BAC Information

Click to search

BAC

Clone NameB6Ng01-306O01
Chromosome1 (Build37)
Map Location 126,323,391 - 126,324,480
singlet/doubletsinglet
Overlap genenone
Upstream geneDpp10
Downstream geneLOC666998, Actr3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306O01.bB6Ng01-306O01.g
ACCGA099796GA099797
length1,0771,092
definitionB6Ng01-306O01.b B6Ng01-306O01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgcttgagctgcatggtctgcagtggctggcaggaattggat
atttacattttttttttaattcagacaaaaaaaaacaaacaaacccacag
atctgagaatgtacacaggtcagaaatgaaggcggtggagatgctgcagt
gagtaaagcatgagacaggcaagtgggggaccagagttgaagtcccagcg
gacattcagcatattcatttgggatataagaggcatagacatgagaatcc
tggaaagttgagggcacacacacacacacacacacacacacacacaaaca
catctgagcactccaagaagctgtctcaaacaagaaaataaaacaatagt
acagaagctggactttttctgtcgtctccatttgtgcactcacaagccac
attctcagtgccttgccctcaaaacacatactcaacctgaagcaactttc
aaattcatcacttttaaggtttcttcgtttcatttatttcttctcggagc
ccatcaatccaaaatataggactcgtcacatttaattttgatccacacca
ctcctgccagggagcccagcagtaagactgctattctggctattagattt
ctaaatgttctgtggaatattctagatcaagaagagagcaggtaagagtg
aggacacaatcctactaatgaggtgatatttataggttttatttttatta
caagaggctaattacctactatgtagatacagctctgatctagcagggtg
taaggctatatttagtgacacagatgacaggccagaaaagttgctttggg
atgcaatcaaaccacatttaaatattttaaaaatttaaatactctcattc
cctattattacctatgtttatatgtgacctctccttttaaattatgcaca
actatggaaatacattttctgtgacctcatacttgattatattccaattt
gtgtatttgatatatggtacacagtcattatatctttctttttttctgaa
ttgcataaaaatatttcttttctgctgaacactttaaatggaatgaagaa
gactgagcctagagagatgctcaatgc
gaattcttttgaactcagaccgtattatgaagctttaaacatgttcaagt
agttgctcttttgttgttacgacacagctatacatgtgtcacaagctggc
ctctaacttgatgtctagccaaaggtaaacttgaaagtcagctccacctt
tctccccttcctgagtgatggagatagaggcttatactactatgcctgat
ttctagttctggatattgaaccaagggctttatgcatgctaggcaaacac
tctaccaactgaactacagtcctgacccctactacttatgtttttgtgtg
tgtgtgtgtgtgtacgtgtgtttaagtcagtattctcatgagacatgcgt
tgtgcttgagattatgacagcatgagaaattagcagtctgggtcctaaaa
tattgcctgagttctttaggaaaaaggaaccagtaatttacatgtaaata
taaaaggagagttgttataagaactgaatctcatgataatggatgttgag
aagtcaaatggtctactatgaatatatgggaaaacaggggagtcaaggtg
aagtcaaaagctaagaatgaagtttggagggtttcttaatgccttttcct
attgctatgataaactactcttacaaaaagaaacttaaaaagggaatggt
atagtttatcacagtgaagaagtcaaggcagtaagggattaaagcagctg
gtcccatatctattagaaatagaaagcagggattgattaatgaattctca
gcttgatatttttccattttaaaacagtccaggaactccaagagtgtggt
cccactttcaattaaggtgggtcttctcatccaatttatattgtcaacgt
aatctctcacaggcatgcccaggagcccctgttccaagtgactatgttct
atcaggataccaattaatgccaaccatcatggaagacacataagaaggac
tgggtatgaagctcatttaatgagaattgtcccctcttgggtcctatgtt
tgaatactttgtcccaaatagagtgcctgtttggcaagctgaagagtgtg
tcattgtgacttgaaaactgttcattaagaacatgaaatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_126323391_126324480
seq2: B6Ng01-306O01.b_45_1121

seq1  GAATTCCATGCTTGAGCTGCATGGTCTGCAGTGGCTGGCAGGAATTGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCTTGAGCTGCATGGTCTGCAGTGGCTGGCAGGAATTGGAT  50

seq1  ATTTACATTTTTTTTTTAATTCAGACAAAAAAAAACAAACAAACCCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATTTTTTTTTTAATTCAGACAAAAAAAAACAAACAAACCCACAG  100

seq1  ATCTGAGAATGTACACAGGTCAGAAATGAAGGCGGTGGAGATGCTGCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGAATGTACACAGGTCAGAAATGAAGGCGGTGGAGATGCTGCAGT  150

seq1  GAGTAAAGCATGAGACAGGCAAGTGGGGGACCAGAGTTGAAGTCCCAGCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAAGCATGAGACAGGCAAGTGGGGGACCAGAGTTGAAGTCCCAGCG  200

seq1  GACATTCAGCATATTCATTTGGGATATAAGAGGCATAGACATGAGAATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCAGCATATTCATTTGGGATATAAGAGGCATAGACATGAGAATCC  250

seq1  TGGAAAGTTGAGGGCACACACACACACACACACACACACACACACAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGTTGAGGGCACACACACACACACACACACACACACACACAAACA  300

seq1  CATCTGAGCACTCCAAGAAGCTGTCTCAAACAAGAAAATAAAACAATAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGAGCACTCCAAGAAGCTGTCTCAAACAAGAAAATAAAACAATAGT  350

seq1  ACAGAAGCTGGACTTTTTCTGTCGTCTCCATTTGTGCACTCACAAGCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGCTGGACTTTTTCTGTCGTCTCCATTTGTGCACTCACAAGCCAC  400

seq1  ATTCTCAGTGCCTTGCCCTCAAAACACATACTCAACCTGAAGCAACTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAGTGCCTTGCCCTCAAAACACATACTCAACCTGAAGCAACTTTC  450

seq1  AAATTCATCACTTTTAAGGTTTCTTCGTTTCATTTATTTCTTCTCGGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATCACTTTTAAGGTTTCTTCGTTTCATTTATTTCTTCTCGGAGC  500

seq1  CCATCAATCCAAAATATAGGACTCGTCACATTTAATTTTGATCCACACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAATCCAAAATATAGGACTCGTCACATTTAATTTTGATCCACACCA  550

seq1  CTCCTGCCAGGGAGCCCAGCAGTAAGACTGCTATTCTGGCTATTAGATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGCCAGGGAGCCCAGCAGTAAGACTGCTATTCTGGCTATTAGATTT  600

seq1  CTAAATGTTCTGTGGAATATTCTAGATCAAGAAGAGAGCAGGTAAGAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGTTCTGTGGAATATTCTAGATCAAGAAGAGAGCAGGTAAGAGTG  650

seq1  AGGACACAATCCTACTAATGAGGTGATATTTATAGGTTTTATTTTTATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACAATCCTACTAATGAGGTGATATTTATAGGTTTTATTTTTATTA  700

seq1  CAAGAGGCTAATTACCTACTATGTAGATACAGCTCTGATCTAGCAGGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGCTAATTACCTACTATGTAGATACAGCTCTGATCTAGCAGGGTG  750

seq1  TAAGGCTATATTTAGTGACACAGATGACAGGCCAGAAAAGTTGCTTTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCTATATTTAGTGACACAGATGACAGGCCAGAAAAGTTGCTTTGGG  800

seq1  ATGCAATCAAACCACATTTAAATATTTTAAAAATTTAAATACTCTCATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATCAAACCACATTTAAATATTTTAAAAATTTAAATACTCTCATTC  850

seq1  CCTATTATTACCTATGTTTATATGTGACCTCTCCTTTTAAATTATGCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTATTACCTATGTTTATATGTGACCTCTCCTTTTAAATTATGCACA  900

seq1  ACTATGGAAATAACATTTTCTGTGACCTCATACTTGATTATATTCCCAAT  950
      ||||||||||| |||||||||||||||||||||||||||||||| |||||
seq2  ACTATGGAAAT-ACATTTTCTGTGACCTCATACTTGATTATATT-CCAAT  948

seq1  TTGTGTATTTGATATATTGGTTACACAGTCATTTATATTCTTTCTTTTTT  1000
      |||||||||||||||||  | |||||||||| ||||| ||||||||||||
seq2  TTGTGTATTTGATATAT--GGTACACAGTCA-TTATA-TCTTTCTTTTTT  994

seq1  TTCTTGAATTTGCAT-AAAATATTTCTTTTCTTGGTTGACACCTTAAATG  1049
      |   |||| |||||| ||||||||||||||| || |  |||| |||||||
seq2  T--CTGAA-TTGCATAAAAATATTTCTTTTC-TGCTGAACACTTTAAATG  1040

seq1  GGAAATGAGGAAGACTGGAGGCTAGAGAGATGGCTCAATGC  1090
      |  ||||| ||||||| ||| |||||||||| |||||||||
seq2  G--AATGAAGAAGACT-GAGCCTAGAGAGAT-GCTCAATGC  1077