BAC Information

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BAC

Clone NameB6Ng01-306C17
Chromosome1 (Build37)
Map Location 143,276,663 - 143,277,508
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnt2, EG226472
Downstream geneLOC639376
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306C17.bB6Ng01-306C17.g
ACCGA099276GA099277
length1,202849
definitionB6Ng01-306C17.b B6Ng01-306C17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtaggaattcaacaaggaagttacctattcagtaactaattaa
tattatataagacagagccaacagctcagggctagtctgcaagatgttta
ctaggacagaaaggacagtctcatccaaatagggtttaccatgtgaaaat
gtaggaaatcccactgagacatgtttctttattaggccctaagaatacag
gcagaaatatagagcataaataaattttatgcctcagcccagcctttctt
ttttatattaacaacagggaggagatgtaaccaccccacaccagcctgaa
atctggctgatcaggtttgactgttagcactaggagagcatcaggggtgg
agcctgctaccctatgggtctgccactcccactgctactacctgatgcct
agctgttccggagccaacatgtggtcacctgcaactggactccaaggttg
atttggcgggaatgggcccctcccctcttcttcataacctggtgctctga
atagtaaaattgagctttgatcagaacctttgttgtcttagctcctttct
ttctctcatccatctagttccctttctttcagctcaagtctgctgcttca
gccataccccgttcctctcaagccgctggatggcacacaacagttagaga
gattgtataaggatgtcaatcaaatagatcatttaatagtataaaagaaa
actgagtcagtggtagatgaaatgtaaaataaggagtatatatttgccac
tgaccaaaatattttatagaaatttctattaaaatatgtaacaataatgt
ttaataactacaaacaatatgaaataatgataaatatttttgtattaaca
tattttccatgaatttgagaacaaagaaagaggagggaaagaaaaactgg
tgaaaatttgttcttaaatgctcagtgtttactaataaaaaaacctgtta
tatgtttcagaaaccttgcattgcacatacaaatgactagaaaagtaatg
atatcatttcacctaattataggggcaggatgacacagagttggcttctt
tgtgaataataaatttgtgaggcttaatttaatttatttggtggttctta
tgcctttatttcaaaaggtgagagataccttgatttaaaacttaactcct
agatgacgtccattctgagttcatacctggatattggaacatggcctact
aa
gaattcttagggtaaatatatttcagtgatgaaactttatgtaataggag
tgtcccagtgaggtagtaagtaattccaagctctgaattaggaagcactc
ctctattttattcgcctttattctttcattatcaagtcaatgattacaaa
tggaaatattattggactgttttcaggaaggaaaaatgtaatttctgttt
agatgtaacataaaattgatcttctattaatctcccaagagcagtgaatg
tcttagaatgtggtgtgaggaagaaggagagataattcatgaaggttgaa
tagagggtacttcatgcacttataggagtacagattgcgttccactctga
gcccagaaacttagtatacctgagatataagatacaatttgcaaaacaca
tgaaactgaagaagaacgaagaccaaagtgtggacactttgccccttctt
agatttggaaacaatcacccatggaaggagttacagagacaacgtttgga
gctgagacaaaaggatggaccatctagagattgccatatccagagatcca
tcccataattagcctccaagacatgacaccattgcatacactagcaagcg
ttggctgaaaggaccctgatatagctgtctcttgtgagactatgtcaggg
cctagcaaacacataagtggatgctcacagtcagctattggatggagcac
agggcccccaatggaggagctagagaaagtatccaaggagctaaggagat
ctgcaaccctgtaggtgcaacaacatttatgaactaaccagtaccccaga
gctcttgactctagcttgcatatgtatcaaaagatggcctagtccggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_143276663_143277508
seq2: B6Ng01-306C17.g_66_914

seq1  GAATTCTTAGGGTAAATATATTTCAGTGATGAAACTTTATGTAATAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGGGTAAATATATTTCAGTGATGAAACTTTATGTAATAGGAG  50

seq1  TGTCCCAGTGAGGTAGTAAGTAATTCCAAGCTCTGAATTAGGAAGCACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCAGTGAGGTAGTAAGTAATTCCAAGCTCTGAATTAGGAAGCACTC  100

seq1  CTCTATTTTATTCGCCTTTATTCTTTCATTATCAAGTCAATGATTACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTTTATTCGCCTTTATTCTTTCATTATCAAGTCAATGATTACAAA  150

seq1  TGGAAATATTATTGGACTGTTTTCAGGAAGGAAAAATGTAATTTCTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATATTATTGGACTGTTTTCAGGAAGGAAAAATGTAATTTCTGTTT  200

seq1  AGATGTAACATAAAATTGATCTTCTATTAATCTCCCAAGAGCAGTGAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTAACATAAAATTGATCTTCTATTAATCTCCCAAGAGCAGTGAATG  250

seq1  TCTTAGAATGTGGTGTGAGGAAGAAGGAGAGATAATTCATGAAGGTTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAATGTGGTGTGAGGAAGAAGGAGAGATAATTCATGAAGGTTGAA  300

seq1  TAGAGGGTACTTCATGCACTTATAGGAGTACAGATTGCGTTCCACTCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGTACTTCATGCACTTATAGGAGTACAGATTGCGTTCCACTCTGA  350

seq1  GCCCAGAAACTTAGTATACCTGAGATATAAGATACAATTTGCAAAACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGAAACTTAGTATACCTGAGATATAAGATACAATTTGCAAAACACA  400

seq1  TGAAACTGAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTGAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTT  450

seq1  AGATTTGGAAACAATCACCCATGGAAGGAGTTACAGAGACAACGTTTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGGAAACAATCACCCATGGAAGGAGTTACAGAGACAACGTTTGGA  500

seq1  GCTGAGACAAAAGGATGGACCATCTAGAGATTGCCATATCCAGAGATCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGACAAAAGGATGGACCATCTAGAGATTGCCATATCCAGAGATCCA  550

seq1  TCCCATAATTAGCCTCCAAGACATGACACCATTGCATACACTAGCAAGCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATAATTAGCCTCCAAGACATGACACCATTGCATACACTAGCAAGCG  600

seq1  TTGGCTGAAAGGACCCTGATATAGCTGTCTCTTGTGAGACTATGTCAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGAAAGGACCCTGATATAGCTGTCTCTTGTGAGACTATGTCAGGG  650

seq1  CCTAGCAAACACATAAGTGGATGCTCACAGTCAGCTATTGGATGGAGCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCAAACACATAAGTGGATGCTCACAGTCAGCTATTGGATGGAGCAC  700

seq1  AGGGCCCCCAATGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAGGAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCCCCAATGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAGGAGAT  750

seq1  CTGCAACCCTGTAGGTGCAACAACA-TTATGAACTAACCAGTACCCCAGA  799
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTGCAACCCTGTAGGTGCAACAACATTTATGAACTAACCAGTACCCCAGA  800

seq1  GCTCTTGACTCTAGC-TGCATATGTATCAAAAGATGGCCTAGT-CGGCC  846
      ||||||||||||||| ||||||||||||||||||||||||||| |||||
seq2  GCTCTTGACTCTAGCTTGCATATGTATCAAAAGATGGCCTAGTCCGGCC  849