BAC Information

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BAC

Clone NameB6Ng01-304G23
Chromosome1 (Build37)
Map Location 162,910,328 - 162,911,440
singlet/doubletsinglet
Overlap genenone
Upstream gene4930523C07Rik, 4930562F07Rik, Tnn, Mrps14, Cacybp, Rabgap1l, Gpr52, EG620750, Rc3h1
Downstream geneSerpinc1, Zbtb37, Gas5, Dars2, Cenpl, Klhl20, Ankrd45, 4930469G21Rik, EG665117, EG640200, EG620839, Prdx6, Tnfsf4, Tnfsf18, EG435650, LOC100039623, LOC269134, Fasl, AI848100, EG665109, Pigc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304G23.g
ACCGA097993
length1,137
definitionB6Ng01-304G23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggtccccacaggctggcaataagttggggatgaggggagaaag
atactcgtgtcaggtaaaaatttgggggagaattcccctacttatctgta
gaaccgtttctctccattctgagtggaaacaagattggaaagcatacatc
gggtcttccagtgacattgaaagaatattaacgtttacttcccctctaat
ttttgggacctccttcaggtcattaattcctttctacagcagcctccagt
ctacataaatcaccgtgagcaggtcattaactggcctttgcctgctgccc
tcatgccctaggctgtggtgttcttgtctttggtagctcagaccctccta
tggttactgagtaactcccttccatagagctttggcaaaacacagagcct
caaagcaagggcatgcctagctcctctggattgtcgaagaagaaggacct
tagggtaataacagcatcttcgggtggtaattaaggtgggatgaagctta
tcaagagcaagcccggcattatcatgttggctgcttttcccagggtcttg
aagcatcttactggaatttgccccggtcctcggtacagctagaaagttca
gtttgggtttcagtgaaatcaaaccacaagagcaaatatttattgaacat
gctcagtgcacacagctgtgggctctgaatgagataggactcaataaaca
tttatgtttgaagaggtacagattttttttttctgatttagcagttgata
cttccttaatggagagattattaagactttttaaaaaataggcattactg
attcttgaggacagaaaataccccccgggcaatgggcaaagagacacctt
atggcagtggtgttcttatatcagtcaggggcagaagtggatggcagtta
ttcatcctagattaatgcctggtttgatgggccaaagctggttcatgcct
agggcccttaatataattaatacacgacaacaaccaacaaccaataattt
atcaggctggaggtaagtcaagagcaactggggaaaagctcatgccatgt
acatagctcagagtgtagagataagagaaacctacgtagataggcgagtg
cagtcagaaggtgcgaatccagtgaaccggggatgac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_162910328_162911440
seq2: B6Ng01-304G23.g_117_1203 (reverse)

seq1  GTCATCCCCGTGTCACTGGGAATTCTGCCACTCTCCCTGACTTTGCACTC  50
      ||||||||||  |||||||  |||| ||  ||    |||||  |||||||
seq2  GTCATCCCCGGTTCACTGG--ATTC-GCACCT---TCTGAC--TGCACTC  42

seq1  TGCTTTTCTTCTGTGGTTTTCTCTTATCTCCTACAACTTCTGAGCTAATG  100
       || | ||| | || | |||||||||||| |||||   |||||||| |||
seq2  -GCCTATCTAC-GTAGGTTTCTCTTATCT-CTACA--CTCTGAGCT-ATG  86

seq1  TACATGCAATGAGCTTTTTCCCCAAGTTGCTCTTGAC-TACCTCCCAGCC  149
      ||||||  ||||||||||  ||| ||||||||||||| ||||| ||||||
seq2  TACATGGCATGAGCTTTT--CCCCAGTTGCTCTTGACTTACCT-CCAGCC  133

seq1  TTGATTAATATTTATTTGTTTGTTTGTTTGTTTGTTTGTTGTTATTTATT  199
       |||| ||   ||||| |||           ||| |||||||  | ||||
seq2  -TGATAAA---TTATTGGTT----------GTTGGTTGTTGTCGTGTATT  169

seq1  TATTTATTTATGTGCCCTAGGCATGAAACAGCTTTGG-CCATCAAACCAG  248
       |||   ||| | |||||||||||||| ||||||||| ||||||||||||
seq2  AATTATATTAAGGGCCCTAGGCATGAACCAGCTTTGGCCCATCAAACCAG  219

seq1  GCATTAATCTAGGATGAATAACTGCCATCCAC-TCTGCCCCTGACTGATA  297
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCATTAATCTAGGATGAATAACTGCCATCCACTTCTGCCCCTGACTGATA  269

seq1  TAAGAACACCACTGCCAT-AGGTGTCTCTTTGCCCATTGCCCGGGGGGTA  346
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAAGAACACCACTGCCATAAGGTGTCTCTTTGCCCATTGCCCGGGGGGTA  319

seq1  -TTTCTGTCCTCAAGAATCAGTAATGCCTATTTTTTAAAAAGTCTTAATA  395
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTCCTCAAGAATCAGTAATGCCTATTTTTTAAAAAGTCTTAATA  369

seq1  ATCTCTCCATTAAGGAAGTATCAACTGCTAAATCAGAAAAAAAAAATCTG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCCATTAAGGAAGTATCAACTGCTAAATCAGAAAAAAAAAATCTG  419

seq1  TACCTCTTCAAACATAAATGTTTATTGAGTCCTATCTCATTCAGAGCCCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTTCAAACATAAATGTTTATTGAGTCCTATCTCATTCAGAGCCCA  469

seq1  CAGCTGTGTGCACTGAGCATGTTCAATAAATATTTGCTCTTGTGGTTTGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTGTGCACTGAGCATGTTCAATAAATATTTGCTCTTGTGGTTTGA  519

seq1  TTTCACTGAAACCCAAACTGAACTTTCTAGCTGTACCGAGGACCGGGGCA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTGAAACCCAAACTGAACTTTCTAGCTGTACCGAGGACCGGGGCA  569

seq1  AATTCCAGTAAGATGCTTCAAGACCCTGGGAAAAGCAGCCAACATGATAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCAGTAAGATGCTTCAAGACCCTGGGAAAAGCAGCCAACATGATAA  619

seq1  TGCCGGGCTTGCTCTTGATAAGCTTCATCCCACCTTAATTACCACCCGAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGGGCTTGCTCTTGATAAGCTTCATCCCACCTTAATTACCACCCGAA  669

seq1  GATGCTGTTATTACCCTAAGGTCCTTCTTCTTCGACAATCCAGAGGAGCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGTTATTACCCTAAGGTCCTTCTTCTTCGACAATCCAGAGGAGCT  719

seq1  AGGCATGCCCTTGCTTTGAGGCTCTGTGTTTTGCCAAAGCTCTATGGAAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGCCCTTGCTTTGAGGCTCTGTGTTTTGCCAAAGCTCTATGGAAG  769

seq1  GGAGTTACTCAGTAACCATAGGAGGGTCTGAGCTACCAAAGACAAGAACA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTACTCAGTAACCATAGGAGGGTCTGAGCTACCAAAGACAAGAACA  819

seq1  CCACAGCCTAGGGCATGAGGGCAGCAGGCAAAGGCCAGTTAATGACCTGC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCCTAGGGCATGAGGGCAGCAGGCAAAGGCCAGTTAATGACCTGC  869

seq1  TCACGGTGATTTATGTAGACTGGAGGCTGCTGTAGAAAGGAATTAATGAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGGTGATTTATGTAGACTGGAGGCTGCTGTAGAAAGGAATTAATGAC  919

seq1  CTGAAGGAGGTCCCAAAAATTAGAGGGGAAGTAAACGTTAATATTCTTTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGAGGTCCCAAAAATTAGAGGGGAAGTAAACGTTAATATTCTTTC  969

seq1  AATGTCACTGGAAGACCCGATGTATGCTTTCCAATCTTGTTTCCACTCAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCACTGGAAGACCCGATGTATGCTTTCCAATCTTGTTTCCACTCAG  1019

seq1  AATGGAGAGAAACGGTTCTACAGATAAGTAGGGGAATTCTCCCCCAAATT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGAGAAACGGTTCTACAGATAAGTAGGGGAATTCTCCCCCAAATT  1069

seq1  TTTACCTGACACGAGTAT  1113
      ||||||||||||||||||
seq2  TTTACCTGACACGAGTAT  1087