BAC Information

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BAC

Clone NameB6Ng01-305D15
Chromosome1 (Build37)
Map Location 115,850,491 - 115,851,694
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305D15.bB6Ng01-305D15.g
ACCGA098571GA098572
length1,1971,187
definitionB6Ng01-305D15.b B6Ng01-305D15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatcagtgaaaaatatctttttcatgttgcttcctagaatcaga
agtcaggaaactcaatttaagaacagtttgtctcaactccttagaaggca
cacaaaccaggcatctctgatagctttcaatacaacaaacacttggaggc
ccaggttttcaagcattagttctcaaccttcctaatgcttcaactcttta
atacagtccctcatgttgtgtaactcccaaccataaagttatttccattg
ctatttcataactgaaattttctactgttacaaatcatgatgtaaacacc
tgagtcagtgatgtctttgccacccaaacatgcagactggacatacaaac
attcctatagccctaagactctgaaaagtcagggtcaggtggacccctga
tgtttgctgcccaacctgcccagctgatagagcagctccagattcaaatg
agatagtgtcttaatgtaaaaatattaggtggcaagtgattaaaaaaaga
catcaagtgttaacctctgaacctcatatgcatgtgcatacatacaaatg
tctatacacaccccccccccacacacacacacacagacacctgcttgcca
attcactgatatagacttctttggtggctcttttctgggtttccacatcc
aaatctagggcttcaacagtcactaaataagtcatctccctagcctacta
aggagttttattttggaatgtgtttgcaaattagaaaaacaggtttctgt
caaaattgtgcaagtaatgcatccagtagactgccacagaccctgtgaga
aggagataacacaggttgttatctgtataaccccttccacatgcacacag
agcaactctttttggcttagtaggaaggcagtcctatttccagaacttcc
catgtactatcagacaccccacaggcatctgcttggcaaagtcatatttt
ctagtattgatgtgtgtgggcaatttgtagggttacaaattagaagtgat
tggatggaaaggacctttggcacgacattcagtcagacagtcagaagttg
cctgtgcccacagtttccttatggcagtatatgcctctgtacaacggtat
tttcaatgggatcatcctatttggatagcaacatactgagtagcaggaag
taataccttttccattaattactcatccaatttctctcaaatatgtg

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcaacctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccgcaaacc
taggatacccaacatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaaggagctaaagggatctgcaaccct
ataggtggaacaacattatgagcttacagtaccccggagctcttgactct
agctgcataatatatcaaagatgggcttagtcgcatcactgaaggaagag
cccatgactgccaactttatatgccccagtcagggcattccagtcaaagg
gaatggtgcccaggaaagtggcgtgcgtctactacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_115850491_115851694
seq2: B6Ng01-305D15.b_45_1241

seq1  GAATTCCATCAGTGAAAAATATCTTTTTCATGTTGCTTCCTAGAATCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCAGTGAAAAATATCTTTTTCATGTTGCTTCCTAGAATCAGA  50

seq1  AGTCAGGAAACTCAATTTAAGAACAGTTTGTCTCAACTCCTTAGAAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGAAACTCAATTTAAGAACAGTTTGTCTCAACTCCTTAGAAGGCA  100

seq1  CACAAACCAGGCATCTCTGATAGCTTTCAATACAACAAACACTTGGAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACCAGGCATCTCTGATAGCTTTCAATACAACAAACACTTGGAGGC  150

seq1  CCAGGTTTTCAAGCATTAGTTCTCAACCTTCCTAATGCTTCAACTCTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTTTCAAGCATTAGTTCTCAACCTTCCTAATGCTTCAACTCTTTA  200

seq1  ATACAGTCCCTCATGTTGTGTAACTCCCAACCATAAAGTTATTTCCATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTCCCTCATGTTGTGTAACTCCCAACCATAAAGTTATTTCCATTG  250

seq1  CTATTTCATAACTGAAATTTTCTACTGTTACAAATCATGATGTAAACACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCATAACTGAAATTTTCTACTGTTACAAATCATGATGTAAACACC  300

seq1  TGAGTCAGTGATGTCTTTGCCACCCAAACATGCAGACTGGACATACAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCAGTGATGTCTTTGCCACCCAAACATGCAGACTGGACATACAAAC  350

seq1  ATTCCTATAGCCCTAAGACTCTGAAAAGTCAGGGTCAGGTGGACCCCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTATAGCCCTAAGACTCTGAAAAGTCAGGGTCAGGTGGACCCCTGA  400

seq1  TGTTTGCTGCCCAACCTGCCCAGCTGATAGAGCAGCTCCAGATTCAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCTGCCCAACCTGCCCAGCTGATAGAGCAGCTCCAGATTCAAATG  450

seq1  AGATAGTGTCTTAATGTAAAAATATTAGGTGGCAAGTGATTAAAAAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGTGTCTTAATGTAAAAATATTAGGTGGCAAGTGATTAAAAAAAGA  500

seq1  CATCAAGTGTTAACCTCTGAACCTCATATGCATGTGCATACATACAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGTGTTAACCTCTGAACCTCATATGCATGTGCATACATACAAATG  550

seq1  TCTATACACACCCCCCCCCCACACACACACACACAGACACCTGCTTGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACACACCCCCCCCCCACACACACACACACAGACACCTGCTTGCCA  600

seq1  ATTCACTGATATAGACTTCTTTGGTGGCTCTTTTCTGGGTTTCCACATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTGATATAGACTTCTTTGGTGGCTCTTTTCTGGGTTTCCACATCC  650

seq1  AAATCTAGGGCTTCAACAGTCACTAAATAAGTCATCTCCCTAGCCTACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAGGGCTTCAACAGTCACTAAATAAGTCATCTCCCTAGCCTACTA  700

seq1  AGGAGTTTTATTTTGGAATGTGTTTGCAAATTAGAAAAACAGGTTTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTTTATTTTGGAATGTGTTTGCAAATTAGAAAAACAGGTTTCTGT  750

seq1  CAAAATTGTGCAAGTAATGCATCCAGTAGACTGCCACAGACCCTGTGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTGTGCAAGTAATGCATCCAGTAGACTGCCACAGACCCTGTGAGA  800

seq1  AGGAGATAACACAGGTTGTTATCTGTATAACCCCTTCCACATGCACACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATAACACAGGTTGTTATCTGTATAACCCCTTCCACATGCACACAG  850

seq1  AGCAACTCTTTTTGGCTTAGTAGGAAGGCAGTCCTATTTCCAGAACTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTCTTTTTGGCTTAGTAGGAAGGCAGTCCTATTTCCAGAACTTCC  900

seq1  CATGTACTATCAGACACCCCACAGGCATCTGCTTGGCAAAGTCATATTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTACTATCAGACACCCCACAGGCATCTGCTTGGCAAAGTCATATTTT  950

seq1  CTAGTATTGATGTGTGTGGGCAATTTGTAGGGTTACAAATTAGAAAGTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTAGTATTGATGTGTGTGGGCAATTTGTAGGGTTACAAATTAG-AAGTGA  999

seq1  TTGGGATGGAAAGGACC-TTGGCACGACATTCAGTCAGACAGTCAGAAGG  1049
      || |||||||||||||| |||||||||||||||||||||||||||||| |
seq2  TT-GGATGGAAAGGACCTTTGGCACGACATTCAGTCAGACAGTCAGAA-G  1047

seq1  TTGCCTGTGCCCACAAGTTTTCCCTTATGGCAGTATATGCCTCTGTACAA  1099
      |||||||||||||| |||||  ||||||||||||||||||||||||||||
seq2  TTGCCTGTGCCCAC-AGTTT--CCTTATGGCAGTATATGCCTCTGTACAA  1094

seq1  CGGTATTTTCAATTGGATTCAT-CTATTT-GATAGCAACATACTAAGTAA  1147
      ||||||||||||| ||| |||| |||||| |||||||||||||| |||| 
seq2  CGGTATTTTCAATGGGA-TCATCCTATTTGGATAGCAACATACTGAGTAG  1143

seq1  GAGGGAAAATAAATAACTTTTTCTCATTAATTACTCATCCA---TTTCTC  1194
       |||   ||  |||| |||||   |||||||||||||||||   | ||||
seq2  CAGG---AAGTAATACCTTTT--CCATTAATTACTCATCCAATTTCTCTC  1188

seq1  AAATACTGTG  1204
      ||||| ||||
seq2  AAATA-TGTG  1197


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