This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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Search Result
BAC
Clone Name
B6Ng01-303N08
Chromosome
1 (Build37)
Map Location
146,714,501 - 146,821,611
singlet/doublet
doublet
Overlap gene
LOC667877
Upstream gene
Rgs2
,
Rgs13
,
Rbm6-ps2
,
Rgs1
,
EG639456
,
Rgs21
,
Rgs18
Downstream gene
LOC625057
,
LOC383570
Link
Open Mouse BAC browser
Click to get alignment info.
name
Rgs2
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:19735
MGI:1098271
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Rgs13
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:246709
MGI:2180585
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Rbm6-ps2
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:108213
MGI:1889581
definition
note
: RNA binding motif protein 6, pseudogene 2
pseudo
: _no_value
name
Rgs1
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:50778
MGI:1354694
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
EG639456
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:639456
MGI:3648608
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins
pseudo
: _no_value
name
Rgs21
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:624910
MGI:3645243
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 39 Proteins
name
Rgs18
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:64214
MGI:1927498
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC667877
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:667877
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
pseudo
: _no_value
name
LOC625057
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:625057
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins
pseudo
: _no_value
name
LOC383570
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:383570
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
pseudo
: _no_value
name
Rgs2
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:141802972
GeneID:19735
MGI:1098271
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: regulator of G-protein signaling 2
transcript_id
: NM_009061.3
name
Rgs13
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:142386208
GeneID:246709
MGI:2180585
definition
exception
: mismatches in transcription
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: regulator of G-protein signaling 13
transcript_id
: NM_153171.3
name
Rgs1
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:7657511
GeneID:50778
MGI:1354694
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: regulator of G-protein signaling 1
transcript_id
: NM_015811.1
name
Rgs21
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:149234325
GeneID:624910
MGI:3645243
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 39 Proteins
product
: regulator of G-protein signalling 21
transcript_id
: XM_889451.3
name
Rgs18
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:142378300
GeneID:64214
MGI:1927498
definition
exception
: mismatches in transcription
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: regulator of G-protein signaling 18
transcript_id
: NM_022881.3
name
Rgs2
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:31543586
CCDS:CCDS15347.1
GeneID:19735
MGI:1098271
definition
GO_component
: GO:0005634 - nucleus [Evidence TAS]
GO_function
: GO:0005096 - GTPase activator activity [Evidence TAS]; GO:0004871 - signal transducer activity [Evidence IEA]
GO_process
: GO:0007049 - cell cycle [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0009968 - negative regulation of signal transduction [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence NAS]
codon_start
: 1
product
: regulator of G-protein signaling 2
protein_id
: NP_033087.2
name
Rgs13
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:23346630
CCDS:CCDS15348.1
GeneID:246709
MGI:2180585
definition
GO_component
: GO:0005829 - cytosol [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA]
GO_function
: GO:0005515 - protein binding [Evidence IPI]; GO:0016299 - regulator of G-protein signaling activity [Evidence IDA]; GO:0004871 - signal transducer activity [Evidence IEA]
GO_process
: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IPI]; GO:0045744 - negative regulation of G-protein coupled receptor protein signaling pathway [Evidence IDA]; GO:0009968 - negative regulation of signal transduction [Evidence IEA]
codon_start
: 1
product
: regulator of G-protein signaling 13
protein_id
: NP_694811.1
name
Rgs1
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:7657512
CCDS:CCDS15349.1
GeneID:50778
MGI:1354694
definition
GO_component
: GO:0005886 - plasma membrane [Evidence TAS]
GO_function
: GO:0005096 - GTPase activator activity [Evidence TAS]; GO:0004871 - signal transducer activity [Evidence IEA]
GO_process
: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0009968 - negative regulation of signal transduction [Evidence IEA]
codon_start
: 1
product
: regulator of G-protein signaling 1
protein_id
: NP_056626.1
name
Rgs21
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:149234326
GeneID:624910
MGI:3645243
definition
codon_start
: 1
product
: similar to RGS
protein_id
: XP_894544.3
name
Rgs18
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:12738845
CCDS:CCDS15350.1
GeneID:64214
MGI:1927498
definition
GO_component
: GO:0005737 - cytoplasm [Evidence IDA]
GO_function
: GO:0005096 - GTPase activator activity [Evidence IDA]; GO:0016299 - regulator of G-protein signaling activity [Evidence IDA]; GO:0004871 - signal transducer activity [Evidence IEA]
GO_process
: GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IPI]; GO:0009968 - negative regulation of signal transduction [Evidence IEA]; GO:0008277 - regulation of G-protein coupled receptor protein signaling pathway [Evidence IDA]
codon_start
: 1
product
: regulator of G-protein signaling 18
protein_id
: NP_075019.1
name
EG639456
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:639456
definition
number
: 1
pseudo
: _no_value
name
LOC667877
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:667877
definition
number
: 1
pseudo
: _no_value
name
LOC667877
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:667877
definition
number
: 2
pseudo
: _no_value
name
LOC625057
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:625057
definition
number
: 1
pseudo
: _no_value
name
LOC383570
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:383570
definition
number
: 1
pseudo
: _no_value
name
(CDS detail)
type
STS
link
xref
UniSTS:128437
definition
standard_name
: D1Mit100
name
(CDS detail)
type
STS
link
xref
UniSTS:163098
definition
standard_name
: RH126390
name
(CDS detail)
type
STS
link
xref
UniSTS:214314
definition
standard_name
: RH131031
name
(CDS detail)
type
STS
link
xref
UniSTS:158860
definition
standard_name
: U67187
name
(CDS detail)
type
STS
link
xref
UniSTS:239147
definition
standard_name
: Rgs13
name
(CDS detail)
type
STS
link
xref
UniSTS:128867
definition
standard_name
: D1Mit499
name
(CDS detail)
type
STS
link
xref
UniSTS:128756
definition
standard_name
: D1Mit395
name
(CDS detail)
type
STS
link
xref
UniSTS:124599
definition
standard_name
: 45.MMHAP94FLG6.seq
name
(CDS detail)
type
STS
link
xref
UniSTS:125377
definition
standard_name
: MHAa84b2.seq
name
(CDS detail)
type
STS
link
xref
UniSTS:128864
definition
standard_name
: D1Mit496
name
(CDS detail)
type
STS
link
xref
UniSTS:225213
definition
name
(CDS detail)
type
STS
link
xref
UniSTS:128438
definition
standard_name
: D1Mit101
name
(CDS detail)
type
STS
link
xref
UniSTS:128536
definition
standard_name
: D1Mit198
clone name
MSMg01-337D12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-296N06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-338K17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-319A10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-460P20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-105C07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-408B19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-548C15
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-296M03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-068G10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-431C20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-268P19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-331G09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-475G03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-501M09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-263L10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-156F05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-324C01
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-110N21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-359K02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-330C14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-201P07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-062H16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-441K04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-117J01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-123N09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-395D09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-383F10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-524K12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-313M15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-360H06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-397E20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-420B03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-167P23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-065P10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-132C23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-369N05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-401D02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-504N06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-080K09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-334G08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-343D22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-364K15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-308L19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-138K10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-301L10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-301L12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-272P16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-082K12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-081E22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-065F24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-130E06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-171F09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-534M12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-153D20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-459B04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-096I13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-173B04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-321F10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-316E08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-381H14
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-356C03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-527D23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-408G21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-408I18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-109D09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-206H09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-503L04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-144P09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-365P14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-511I12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-367G12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-391D03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-122L10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-538I23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-337O03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-526N20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-066B04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-119P04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-430H08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-487G04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-150E21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-052H18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-045P17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-047E07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-113H01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-165I17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-340I07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-198H24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-053P15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-194K23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-098A06
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-443H03
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-461D04
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-138P13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-307M12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-469C01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-344H05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-142N22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-174K01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-212K17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-343O09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-206P19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-206K23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-335P07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-252A11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-008H23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-129F02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-285I14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-183A14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-152K08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-152M04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-088P17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-213F09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-279E23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-261O13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-042A15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-041M10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-312M08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-066F20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-194C20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-161D12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-320G11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-344P22
singlet/doublet
doublet
plural/unique
unique
clone name
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doublet
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doublet
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doublet
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doublet
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B6Ng01-104K06
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B6Ng01-247M23
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B6Ng01-181H14
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B6Ng01-136E12
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B6Ng01-184K16
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