BAC Information

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BAC

Clone NameB6Ng01-303C16
Chromosome1 (Build37)
Map Location 101,999,309 - 102,000,024
singlet/doubletsinglet
Overlap geneC230078M14Rik
Upstream geneLOC633295
Downstream geneEG666200
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303C16.bB6Ng01-303C16.g
ACCGA097034GA097035
length1,173718
definitionB6Ng01-303C16.b B6Ng01-303C16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccaagcattggattgttcacccactattagggaaagtgagctg
ggtttagacagtcatgagacagttagttttaccctactgaggatgtgttg
ttgccacggtaatcttgctcagtacgagaggaatcgcaggttcagacatt
tggtgtatgtgattggctgaggagccaatggggcaaagctaccatctgtg
ggattatgactaaatgcctctaagtcagaatcccgcccaggtgatatccc
tatctttgttgggtctttctgtgttttaggtatcagagtaactgtggctt
catataatgagttgggtagagtacattctgcttctaaagaactggaatta
gatcttctttgaaggtctgatagaactctgcactaaacccatcttgtcct
gggcttttttttttttggttgggagactattaatgactgcttctatttct
ttaggggatataggaatgcttagatcattaacctgattctgatttaactt
tggtacctggtatctgtctagaaatttgatcatttcatccaggttctcca
ggtttgttgagtatagcattttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtatcccttttcatttctgattttgttaat
taaggtgctgtccctgtgctcttttgtgagtctggctacgggtttattta
tcttgttgacattcttaaaggacctgctcctcctttggttgattctttga
atagttcttgtttccacttggttgatttcacccctgagtttgattatttc
ctgctgtctactcctcttgggtgactttgcttccttttgttctagagctt
ttaggtatgttgtcaagttgctagtgtgtgctctctctagtttctttttg
gaggcactcagagttatgagttttcctattagaaatgcattcattgtgtc
ccataactttgggtatgttgtgcttcatttcattaaactcttaaaaagtc
cttatttccttcttatccttcctgaccaaggtatcattgagagtgctgtt
cagtttccaacatgaatgtcgctttcctatatttatgtggtatcaagaac
agcctcatacatgtgaatctggatgattgcatgagacaatttccaattat
ttttttgtgaacactgggtatga

gaattcctttagataaaaactctaaaagagctatgaaaaattctaaaaga
agtgttttcactctccagagatctccacacagctgatccagataaatact
ctagcaagaactcttctcttgctagaaacaaatatttaaaataactactg
gggctggagagtgtgattggtgtttaagagcactgtctactcttccagag
gtcttgagttcaattcccagcaaccacatgacagatcaaagccacttgta
atgggattaaatgccctcttctggtgtgtctcaagagaaagactgagtac
tcacatacataaaacaagtaaatctttaaaaacaaaacaaagcaaagcaa
aaaaaaaaaaaaaaaaacaaaataaaacaaacaattgctatcattttctg
ctagtttgtcaactcatctcctgtagacaaaaagctcagtctttcattta
catatcaatttagtcatttaccccaagttcctttagggctgtcccataaa
tcagaaattcatgccctagcctcttgacacttaagaaataacagtgtgtg
tgtgtgtgtgtgtgtgtgtgtatgtggtatgtgtgctataatattgcaaa
tgaatttcagagatctgcctgcctttataagcacaaaccttaaattttgc
tgggaggaatcctgtcctgcaattacttttctaccattcccaggagaaaa
tttttgttctgtccagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_101999309_102000024
seq2: B6Ng01-303C16.g_63_780

seq1  GAATTCCTTTAGATAAAAACTCTAAAAGAGCTATGAAAAATTCTAAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTAGATAAAAACTCTAAAAGAGCTATGAAAAATTCTAAAAGA  50

seq1  AGTGTTTTCACTCTCCAGAGATCTCCACACAGCTGATCCAGATAAATACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTCACTCTCCAGAGATCTCCACACAGCTGATCCAGATAAATACT  100

seq1  CTAGCAAGAACTCTTCTCTTGCTAGAAACAAATATTTAAAATAACTACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAAGAACTCTTCTCTTGCTAGAAACAAATATTTAAAATAACTACTG  150

seq1  GGGCTGGAGAGTGTGATTGGTGTTTAAGAGCACTGTCTACTCTTCCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGAGAGTGTGATTGGTGTTTAAGAGCACTGTCTACTCTTCCAGAG  200

seq1  GTCTTGAGTTCAATTCCCAGCAACCACATGACAGATCAAAGCCACTTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAGTTCAATTCCCAGCAACCACATGACAGATCAAAGCCACTTGTA  250

seq1  ATGGGATTAAATGCCCTCTTCTGGTGTGTCTCAAGAGAAAGACTGAGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATTAAATGCCCTCTTCTGGTGTGTCTCAAGAGAAAGACTGAGTAC  300

seq1  TCACATACATAAAACAAGTAAATCTTTAAAAACAAAACAAAGCAAAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATACATAAAACAAGTAAATCTTTAAAAACAAAACAAAGCAAAGCAA  350

seq1  AAAAAAAAAAAAAAAAACAAAATAAAACAAACAATTGCTATCATTTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAACAAAATAAAACAAACAATTGCTATCATTTTCTG  400

seq1  CTAGTTTGTCAACTCATCTCCTGTAGACAAAAAGCTCAGTCTTTCATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTGTCAACTCATCTCCTGTAGACAAAAAGCTCAGTCTTTCATTTA  450

seq1  CATATCAATTTAGTCATTTACCCCAAGTTCCTTTAGGGCTGTCCCATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCAATTTAGTCATTTACCCCAAGTTCCTTTAGGGCTGTCCCATAAA  500

seq1  TCAGAAATTCATGCCCTAGCCTCTTGACACTTAAGAAATAACAGTGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATTCATGCCCTAGCCTCTTGACACTTAAGAAATAACAGTGTGTG  550

seq1  TGTGTGTGTGTGTGTGTGTGTATGTGGTATGTGTGCTATAATATTGCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTATGTGGTATGTGTGCTATAATATTGCAAA  600

seq1  TGAA-TTCAGAGATCTGCCTGCCTTTATAAGCACAAACCTTAAATTTTGC  649
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTCAGAGATCTGCCTGCCTTTATAAGCACAAACCTTAAATTTTGC  650

seq1  T-GGAGGAATCCTGTCCTGCAATTACTTTTCTAACCATT-CCAGGAGAAA  697
      | |||||||||||||||||||||||||||||| |||||| ||||||||||
seq2  TGGGAGGAATCCTGTCCTGCAATTACTTTTCT-ACCATTCCCAGGAGAAA  699

seq1  A-TTTTGCTCTGTTCCAGGA  716
      | ||||| |||| |||||||
seq2  ATTTTTGTTCTG-TCCAGGA  718


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