttttttttttt
ttttttttttttgatcatttgataaccttcccttttcttctctatggctt
cacagtttggaggttataggcaccttaagtcattgttcctatctgatgtt
ttcaactggtgctcgggttgttacattactacttaagagaagaaacaaac
agcggacatgagggaagaaaggagcaacaagttaccaggcagagctgaga
gcccagagttgtaagtgagacagaagcgctttaaacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_71877293_71878351
seq2: B6Ng01-302G05.b_45_1107 (reverse)

seq1  GTATATGTATATGTATATGTATAAGGTGTT-CTTCCATGG-TCTA-TAGT  47
      |||||||||||||||||||||| ||||||| ||||||||| |||| ||||
seq2  GTATATGTATATGTATATGTAT-AGGTGTTCCTTCCATGGTTCTATTAGT  49

seq1  TTTCCCGAGGGCAGATGAATTCTTTCTTTTTCAA-TATTATGTTCTCACT  96
      |||||||||||||||||||||||||  ||||||| |||||||||||||||
seq2  TTTCCCGAGGGCAGATGAATTCTTTTCTTTTCAATTATTATGTTCTCACT  99

seq1  CTCTTCTGGGCAGTAGTGATGCTATATAGTGTTTTGAACAAATGAAAAAA  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGGGCAGTAGTGATGCTATATAGTGTTTTGAACAAATGAAAAAA  149

seq1  CAGGTGAGAGGAAATACATTGACCTG-CCATGTCTCTGAGGGATGTATAA  195
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAGGTGAGAGGAAATACATTGACCTGCCCATGTCTCTGAGGGATGTATAA  199

seq1  CCAGTAACAGTTAGTTATGTTAACATTTTAATACTCTGTTCAAAGGCAAG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAACAGTTAGTTATGTTAACATTTTAATACTCTGTTCAAAGGCAAG  249

seq1  TACGACCAGTCAAGGCTAATGGATGTCAGAACGGTGTAACCTTCAGAGAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGACCAGTCAAGGCTAATGGATGTCAGAACGGTGTAACCTTCAGAGAA  299

seq1  ATTGACTGGGAAAAACTACAAAGGACCCTTCAGGGAAACAGAAAATTGTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACTGGGAAAAACTACAAAGGACCCTTCAGGGAAACAGAAAATTGTT  349

seq1  ATTTTTTTAATCTGAGTATTGGTTTGGTGAGGATATGGGTATGTCAAAAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTAATCTGAGTATTGGTTTGGTGAGGATATGGGTATGTCAAAAT  399

seq1  ACACCGAGCTACATTCTTCCAAAATGGACCCTAATGGAAAAAAAGAAAAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCGAGCTACATTCTTCCAAAATGGACCCTAATGGAAAAAAAGAAAAT  449

seq1  GTACTTTTATCTCATCCTAAAACCAAGACTATATACATTTTACCAATTGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTTATCTCATCCTAAAACCAAGACTATATACATTTTACCAATTGT  499

seq1  TTGCTCAAAAAGTCTGAGTTCTGGCTTCATGGCTCTCTTTGAGTTTGCTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCAAAAAGTCTGAGTTCTGGCTTCATGGCTCTCTTTGAGTTTGCTA  549

seq1  ACGTTTAATGCTATGGCGTACAACCACCTGCATGGAAACTTCTGGGAAGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTAATGCTATGGCGTACAACCACCTGCATGGAAACTTCTGGGAAGC  599

seq1  TTTTAAGCTGTTTAATACATAGAAAGCTGTGCAGTTGGAAGCACATTTCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGCTGTTTAATACATAGAAAGCTGTGCAGTTGGAAGCACATTTCA  649

seq1  TCTAAACGTAAATAACTTCATTGGTTGTATTGTTAAGTCCAACATTTTCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACGTAAATAACTTCATTGGTTGTATTGTTAAGTCCAACATTTTCC  699

seq1  AGTGTGTTTCCCTGACAGACAGAGAGAGTGGACCCATGCGTGTCCTTGTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTTTCCCTGACAGACAGAGAGAGTGGACCCATGCGTGTCCTTGTC  749

seq1  TTTTAGTTTCAGAATTCAGAGAGATTTCAAACCAGTGACGAGTCTGGGCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTTCAGAATTCAGAGAGATTTCAAACCAGTGACGAGTCTGGGCT  799

seq1  TGGTTTTATCTGAGCATCAAATTTCTGCTTGATCGTTCCAGTAGGATGGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTATCTGAGCATCAAATTTCTGCTTGATCGTTCCAGTAGGATGGA  849

seq1  ACACGCTCTCCTAAGGATCTAACCCCAAAAGCACCAGGCAGACTACATTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGCTCTCCTAAGGATCTAACCCCAAAAGCACCAGGCAGACTACATTT  899

seq1  CCATCAAACGCTTTTCCAATGAGTCTTAGCAAACTCAGGAACTCTGTTAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAAACGCTTTTCCAATGAGTCTTAGCAAACTCAGGAACTCTGTTAT  949

seq1  TGTTACTCATCCCAAGCCAACCCCTGTCCTGTGGTGACTGAAGACCTCCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTCATCCCAAGCCAACCCCTGTCCTGTGGTGACTGAAGACCTCCT  999

seq1  CTGACCGATGATGGAATTTCCTTGTTCTAAGACTATTTTCATCAACGGGA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCGATGATGGAATTTCCTTGTTCTAAGACTATTTTCATCAACGGGA  1049

seq1  CTTCCAAAGAATTC  1059
      ||||||||||||||
seq2  CTTCCAAAGAATTC  1063

seq1: chr1_71770185_71771228
seq2: B6Ng01-302G05.g_67_1104

seq1  GAATTCTCTATATTGAACTCAGGGCGTCTTCATGCTTGCACAGCAAGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATATTGAACTCAGGGCGTCTTCATGCTTGCACAGCAAGCAC  50

seq1  TTACATGAGCCATGCCCCATACCCCATACCTAGCATTTTCTAGAGACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGAGCCATGCCCCATACCCCATACCTAGCATTTTCTAGAGACAGT  100

seq1  ATGGATTAAAAGGAAATTTTACTTATCATTTAGAATATTAGAATATTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATTAAAAGGAAATTTTACTTATCATTTAGAATATTAGAATATTTTC  150

seq1  TTTATATATTTTTATTCCCTTGAGATGAGACAAAGGTCACTAGAATGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATATTTTTATTCCCTTGAGATGAGACAAAGGTCACTAGAATGTAT  200

seq1  AGAGTCCATTTATTTATTTTTTCCACTTTTGGTTCAAAAAGAAGCGCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCATTTATTTATTTTTTCCACTTTTGGTTCAAAAAGAAGCGCTCC  250

seq1  CAGTTCTCAGAACAAGCAGGCTTACTTTGGCTTATGTTTTTATTTGCGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTCAGAACAAGCAGGCTTACTTTGGCTTATGTTTTTATTTGCGCT  300

seq1  TGTCTCCACAGCCCTCTTTGTGCCTGTTTTTCCCTTTCCGGCCCTTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCACAGCCCTCTTTGTGCCTGTTTTTCCCTTTCCGGCCCTTTTGA  350

seq1  GTCATATGTTGACATAACTCAGTGCAAAGCCTTGGGTTTGAAGAGAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATGTTGACATAACTCAGTGCAAAGCCTTGGGTTTGAAGAGAAGTG  400

seq1  GACACTAAGTCCAGGTACACAGAGATTCTTGTCTGATAACACCGCAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTAAGTCCAGGTACACAGAGATTCTTGTCTGATAACACCGCAAACA  450

seq1  CTCTGCCTGCAGACTTCCTACATTTGAGACATAATATTTTCGAACACTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTGCAGACTTCCTACATTTGAGACATAATATTTTCGAACACTAA  500

seq1  TTTGCCAAGCAGGTTGGCGGTGACTCTGCCTGCCTGCTGCTGCTTGTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAAGCAGGTTGGCGGTGACTCTGCCTGCCTGCTGCTGCTTGTCTG  550

seq1  AATTAGGAAGGCTCTGTCTACCCTCTCTGACTCCGGGTTTGTTTCTCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGAAGGCTCTGTCTACCCTCTCTGACTCCGGGTTTGTTTCTCAAG  600

seq1  TAGACACACTAATAAAGAGCTCCTTTTGAAGTAGGGAATCTAGGCTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACACTAATAAAGAGCTCCTTTTGAAGTAGGGAATCTAGGCTTTTT  650

seq1  TTCTTCCCTAAGCTGTGGAGACAATTTTCAAAAGTAACTTCTTTACTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCCTAAGCTGTGGAGACAATTTTCAAAAGTAACTTCTTTACTTTT  700

seq1  GATGAAACACAACTCACAGCTCATCTCAGAAAGAAAAACATCTCAAATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAACACAACTCACAGCTCATCTCAGAAAGAAAAACATCTCAAATTT  750

seq1  TGCACTGTTGAAAATTTCAGTCCAAGAAGCTGTGTCTTTTTTTTTTTTTT  800
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGCACTGTTGAAAATTTCAGTCCAAGAAGCTGTGTC-TTTTTTTTTTTTT  799

seq1  TTTTTTTTTTTTTGATCATTTGATAACCTTCCC-TTTCTTCTCTATGGCT  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTTTTTTTTTTTGATCATTTGATAACCTTCCCTTTTCTTCTCTATGGCT  849

seq1  TCACAGTTTGGAGGTTATAGGCACCTAAAGTCATTGTTCCTATCTGATGT  899
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCACAGTTTGGAGGTTATAGGCACCTTAAGTCATTGTTCCTATCTGATGT  899

seq1  TTTCAACT-GTGCTCGGGTTGTTACATTTACTACTTAAGAG-AGAAAC-A  946
      |||||||| ||||||||||||||||| |||||||||||||| |||||| |
seq2  TTTCAACTGGTGCTCGGGTTGTTACA-TTACTACTTAAGAGAAGAAACAA  948

seq1  ACAGGCGACATGGAGGGAAGAAAGGAAGCAACAAAGTTACCAGGCAGAGC  996
      ||||  ||||| ||||||||||||| |||||| |||||||||||||||||
seq2  ACAGCGGACAT-GAGGGAAGAAAGG-AGCAAC-AAGTTACCAGGCAGAGC  995

seq1  TGAGAGCCCAAGAGTGGGAGGTGGAGGAACCAGAGGCGCTTTAAACAC  1044
      ||||||||| ||||| | | ||    ||  |||| |||||||||||||
seq2  TGAGAGCCC-AGAGTTGTAAGT----GAGACAGAAGCGCTTTAAACAC  1038