MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-305D06
Chromosome	1 (Build37)
Map Location	118,950,645 - 118,951,796
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Cntnap5a
Downstream gene	B020011L13Rik, LOC100041684, LOC636972, EG666785, EG634762, LOC100042368
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cntnap5a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:636808 MGI:3643623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B020011L13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:547097 MGI:3588191
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	LOC100041684 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041684
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC636972 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:636972
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG666785 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666785 MGI:3645457
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG634762 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:634762 MGI:3648947
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 3 Proteins pseudo : _no_value

name	LOC100042368 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042368
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 40 ESTs

name	Cntnap5a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116734826 GeneID:636808 MGI:3643623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : contactin associated protein-like 5A transcript_id : NM_001077425.1

name	B020011L13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363901 GeneID:547097 MGI:3588191
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : RIKEN cDNA B020011L13 gene, transcript variant 1 transcript_id : XM_488281.4

name	LOC100042368 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234262 GeneID:100042368
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 40 ESTs product : similar to LOC434536 protein transcript_id : XM_001478568.1

name	Cntnap5a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116734827 GeneID:636808 MGI:3643623
definition	GO_function : GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : contactin associated protein-like 5-1 product : contactin associated protein-like 5A protein_id : NP_001070893.1

name	B020011L13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82882344 GeneID:547097 MGI:3588191
definition	codon_start : 1 product : similar to mKIAA1611 protein isoform 1 protein_id : XP_488281.3

name	LOC100042368 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234263 GeneID:100042368
definition	codon_start : 1 product : similar to LOC434536 protein protein_id : XP_001478618.1

name	LOC100041684 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041684
definition	number : 1 pseudo : _no_value

name	LOC100041684 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041684
definition	number : 2 pseudo : _no_value

name	LOC100041684 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041684
definition	number : 3 pseudo : _no_value

name	LOC100041684 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041684
definition	number : 4 pseudo : _no_value

name	LOC100041684 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041684
definition	number : 5 pseudo : _no_value

name	LOC636972 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:636972
definition	number : 1 pseudo : _no_value

name	LOC636972 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:636972
definition	number : 2 pseudo : _no_value

name	LOC636972 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:636972
definition	number : 3 pseudo : _no_value

name	LOC636972 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:636972
definition	number : 4 pseudo : _no_value

name	LOC636972 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:636972
definition	number : 5 pseudo : _no_value

name	LOC636972 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:636972
definition	number : 6 pseudo : _no_value

name	EG666785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666785
definition	number : 1 pseudo : _no_value

name	EG666785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666785
definition	number : 2 pseudo : _no_value

name	EG666785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666785
definition	number : 3 pseudo : _no_value

name	EG666785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666785
definition	number : 4 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128527
definition	standard_name : D1Mit188

name	(CDS detail)
type	STS
link
xref	UniSTS:128698
definition	standard_name : D1Mit340

name	(CDS detail)
type	STS
link
xref	UniSTS:128668
definition	standard_name : D1Mit310

name	(CDS detail)
type	STS
link
xref	UniSTS:131894
definition	standard_name : D9Mit333

name	(CDS detail)
type	STS
link
xref	UniSTS:131895
definition	standard_name : D9Mit333.1

name	(CDS detail)
type	STS
link
xref	UniSTS:179548
definition	standard_name : AW490662

name	(CDS detail)
type	STS
link
xref	UniSTS:122795
definition	standard_name : 04.MMHAP9FRB7.seq

name	EG634762 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149234232 GeneID:634762 MGI:3648947
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 3 Proteins product : predicted gene, EG634762 pseudo : _no_value transcript_id : XR_032950.1

clone name	MSMg01-173I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158C09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-053J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410N02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-534N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411D21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-176C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065P04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-101O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346J11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-070B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271M01
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-305D06.b	B6Ng01-305D06.g
ACC	GA098553	GA098554
length	1,141	1,208
definition	B6Ng01-305D06.b	B6Ng01-305D06.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattccacacccctaagccccttaccccataaaagcccctggcttttga gcctcgtggccggcatctgttatctcctgtgtgggattcatgccggtccg gagctccgtaattaaacgtcctcatgtaattacagcgagtgggtcctcgt gtttctttgggtgctctcacactcccgagactagagaaggggtccccgaa agggggtcttacattctcagcaaaacattctcccatatagactgcgctga gaaaatatcacattacataactgagtcttcaaagaaaccagaaatttaca cttcagttgtgagctacccaccatgtgtttttaaaaccaaactctagtcc tcctgaccactgagcccctccaaaatatttgtttgtttgttttcctttgt ttggtatgagataaggctctattatttagtcctaggaggtccataactca ctctatagaccaacctggcctcagacttgtaatgatccctgtctctgctt tccaagtattgggattaagggctgtgccatcatgccttaatccaattact tttaatgtagctcaacatatttttcttgatcttcagaggacaacagtttt tgaatatccctacaaatctttcctgatttttccccccagaaaaaatataa gacataatttccaaaatttgggatataacaccttttagttatggtctttg ttttcctcccttcattttccctgccccacctcgtatccaaccatgtactt gcatatttatgcactgaaagtgccctgactgtccatgagtgaaccatgtg cttgcatatgtagacactgacagtgccctgactgtccaggagtaggcccc tccaggtggccagaggtaggatcacaggaaccactactgccatagaaagg ttcttgtgtgatctagttctgggagtagaactctaatcctcctatttgca taacaaacagtttgccaattgaagtgctgccctatctttgtgtagtgtaa ggtcattgtgtaacccacaaaatgctagtactaaacagccctctacgaag taatgaaattgtatacttcagattcagtagaaattgtgtgattcagtgta aataaggcatggacaacagaaatattactcaaatcgctgtt	gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc atatatccagaagatgccccaactggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaaactggaaagaacccagat gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg gagtactacacagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagggcatcatcctgagtgaggttacacattcacaaa ggaactcacacaatatgtactcaatgataagtggatattagcccaaaacc taggatacccaagatataagatacaatttcctaaacacatgaaactcaag aaaaattaagactgaagtgtggacactatgcccctccttagaaagtggga acaaaacacccttggaaggagttacagagacaaagtttggagctgagatg aaaggatggaccatctagagactgccttatccagggatccaccccataat cagcatcccaaacgctgacaccattgcatacactagcaagattttatcga aagggacccagatgtagctgtctcttgtgagactatgccggggcctagca aacacagaagtggatgctcacagtcagctaatggatggatcacagggctc ccaatggaggagctagaagaaagttacccaaggagctaagggatctgcca accctattagtgggatcacattatgaactaccaggtacccggagcttttt gactctagcttgctttatgtatccaaaagatgggcctagtcgccactcaa ctgggtaaaagagaggccatggaaccgcaaccttaatttgccctagaact ggtattgccaggcctaaaagtggagtgggctgatttaggggtatctgtgt cgtcaccc
quality values	Open. Hide. 58 31 33 30 62 62 31 25 54 35 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 47 59 62 43 30 34 23 19 34 31 28 28 38 46 62 56 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 37 43 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 58 58 58 58 58 58 58 54 47 58 58 58 58 58 58 58 58 45 54 58 58 58 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 58 58 58 58 58 58 54 58 58 58 58 54 58 47 58 43 58 54 47 58 54 58 58 54 58 58 58 58 58 58 58 58 54 54 54 58 58 58 58 51 58 39 58 58 58 58 58 58 58 58 58 58 58 58 40 58 58 58 51 51 58 58 58 58 58 49 50 58 58 58 58 58 48 40 52 53 38 58 50 58 50 50 53 52 50 58 58 54 58 42 35 58 58 58 51 58 51 58 58 54 49 40 53 52 50 58 48 50 41 58 50 58 58 51 53 43 58 53 53 53 58 51 37 54 50 58 58 58 54 58 58 35 58 58 50 49 51 58 52 52 52 38 41 58 58 50 42 54 51 38 54 42 54 54 49 38 41 54 51 51 45 40 41 40 40 39 16 52 42 53 37 42 52 52 39 38 46 49 47 41 32 39 45 47 54 41 40 42 53 52 40 42 47 37 51 54 45 40 53 53 37 49 35 29 35 31 30 37 53 31 46 39 28 42 40 46 18 32 32 52 35 34 34 31 31 35 40 40 40 37 47 34 32 31 53 40 40 42 33 35 27 32 35 25 34 32 34 31 31 34 34 43 42 31 46 41 42 33 26 27 26 31 30 27 31 31 23 45 35 19 38 38 29 41 29 46 46 33 30 25 31 23 31 38 21 41 46 19 41 29 34 42 25 29 31 21 28 18 32 31 30 31 31 24 6 46 31 33 17 24 20 32 36 34 32 38 43 23 29 25 31 31 17 28 48 11 31 28 10 11 32 14 31 36 29 32 29 26 27 21 29 31 31 31 30 24 17 19 30 48 31 21 13 31 25 27 30 32 31 30 32 31 16 33 30 25 17 20 24 25 11 15 30 44 33 25 15 6 13 13 25 16 6 43 32 25 31 14 33 48 22 30 7 25 7 12 19 23 30 14 10 43 14 30 31 31 19 16 22 12 15 20 20 20 24 40 22 27 22 25 20 31 22 24 37 17 26 17 12 12 3 14 27 21 15 10 9 13 10 15 15 9 32 26 8 5 6 28 40 25 16 23 19 7 5 17 16 18 28 26 14 34 10 17 13 17 17 47 9 15 8 6 13 27 7 13 21 26 7 9 7 30 13 21 13 17 10 6 3 1 2 6 11 10 8 17 8 4 5 4 2 4 21 16 10 7 17 16 20 17 11 8 7 6 5 8 10 8 21 20 24 15 16 16 7 8 11 3 20 9 18 14 17 6 15 11 13 18 5 4 21 3 3 6 4 3 5 5 3 4 4 6 9 25 20 17 8 5 5 13 4 3 3 2 3 4 6 4 7	Open. Hide. 62 35 31 47 62 62 62 54 42 62 42 38 27 15 16 32 24 22 37 42 42 59 59 62 62 62 62 62 62 62 59 62 59 49 62 62 62 62 59 62 62 62 59 62 62 62 62 62 59 62 62 62 59 59 59 62 62 62 59 56 43 42 48 54 59 59 59 62 59 59 59 62 59 54 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 54 59 59 62 62 62 62 62 62 54 62 62 62 62 59 59 59 54 48 54 62 59 56 62 62 62 62 62 62 59 62 62 56 59 62 62 62 62 62 62 62 62 62 59 59 62 62 54 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 54 54 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 56 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 46 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 59 59 56 62 62 59 59 62 62 62 62 62 62 59 62 56 59 59 59 51 56 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 49 62 62 62 47 56 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 56 62 56 62 62 62 46 62 56 62 62 62 62 62 62 62 62 56 56 56 62 56 62 62 56 62 62 62 62 62 62 62 47 62 62 62 62 62 62 56 62 56 62 62 62 62 62 62 62 62 62 56 62 62 56 62 56 56 17 9 15 12 13 20 54 62 62 62 62 62 54 47 62 62 62 50 52 52 43 52 52 52 43 48 62 52 52 62 62 62 62 52 52 49 62 43 52 50 62 62 54 38 52 35 47 52 47 62 62 54 54 54 58 52 54 54 58 52 58 54 49 49 58 58 54 58 58 58 52 52 52 54 36 42 52 58 52 54 58 58 36 39 58 54 39 42 41 58 58 58 34 58 52 50 50 52 46 52 54 58 45 26 41 44 52 48 52 54 42 45 35 47 54 42 54 48 42 42 52 52 40 52 58 54 52 54 52 49 52 52 26 38 52 54 42 58 52 58 58 58 54 58 53 52 51 50 58 58 26 28 50 49 41 32 37 17 58 33 49 49 53 51 37 50 46 54 58 43 38 28 39 45 41 45 49 51 49 45 50 44 35 47 44 42 10 32 21 39 58 21 33 41 54 49 50 58 46 32 19 42 42 31 40 25 40 50 35 30 36 52 37 33 40 6 11 44 27 32 18 30 39 40 37 41 51 39 33 33 52 46 26 39 51 50 44 43 58 26 31 53 32 58 26 35 41 41 51 49 36 13 44 17 18 44 35 50 37 15 18 40 54 49 37 35 52 34 20 25 37 42 51 54 39 42 42 41 30 53 26 21 51 54 21 22 32 34 24 44 50 50 39 29 37 19 52 35 37 33 26 33 19 32 30 28 11 10 17 32 33 31 33 40 31 33 28 26 52 45 31 54 37 45 42 35 37 26 40 15 34 31 37 29 53 33 41 40 32 21 53 53 16 23 30 32 12 32 21 22 15 52 10 29 16 36 9 9 24 40 19 32 33 33 23 45 32 45 18 24 31 26 27 25 45 26 30 31 11 41 14 31 31 31 33 31 31 17 51 51 29 19 15 33 39 18 31 30 37 29 9 12 16 24 14 46 29 13 31 21 20 7 13 31 32 42 25 17 29 17 22 31 31 25 38 31 32 44 9 12 19 22 10 16 19 32 18 29 23 23 30 23 21 39 29 25 11 9 48 44 21 14 16 25 32 17 18 11 19 9 31 13 11 15 7 29 18 26 48 32 8 5 5 5 26 48 31 18 17 25 15 25 15 37 33 13 43 11 43 29 11 17 32 14 28 14 23 29 20 38 44 25 14 16 9 14 6 14 9 21 37 22 12 27 9 18 8 16 38 27 23 21 17 33 27 27 17 29 5 14 11 8 11 7 9 22 24 22 4 5 5 5 7 7 10 6 11 5 3 4 6 8 14 24 16 15 10 24 14 11 20 5 5 8 9 21 16 22 6 6 5 6 21 27 25 9 5 11 9 8 28 8 7 6 20 15 6 21 9 14 4 7 6 4 10 5 8 5 12 5 6 15 4 3 3 8 14 4 4 14 5 6 4 3 3 3 4 2 4 3 1 5 5 2 2 3 9 4 7 4 7 7 11 4 4 6 4 9 21 30 15 4 4 4 21 21 3 1 3 3 1 3 1 5 20 20 22 11 20 8 4 3 1 9 25 9 11 3 3 18 6 11 4 4 7 14 14 4 1 11 3 2 6 7 11 5 13 6 5 4 16 7 5 5 6 4 4 3 2 1 3 7 5 3 3 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_118950645_118951796
seq2: B6Ng01-305D06.b_43_1183

seq1  GAATTCCACACCCCTAAGCCCCTTACCCCATAAAAGCCCCTGGCTTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACCCCTAAGCCCCTTACCCCATAAAAGCCCCTGGCTTTTGA  50

seq1  GCCTCGTGGCCGGCATCTGTTATCTCCTGTGTGGGATTCATGCCGGTCCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCGTGGCCGGCATCTGTTATCTCCTGTGTGGGATTCATGCCGGTCCG  100

seq1  GAGCTCCGTAATTAAACGTCCTCATGTAATTACAGCGAGTGGGTCCTCGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCGTAATTAAACGTCCTCATGTAATTACAGCGAGTGGGTCCTCGT  150

seq1  GTTTCTTTGGGTGCTCTCACACTCCCGAGACTAGAGAAGGGGTCCCCGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTGGGTGCTCTCACACTCCCGAGACTAGAGAAGGGGTCCCCGAA  200

seq1  AGGGGGTCTTACATTCTCAGCAAAACATTCTCCCATATAGACTGCGCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGTCTTACATTCTCAGCAAAACATTCTCCCATATAGACTGCGCTGA  250

seq1  GAAAATATCACATTACATAACTGAGTCTTCAAAGAAACCAGAAATTTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATCACATTACATAACTGAGTCTTCAAAGAAACCAGAAATTTACA  300

seq1  CTTCAGTTGTGAGCTACCCACCATGTGTTTTTAAAACCAAACTCTAGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTTGTGAGCTACCCACCATGTGTTTTTAAAACCAAACTCTAGTCC  350

seq1  TCCTGACCACTGAGCCCCTCCAAAATATTTGTTTGTTTGTTTTCCTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGACCACTGAGCCCCTCCAAAATATTTGTTTGTTTGTTTTCCTTTGT  400

seq1  TTGGTATGAGATAAGGCTCTATTATTTAGTCCTAGGAGGTCCATAACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATGAGATAAGGCTCTATTATTTAGTCCTAGGAGGTCCATAACTCA  450

seq1  CTCTATAGACCAACCTGGCCTCAGACTTGTAATGATCCCTGTCTCTGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATAGACCAACCTGGCCTCAGACTTGTAATGATCCCTGTCTCTGCTT  500

seq1  TCCAAGTATTGGGATTAAGGGCTGTGCCATCATGCCTTAATCCAATTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTATTGGGATTAAGGGCTGTGCCATCATGCCTTAATCCAATTACT  550

seq1  TTTAATGTAGCTCAACATATTTTTCTTGATCTTCAGAGGACAACAGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTAGCTCAACATATTTTTCTTGATCTTCAGAGGACAACAGTTTT  600

seq1  TGAATATCCCTACAAATCTTTCCTGATTTTTCCCCCCAGAAAAAATATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATCCCTACAAATCTTTCCTGATTTTTCCCCCCAGAAAAAATATAA  650

seq1  GACATAATTTCCAAAATTTGGGATATAACACCTTTTAGTTATGGTCTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAATTTCCAAAATTTGGGATATAACACCTTTTAGTTATGGTCTTTG  700

seq1  TTTTCCTCCCTTCATTTTCCCTGCCCCACCTCGTATCCAACCATGTACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCCCTTCATTTTCCCTGCCCCACCTCGTATCCAACCATGTACTT  750

seq1  GCATATTTATGCACTGAAAGTGCCCTGACTGTCCATGAGTGAACCATGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTTATGCACTGAAAGTGCCCTGACTGTCCATGAGTGAACCATGTG  800

seq1  CTTGCATATGTAGACACTGACAGTGCCCTGACTGTCCAGGAGTAGGCCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATATGTAGACACTGACAGTGCCCTGACTGTCCAGGAGTAGGCCCC  850

seq1  TCCAGGTGGCCAGAGGTAGGATCACAGGAACCACTACTGCCATAG-AAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCCAGGTGGCCAGAGGTAGGATCACAGGAACCACTACTGCCATAGAAAGG  900

seq1  TTCTTGTGTGATCTAGTTCTGGGAGTAGAACTCTAATCCTCCTATTTGCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTGTGATCTAGTTCTGGGAGTAGAACTCTAATCCTCCTATTTGCA  950

seq1  TAACAAACAGTTTGCCAATTGAGGTGCTGCCCTATCTTTGTGTAGTGTAA  999
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TAACAAACAGTTTGCCAATTGAAGTGCTGCCCTATCTTTGTGTAGTGTAA  1000

seq1  GGGTCATTGTGTAACCCACAAAATGCTAGTACTAAACAGCCCTCTACGAA  1049
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -GGTCATTGTGTAACCCACAAAATGCTAGTACTAAACAGCCCTCTACGAA  1049

seq1  GTATTGAAAATTGGTATAACTTCAGAATTCAGTAGAAAATTGTGTGATTT  1099
      ||| |||||  | |||| ||||||| ||||||||| ||||||||||| ||
seq2  GTAATGAAA--TTGTAT-ACTTCAG-ATTCAGTAG-AAATTGTGTGA-TT  1093

seq1  CAGTGTTAAATAAAGGCATTGAACAACAGGAAATATTACTCAATACAGCT  1149
      ||||| ||||| |||||| || |||||| |||||||||||||| |  |||
seq2  CAGTG-TAAAT-AAGGCA-TGGACAACA-GAAATATTACTCAA-ATCGCT  1138

seq1  GTT  1152
      |||
seq2  GTT  1141

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information