BAC Information

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BAC

Clone NameB6Ng01-303P11
Chromosome1 (Build37)
Map Location 196,951,978 - 196,953,082
singlet/doubletsinglet
Overlap geneCrry
Upstream geneEG623172, Plxna2, Cd34, Cd46
Downstream geneCr2, EG635956, LOC623380
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303P11.bB6Ng01-303P11.g
ACCGA097636GA097637
length1,093771
definitionB6Ng01-303P11.b B6Ng01-303P11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttaatatttcttgtaaagacaactaatagttatgaactcca
actaccctcaattctaaaggacagccttgctgactgttgtggtactgtat
tctttgttaaatgtttttttttttttcttttagcaatttgaatttatcat
agctgtctctacttgttctaagttgtttgctgagaaatccacagatgttc
ttacagaaattgcctcctgttatcgataagatgtgaaatgccctctgcag
gctcatatttgaaccttggttctagggtggtggtacattttgggaagacg
tggaacttgtgagagatcaggtcttgctggaggaagctggtcacttgaga
ggccttgaggtttctagcccgattcatacttctggcttgatttctctgca
tcctaacagccaatgtgatataaccagttgcctcatggtcctactaccat
gccttcctactgtgatagattaagcccttaaaccaggagctcaagttaat
ctctcttcccttaaaatgcttcttgtcaggtatttggttagagcaatgag
aaaaataactaatatccctctgttgtaatagattgcttttctcttgctcc
tttcaaaatgcagtttaaatgatctctttatatttaatctgtttagagtt
cttatagcttcatgaatctagatgttcattttctctttatgtttgagaag
tttgctgtcacattttttttaaaaaagtaagctttttgactatttatttt
tctttgttctttcagagagtaccaagctataccaatatgcttaatgatgg
ctcaaaatgcttccccttttttagttcattaaatttttcttctctttgtt
caaacctttgtgtgcattctcagtttactcatcgtattccttgactgtgg
aatttgttttagttttcatttgttttatttactgtatccctgcatttctg
tgttctcctgcaattcacaacctccttcaaagaagtcatcctgaattttg
ttagtatcttttgagctcttgtcagtacagctgcatagtaatcatttgtg
gagcttttgttttccgatgagcgatcatcttttgcttatgcat

gaattctttatctttccaagacgtttatcatgaaggggttggaatggatt
gaatccattgctaagagtggggtgctaaagtctcccactattaatgtatg
aggtgcaatgtgtgctttgagcttattaaaatttcttttttgaatgtggg
tgcccttgcatttggaacataggtgttcagaattgagagtttatcttggt
agatttttcctttgataagtaagaagtgtccttccttatcttttttgata
atattggttgaaagttgatttcattctatattagaatggctactccagct
tgttgttgggaccatttgcttggaaaagaaagtccatcctttggaccatc
tagtgattgccatatccagggatccatcccataatcagcttccaaacgct
gacaccattgcatacactagcaagattttgctgtaaggacccagatatag
ctgtctcttgtgagactataccggggcctagcaaacacagaagtggatgc
ttacagtcagctattggatgggtcacacggcccccaatggaggagctaga
gaaagtacccaaggagctaaagggaactgcaaccctatatgtggaacaac
aatatgaactaaccagtaccctggagctcttgtctctagctgcatatgta
tcaaaagatggcctagtcagccatcactggaaagagaggccctttggact
tgcaaactttatatgccccagtacaggggaacgccagggccaaaaagggg
gagtgggtgggtagggggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_196951978_196953082
seq2: B6Ng01-303P11.b_44_1136

seq1  GAATTCACTTTAATATTTCTTGTAAAGACAACTAATAGTTATGAACTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTAATATTTCTTGTAAAGACAACTAATAGTTATGAACTCCA  50

seq1  ACTACCCTCAATTCTAAAGGACAGCCTTGCTGACTGTTGTGGTACTGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCCTCAATTCTAAAGGACAGCCTTGCTGACTGTTGTGGTACTGTAT  100

seq1  TCTTTGTTAAATGTTTTTTTTTTTTTCTTTTAGCAATTTGAATTTATCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTTAAATGTTTTTTTTTTTTTCTTTTAGCAATTTGAATTTATCAT  150

seq1  AGCTGTCTCTACTTGTTCTAAGTTGTTTGCTGAGAAATCCACAGATGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCTCTACTTGTTCTAAGTTGTTTGCTGAGAAATCCACAGATGTTC  200

seq1  TTACAGAAATTGCCTCCTGTTATCGATAAGATGTGAAATGCCCTCTGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAAATTGCCTCCTGTTATCGATAAGATGTGAAATGCCCTCTGCAG  250

seq1  GCTCATATTTGAACCTTGGTTCTAGGGTGGTGGTACATTTTGGGAAGACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATATTTGAACCTTGGTTCTAGGGTGGTGGTACATTTTGGGAAGACG  300

seq1  TGGAACTTGTGAGAGATCAGGTCTTGCTGGAGGAAGCTGGTCACTTGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTTGTGAGAGATCAGGTCTTGCTGGAGGAAGCTGGTCACTTGAGA  350

seq1  GGCCTTGAGGTTTCTAGCCCGATTCATACTTCTGGCTTGATTTCTCTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGAGGTTTCTAGCCCGATTCATACTTCTGGCTTGATTTCTCTGCA  400

seq1  TCCTAACAGCCAATGTGATATAACCAGTTGCCTCATGGTCCTACTACCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAACAGCCAATGTGATATAACCAGTTGCCTCATGGTCCTACTACCAT  450

seq1  GCCTTCCTACTGTGATAGATTAAGCCCTTAAACCAGGAGCTCAAGTTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCCTACTGTGATAGATTAAGCCCTTAAACCAGGAGCTCAAGTTAAT  500

seq1  CTCTCTTCCCTTAAAATGCTTCTTGTCAGGTATTTGGTTAGAGCAATGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTCCCTTAAAATGCTTCTTGTCAGGTATTTGGTTAGAGCAATGAG  550

seq1  AAAAATAACTAATATCCCTCTGTTGTAATAGATTGCTTTTCTCTTGCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAACTAATATCCCTCTGTTGTAATAGATTGCTTTTCTCTTGCTCC  600

seq1  TTTCAAAATGCAGTTTAAATGATCTCTTTATATTTAATCTGTTTAGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAATGCAGTTTAAATGATCTCTTTATATTTAATCTGTTTAGAGTT  650

seq1  CTTATAGCTTCATGAATCTAGATGTTCATTTTCTCTTTATGTTTGAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGCTTCATGAATCTAGATGTTCATTTTCTCTTTATGTTTGAGAAG  700

seq1  TTTGCTGTCACATTTTTTTTAAAAAAGTAAGCTTTTTGACTATTTATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGTCACATTTTTTTTAAAAAAGTAAGCTTTTTGACTATTTATTTT  750

seq1  TCTTTGTTCTTTCAGAGAGTACCAAGCTATACCAATATGCTTAATGATGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTTCTTTCAGAGAGTACCAAGCTATACCAATATGCTTAATGATGG  800

seq1  CTCAAAATGCTTCCCCTTTTTTAGTTCATTAAATTTTTCTTCTCTTTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAATGCTTCCCCTTTTTTAGTTCATTAAATTTTTCTTCTCTTTGTT  850

seq1  CAAACCTTTGTGTGCATTCTCAGTTTACTCATCGTATTCCTTGACTGTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCTTTGTGTGCATTCTCAGTTTACTCATCGTATTCCTTGACTGTGG  900

seq1  AATTTGTTTTAGTTTTCATTTGTTTTATTTACTGTATCCCTGCATTTTCT  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AATTTGTTTTAGTTTTCATTTGTTTTATTTACTGTATCCCTGCA-TTTCT  949

seq1  GTGTTCTCCTGCAATTCACAACCTCCTTCAAAGAAGTCATCCTGAATTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTCCTGCAATTCACAACCTCCTTCAAAGAAGTCATCCTGAATTTT  999

seq1  TGGTTAAGTATCTTTTGAGCTCCTTTGTCAGTTACAGCTGCCATAGTAAA  1050
        ||| ||||||||||||||||  ||||||| |||||||| |||||||| 
seq2  --GTT-AGTATCTTTTGAGCTC--TTGTCAG-TACAGCTG-CATAGTAA-  1041

seq1  TTCATTTTGTGGAGC-TATGTTTTCCGGATGAGCGATCATCCTTTTGCTT  1099
       ||| |||||||||| | |||||||| ||||||||||||| |||||||||
seq2  -TCA-TTTGTGGAGCTTTTGTTTTCC-GATGAGCGATCAT-CTTTTGCTT  1087

seq1  ATGCAT  1105
      ||||||
seq2  ATGCAT  1093


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