BAC Information

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BAC

Clone NameB6Ng01-302M15
Chromosome1 (Build37)
Map Location 28,879,747 - 28,994,706
singlet/doubletdoublet
Overlap genenone
Upstream geneEG433281, EG665903, Gm597, LOC435614
Downstream geneEG623924, EG433283, LOC100040665, LOC665944
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302M15.bB6Ng01-302M15.g
ACCGA096750GA096751
length8661,009
definitionB6Ng01-302M15.b B6Ng01-302M15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,879,747 - 28,880,612)(28,994,116 - 28,994,706)
sequence
gaattctcttaattttcatgataactaaagaaaatatgtacagagaaaga
agagtcagaataatttgaaaataaaaaaacttttagtttgctgtcactat
tccaattatacccataagactatttgttcaaaatagagcagagaaaactt
tgtaatgaaagtgtgcattattccttgcacattaatatattaaattatca
ggtcagggagttagagtgccctttgggtcaataggccacttaagcatcta
gttaaatttatatgagtacattgcttgaaagataattgtaatcatataaa
atgcctcagttcaatgattccaatgtggcttaaagataatgaatcttttg
tatcattcatcttgggaatattaacattatcaagtcttatgactgctaat
gagctttttgcaaggaaaaagcataaattacaggcgcagatattttgatt
gttataagggtgatgctttaaaaagcaattagtatgcctatgagtaaaca
gcagatctgaaattgactttgatcgcaaggaaactgaatatttcaagcat
cataaccattttatgaaaattaatcccttaataaaactagaaacattgcc
caagttttaaataaagtacagctatgaagtttgaaaagtatcagtagcag
aagagctctggaaggataaaggtaatgatctgtttttatatggattgagc
aacttaaatagacagtgaaaaggagaaagtctaccactcagaattccata
aaacttatagaaaaatatgaacatgaaatctattgaagtgattgaactgt
atgtatgaggcagatatgtatatgtgtgtgcatgtacatgtgtgtgtgtg
tgtgtgtgtgagagag

gaattctcttctgcataatctgcaaataattacaaaatttaatttcctta
catgtaatatggaaacaataaaatttattttgtaacatgaaagtttgtaa
tagcagctttcaattgtctgatgtaattgttgtttcagaggcttactttt
aaataagtttacccttaacagtttcttctgaactctggctagctggttca
actcagatgttctggataaaacttctttctaagctgactgattcaaactt
gactttgaactgaatttctctgcatggcctcaaactaactctggcattct
gttctaaccttttggctctttctcattctgtggcttaattctgtcttcac
tgtgtctagcttgttctctctgaaacttatctttgtaaaactgtcctgat
aaaaaattgcctctgaatcccacaaactgaactaccaccaactcaatgac
tcaattactgactcacgaactgatctcactgcactgaccccaaaatgaca
gactagcaactcaaagaaaggcccactgtatcctgagtgctgagtttcca
agtgtgtaccaacacaaataaatctaactttttgtttacctgaaactagc
tctcttctaggctggccttgaaatcaagagaccagtttgccactgtctgc
taagataagtatatgcctgttttctcgctttatcacttggacctagaagg
catttggatgtgatcccttgccagagtagccatgtagctagattaaagtc
cctctacaaaagttagataggattcttaggtagacattaaattgctgtgt
ttcgtttgttaaattttcattaaaaacctagaaaaaatttatacttcaca
tatttaatggctcattttaattttaagcaaaattgtcaccaataaaataa
tatcatcaagttctgaatttgtctgtgtgtcaggtaaaaataaagaacag
tgcttttcttccagctctacactcagaataatattattttgcacttgcaa
tcatttact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_28879747_28880612
seq2: B6Ng01-302M15.b_47_912

seq1  GAATTCTCTTAATTTTCATGATAACTAAAGAAAATATGTACAGAGAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAATTTTCATGATAACTAAAGAAAATATGTACAGAGAAAGA  50

seq1  AGAGTCAGAATAATTTGAAAATAAAAAAACTTTTAGTTTGCTGTCACTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAGAATAATTTGAAAATAAAAAAACTTTTAGTTTGCTGTCACTAT  100

seq1  TCCAATTATACCCATAAGACTATTTGTTCAAAATAGAGCAGAGAAAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTATACCCATAAGACTATTTGTTCAAAATAGAGCAGAGAAAACTT  150

seq1  TGTAATGAAAGTGTGCATTATTCCTTGCACATTAATATATTAAATTATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGAAAGTGTGCATTATTCCTTGCACATTAATATATTAAATTATCA  200

seq1  GGTCAGGGAGTTAGAGTGCCCTTTGGGTCAATAGGCCACTTAAGCATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGGAGTTAGAGTGCCCTTTGGGTCAATAGGCCACTTAAGCATCTA  250

seq1  GTTAAATTTATATGAGTACATTGCTTGAAAGATAATTGTAATCATATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATTTATATGAGTACATTGCTTGAAAGATAATTGTAATCATATAAA  300

seq1  ATGCCTCAGTTCAATGATTCCAATGTGGCTTAAAGATAATGAATCTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCAGTTCAATGATTCCAATGTGGCTTAAAGATAATGAATCTTTTG  350

seq1  TATCATTCATCTTGGGAATATTAACATTATCAAGTCTTATGACTGCTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTCATCTTGGGAATATTAACATTATCAAGTCTTATGACTGCTAAT  400

seq1  GAGCTTTTTGCAAGGAAAAAGCATAAATTACAGGCGCAGATATTTTGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTTTTGCAAGGAAAAAGCATAAATTACAGGCGCAGATATTTTGATT  450

seq1  GTTATAAGGGTGATGCTTTAAAAAGCAATTAGTATGCCTATGAGTAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAGGGTGATGCTTTAAAAAGCAATTAGTATGCCTATGAGTAAACA  500

seq1  GCAGATCTGAAATTGACTTTGATCGCAAGGAAACTGAATATTTCAAGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATCTGAAATTGACTTTGATCGCAAGGAAACTGAATATTTCAAGCAT  550

seq1  CATAACCATTTTATGAAAATTAATCCCTTAATAAAACTAGAAACATTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACCATTTTATGAAAATTAATCCCTTAATAAAACTAGAAACATTGCC  600

seq1  CAAGTTTTAAATAAAGTACAGCTATGAAGTTTGAAAAGTATCAGTAGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTTAAATAAAGTACAGCTATGAAGTTTGAAAAGTATCAGTAGCAG  650

seq1  AAGAGCTCTGGAAGGATAAAGGTAATGATCTGTTTTTATATGGATTGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTCTGGAAGGATAAAGGTAATGATCTGTTTTTATATGGATTGAGC  700

seq1  AACTTAAATAGACAGTGAAAAGGAGAAAGTCTACCACTCAGAATTCCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAATAGACAGTGAAAAGGAGAAAGTCTACCACTCAGAATTCCATA  750

seq1  AAACTTATAGAAAAATATGAACATGAAATCTATTGAAGTGATTGAACTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTATAGAAAAATATGAACATGAAATCTATTGAAGTGATTGAACTGT  800

seq1  ATGTATGAGGCAGATATGTATATGTGTGTGCATGTACATGTGTGTGTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGAGGCAGATATGTATATGTGTGTGCATGTACATGTGTGTGTGTG  850

seq1  TGTGTGTGTGAGAGAG  866
      ||||||||||||||||
seq2  TGTGTGTGTGAGAGAG  866


seq1: chr1_28994116_28994706
seq2: B6Ng01-302M15.g_64_654 (reverse)

seq1  AGGTAAACAAAAAGTTAGATTTATTTGTGTTGGTACACACTTGGAAACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAACAAAAAGTTAGATTTATTTGTGTTGGTACACACTTGGAAACTC  50

seq1  AGCACTCAGGATACAGTGGGCCTTTCTTTGAGTTGCTAGTCTGTCATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCAGGATACAGTGGGCCTTTCTTTGAGTTGCTAGTCTGTCATTTT  100

seq1  GGGGTCAGTGCAGTGAGATCAGTTCGTGAGTCAGTAATTGAGTCATTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCAGTGCAGTGAGATCAGTTCGTGAGTCAGTAATTGAGTCATTGAG  150

seq1  TTGGTGGTAGTTCAGTTTGTGGGATTCAGAGGCAATTTTTTATCAGGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGTAGTTCAGTTTGTGGGATTCAGAGGCAATTTTTTATCAGGACA  200

seq1  GTTTTACAAAGATAAGTTTCAGAGAGAACAAGCTAGACACAGTGAAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACAAAGATAAGTTTCAGAGAGAACAAGCTAGACACAGTGAAGACA  250

seq1  GAATTAAGCCACAGAATGAGAAAGAGCCAAAAGGTTAGAACAGAATGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAGCCACAGAATGAGAAAGAGCCAAAAGGTTAGAACAGAATGCCA  300

seq1  GAGTTAGTTTGAGGCCATGCAGAGAAATTCAGTTCAAAGTCAAGTTTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAGTTTGAGGCCATGCAGAGAAATTCAGTTCAAAGTCAAGTTTGAA  350

seq1  TCAGTCAGCTTAGAAAGAAGTTTTATCCAGAACATCTGAGTTGAACCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCAGCTTAGAAAGAAGTTTTATCCAGAACATCTGAGTTGAACCAGC  400

seq1  TAGCCAGAGTTCAGAAGAAACTGTTAAGGGTAAACTTATTTAAAAGTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAGAGTTCAGAAGAAACTGTTAAGGGTAAACTTATTTAAAAGTAAG  450

seq1  CCTCTGAAACAACAATTACATCAGACAATTGAAAGCTGCTATTACAAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAAACAACAATTACATCAGACAATTGAAAGCTGCTATTACAAACT  500

seq1  TTCATGTTACAAAATAAATTTTATTGTTTCCATATTACATGTAAGGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTTACAAAATAAATTTTATTGTTTCCATATTACATGTAAGGAAAT  550

seq1  TAAATTTTGTAATTATTTGCAGATTATGCAGAAGAGAATTC  591
      |||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTGTAATTATTTGCAGATTATGCAGAAGAGAATTC  591


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