BAC Information

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BAC

Clone NameB6Ng01-303N03
Chromosome1 (Build37)
Map Location 125,660,242 - 125,661,406
singlet/doubletsinglet
Overlap geneDpp10
Upstream geneLOC666983
Downstream geneLOC666998
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303N03.bB6Ng01-303N03.g
ACCGA097528GA097529
length1,1671,168
definitionB6Ng01-303N03.b B6Ng01-303N03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgttggtgtttttcatcttgacaaaagctacagttatcagaga
agatgatgtattcacaattgagaaaattactttatgatgattagaatgta
agcaagcctgggggaccttttcttgtttagtgactaatatcctatcccaa
catgggtggtgccaattttggggagatggtcctaggctgtgtatgcaaac
aggctgagtaaactctggggagcagtccagaaaggtgtcctgctttctgt
actgacttccttcagtaagggagtgtgtcctaagacagtaggctgaagta
aacatattcttcccaaagttgtttttggtcatcatattttattccagcaa
tagaagcataaataactaaagcattcttctagaaaagagaaaaaaagact
ttacatataattaaccttaaaagaaatataatagttacttgtattatgtg
taatcattaattctaagaaattcttttttgtcaacaactttcttttttat
tacatattttcttcatttatatttatatcttttaaaacaaaaaaaataat
tgacagtgatcataaaaccaaacccacagttcagcaggaattggtagatg
actctcaagtagtcacagaatcaaaattagtccaataatcgtaattgagg
tttttaaatatatacatcatttgtagaacattctctatataattattact
ggttttattattctatgcatatgttcatattgcagatgtcagtgggcaac
ttccaggagtaggtggtatccttatatcatatcgtatatatcaagctcag
gtcttcaggcaagtcagcaagccatctaacctgtccatacctgaagtttt
agaggagttacaagaacaatttacttcaaaatagatcataatttctgagt
taggagctactcaatattcacacacacacacacacacacacacacacaca
cacacacacacacagagacagagagagagagagagactgagacgagacga
gactgagacgagactgagacgagacgagactgagagctcagtgtttcacc
tccactacgctgttttgtcatcagcactgcttgaataggaaggtcatcca
aaggctttccttcttaaggcatctacatggaacatctactcattgttaga
tgagaagctctaatttc
gaattctggggcattagtacatttggggtgctgaaattgaacttaccttt
ataatgcaaacctcctgtagcattctgatttctgtaaactagtcatgttt
ctagtagagtaactcagctgagtcatagtgcattgcctcccaaatccttg
tcagtatttgtttataatccctaagtggtcttaccgagtcttatcacctc
attttctgacctgtcagagctttaggtatcaagtgtgtgtctttccaaac
ttttagtgaacatctcatgatgttttgagggaaatatgttaaccagtttc
tatggtttcttttgttggcactgtaataaaatactctgacaaatgcatct
aacgggggaaaatcacctgtttcagcttatagttcaaggttacagtccat
aatgacaagaaagtaaaaacaggagaatgttgaagcggcttgtcacatga
cagccagtcacagggcagcaacagttattaagcagatcccaatgatgaat
gcttgtattcagctctctttctgcacttagctcaggatcccagccaggga
atgttgctatgtacaataggtgagcacagtcacaaaatcttccaaataca
tggccaagtgattatagatttatcaagttgatatgtaacactgaacactg
tagggcatgtggaccatgccaccaggtggacatgagactggtgaagttga
gcatgtgcaaaccctggtatctcaagaggtttgagatgccaggagagggg
ctgctctcttcctgcttccatgcctcctctggaacatgtaaccatgactc
tcaaccaaggtggccatgggcagtcagtcagtcatatggcacagcacctg
gaatgctgtcccatttcaatgaggtatctcaatagccttagcccttcagc
caatgaccttatatttctggatatgctcatgcccttaccctaaattatat
actccccttgtcaccccaaataaagcgtatgttatctaaatccacatcca
gtagagaaagagaaacagatatcatctcagagagctgctcattaatgatt
gcacggaagtaagtatttctactgaagaaggcgttaagttaaacctcaca
aagaacggcttctctatcctagcctcccctctggcacttggttaactttg
gcctcccggactaatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_125660242_125661406
seq2: B6Ng01-303N03.b_47_1213

seq1  GAATTCTTGTTGGTGTTTTTCATCTTGACAAAAGCTACAGTTATCAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTTGGTGTTTTTCATCTTGACAAAAGCTACAGTTATCAGAGA  50

seq1  AGATGATGTATTCACAATTGAGAAAATTACTTTATGATGATTAGAATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATGTATTCACAATTGAGAAAATTACTTTATGATGATTAGAATGTA  100

seq1  AGCAAGCCTGGGGGACCTTTTCTTGTTTAGTGACTAATATCCTATCCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCCTGGGGGACCTTTTCTTGTTTAGTGACTAATATCCTATCCCAA  150

seq1  CATGGGTGGTGCCAATTTTGGGGAGATGGTCCTAGGCTGTGTATGCAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTGGTGCCAATTTTGGGGAGATGGTCCTAGGCTGTGTATGCAAAC  200

seq1  AGGCTGAGTAAACTCTGGGGAGCAGTCCAGAAAGGTGTCCTGCTTTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGAGTAAACTCTGGGGAGCAGTCCAGAAAGGTGTCCTGCTTTCTGT  250

seq1  ACTGACTTCCTTCAGTAAGGGAGTGTGTCCTAAGACAGTAGGCTGAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACTTCCTTCAGTAAGGGAGTGTGTCCTAAGACAGTAGGCTGAAGTA  300

seq1  AACATATTCTTCCCAAAGTTGTTTTTGGTCATCATATTTTATTCCAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATTCTTCCCAAAGTTGTTTTTGGTCATCATATTTTATTCCAGCAA  350

seq1  TAGAAGCATAAATAACTAAAGCATTCTTCTAGAAAAGAGAAAAAAAGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCATAAATAACTAAAGCATTCTTCTAGAAAAGAGAAAAAAAGACT  400

seq1  TTACATATAATTAACCTTAAAAGAAATATAATAGTTACTTGTATTATGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATATAATTAACCTTAAAAGAAATATAATAGTTACTTGTATTATGTG  450

seq1  TAATCATTAATTCTAAGAAATTCTTTTTTGTCAACAACTTTCTTTTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATTAATTCTAAGAAATTCTTTTTTGTCAACAACTTTCTTTTTTAT  500

seq1  TACATATTTTCTTCATTTATATTTATATCTTTTAAAACAAAAAAAATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTTTCTTCATTTATATTTATATCTTTTAAAACAAAAAAAATAAT  550

seq1  TGACAGTGATCATAAAACCAAACCCACAGTTCAGCAGGAATTGGTAGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGTGATCATAAAACCAAACCCACAGTTCAGCAGGAATTGGTAGATG  600

seq1  ACTCTCAAGTAGTCACAGAATCAAAATTAGTCCAATAATCGTAATTGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCAAGTAGTCACAGAATCAAAATTAGTCCAATAATCGTAATTGAGG  650

seq1  TTTTTAAATATATACATCATTTGTAGAACATTCTCTATATAATTATTACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAATATATACATCATTTGTAGAACATTCTCTATATAATTATTACT  700

seq1  GGTTTTATTATTCTATGCATATGTTCATATTGCAGATGTCAGTGGGCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTATTATTCTATGCATATGTTCATATTGCAGATGTCAGTGGGCAAC  750

seq1  TTCCAGGAGTAGGTGGTATCCTTATATCATATCGTATATATCAAGCTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGAGTAGGTGGTATCCTTATATCATATCGTATATATCAAGCTCAG  800

seq1  GTCTTCAGGCAAGTCAGCAAGCCATCTAACCTGTCCATACCTGAAGTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCAGGCAAGTCAGCAAGCCATCTAACCTGTCCATACCTGAAGTTTT  850

seq1  AGAGGAGTTACAAGAACAATTTACTTCAAAATAGATCATAATTTCTGAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGTTACAAGAACAATTTACTTCAAAATAGATCATAATTTCTGAGT  900

seq1  TAGGAGCTACTCAAATATTCACACACACACACACACACACACACACACAC  950
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TAGGAGCTACTC-AATATTCACACACACACACACACACACACACACACAC  949

seq1  ACACACACACACACAGAGACAGAGAGAGAGAGAGAGACAGAGACAGAGAC  1000
      |||||||||||||||||||||||||||||||||||||| ||||| |||||
seq2  ACACACACACACACAGAGACAGAGAGAGAGAGAGAGACTGAGAC-GAGAC  998

seq1  AGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGAGCTCAAGTG  1050
       ||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||
seq2  -GAGACTGAGAC-GAGACTGAGAC-GAGAC-GAGACTGAGAGCTC-AGTG  1043

seq1  -TTCA-CTCCACTACGCTG-TTTGTCATCAGCACTGC-TGAATAGGAAGG  1096
       |||| ||||||||||||| ||||||||||||||||| ||||||||||||
seq2  TTTCACCTCCACTACGCTGTTTTGTCATCAGCACTGCTTGAATAGGAAGG  1093

seq1  GCCTTCAAAGGGCTTCC-TCTTAAGCATTCTACATTGAACATCTAATCAT  1145
       | | ||||||  |||| |||||||   ||||||| ||||||||| ||||
seq2  TCATCCAAAGGCTTTCCTTCTTAAGGCATCTACATGGAACATCTACTCAT  1143

seq1  TG-TAGATGAGAAGCT---ATTTC  1165
      || |||||||||||||   |||||
seq2  TGTTAGATGAGAAGCTCTAATTTC  1167