BAC Information

Click to search

BAC

Clone NameB6Ng01-307M02
Chromosome1 (Build37)
Map Location 126,454,686 - 126,455,779
singlet/doubletsinglet
Overlap genenone
Upstream geneDpp10
Downstream geneLOC666998, Actr3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307M02.bB6Ng01-307M02.g
ACCGA100445GA100446
length1,1891,096
definitionB6Ng01-307M02.b B6Ng01-307M02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaatattggacatagtactacttgaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggttcatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccccccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagacga
aaggatggaccatctagagactgctatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacctagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctattggatggatcacagggctccca
atggaggagctagaaaaagtagccaaaaagctaaagggatctgcacccta
tagtggaacacattatgaactaaccagtgccccgagctcttgacttctag
ctgcataagtatcaaagtgggcctagtcgcatcactggaagaagaaggcc
aattggactgcaacttgttataatgccccagttacagggatgctgtcaaa
taactgggaatggccttgggtgatagaaagaatggtggt
gaattccagagcatcccgtctctacccactctgtgctgagaagactggca
tgcaccactataaccagtttatgtggtagcaatggaatccacagctccag
tccaactgttccaactgaaatacgccccaagcctttctttcattgttaag
aaatggggaaggaatgaacaaatgaagacaataaggggtatctcattgaa
agtaatattaattatattatggggatcagacagactcataagtgttaatg
aagagtaaaataagtttataggcctatatttccaagttgaacaccattta
caggtacttgttataattgtacttctgatcagcagaagttctcttaaaag
aaatgccattgtgacaaatggatgcttcatgtagggcgactccattattc
aacagtagggaatagctgtgcattagagcaaaaactttagatacatttta
cagatcacagagtggaccagaataaactgagcatggctctatactaggtt
taagattgctttaggtggggaaatcctgtcctcatctctttgcatctaac
attgctattatctgtaacaattattgttccattttttgtgttatttatgt
acatgctgggggtgaaggtaaaggttctgatctctgaccaaaaaggcaga
cagatcacctgcagctggacctacagacagttgtgagccatctgacatag
gtgctagtcctttgcaagaacagcaagttcccttaacatctttgccatct
ctccagcctcaatgtgtttgttgtatgttatgtcttcactaacatctggc
tgtgaatcacaccttggcatctgactgcaatgataagaggaaggaaacac
caccttgtgagggaaagtctattacttttcacttatagatggtctttgaa
gctggcaactggctagccctagatgttggcaagtagggtatgctgaaaga
gatagaaagctatgtgacttgacctgttccaggctttcaggagtatgact
gaaaatgttaggccttttgttctataatcctcaccactttgacataattt
tttagatctaagctagtgcccctaattttaatattggttttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_126454686_126455779
seq2: B6Ng01-307M02.g_67_1162 (reverse)

seq1  AAAAAAAAACAAATAATAAAA-TAGGGGCACCTAGCCTAGATCT-AAAAA  48
      |||||||||| |||| ||||| |||||||| ||||| ||||||| |||||
seq2  AAAAAAAAACCAATATTAAAATTAGGGGCA-CTAGCTTAGATCTAAAAAA  49

seq1  TTATGTC-AAGTGGTGAAGGATATAAGAACAAAGGGCCTAAACATTTTCA  97
      ||||||| |||||||| |||||   |||||||| ||||| ||||||||||
seq2  TTATGTCAAAGTGGTG-AGGATTATAGAACAAAAGGCCT-AACATTTTCA  97

seq1  GTCATACTCCCTGAAAGCCTGGAACAGGTCAAGTCACATAGCTTTCTATC  147
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTCATACT-CCTGAAAGCCTGGAACAGGTCAAGTCACATAGCTTTCTATC  146

seq1  TCTTTCAGCATACCCTACTTGCCAACATCTA-GGCTAGCCAGTTGCCAGC  196
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCTTTCAGCATACCCTACTTGCCAACATCTAGGGCTAGCCAGTTGCCAGC  196

seq1  TTCAAAGACCATCTATAAGTG-AAAGTAATAGAC-TTCCCTCACAAGGTG  244
      ||||||||||||||||||||| |||||||||||| |||||||||||||||
seq2  TTCAAAGACCATCTATAAGTGAAAAGTAATAGACTTTCCCTCACAAGGTG  246

seq1  GTGTTTCCTTCCTCTTATCATTGCAGTCAGATGCCAAGGTGTGATTCACA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCCTTCCTCTTATCATTGCAGTCAGATGCCAAGGTGTGATTCACA  296

seq1  GCCAGATGTTAGTGAAGACATAACATACAACAAACACATTGAGGCTGGAG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGATGTTAGTGAAGACATAACATACAACAAACACATTGAGGCTGGAG  346

seq1  AGATGGCAAAGATGTTAAGGGAACTTGCTGTTCTTGCAAAGGACTAGCAC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCAAAGATGTTAAGGGAACTTGCTGTTCTTGCAAAGGACTAGCAC  396

seq1  CTATGTCAGATGGCTCACAACTGTCTGTAGGTCCAGCTGCAGGTGATCTG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTCAGATGGCTCACAACTGTCTGTAGGTCCAGCTGCAGGTGATCTG  446

seq1  TCTGCCTTTTTGGTCAGAGATCAGAACCTTTACCTTCACCCCCAGCATGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTTTTGGTCAGAGATCAGAACCTTTACCTTCACCCCCAGCATGT  496

seq1  ACATAAATAACACAAAAAATGGAACAATAATTGTTACAGATAATAGCAAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAATAACACAAAAAATGGAACAATAATTGTTACAGATAATAGCAAT  546

seq1  GTTAGATGCAAAGAGATGAGGACAGGATTTCCCCACCTAAAGCAATCTTA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGATGCAAAGAGATGAGGACAGGATTTCCCCACCTAAAGCAATCTTA  596

seq1  AACCTAGTATAGAGCCATGCTCAGTTTATTCTGGTCCACTCTGTGATCTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGTATAGAGCCATGCTCAGTTTATTCTGGTCCACTCTGTGATCTG  646

seq1  TAAAATGTATCTAAAGTTTTTGCTCTAATGCACAGCTATTCCCTACTGTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGTATCTAAAGTTTTTGCTCTAATGCACAGCTATTCCCTACTGTT  696

seq1  GAATAATGGAGTCGCCCTACATGAAGCATCCATTTGTCACAATGGCATTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATGGAGTCGCCCTACATGAAGCATCCATTTGTCACAATGGCATTT  746

seq1  CTTTTAAGAGAACTTCTGCTGATCAGAAGTACAATTATAACAAGTACCTG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAGAGAACTTCTGCTGATCAGAAGTACAATTATAACAAGTACCTG  796

seq1  TAAATGGTGTTCAACTTGGAAATATAGGCCTATAAACTTATTTTACTCTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGTGTTCAACTTGGAAATATAGGCCTATAAACTTATTTTACTCTT  846

seq1  CATTAACACTTATGAGTCTGTCTGATCCCCATAATATAATTAATATTACT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAACACTTATGAGTCTGTCTGATCCCCATAATATAATTAATATTACT  896

seq1  TTCAATGAGATACCCCTTATTGTCTTCATTTGTTCATTCCTTCCCCATTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGAGATACCCCTTATTGTCTTCATTTGTTCATTCCTTCCCCATTT  946

seq1  CTTAACAATGAAAGAAAGGCTTGGGGCGTATTTCAGTTGGAACAGTTGGA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACAATGAAAGAAAGGCTTGGGGCGTATTTCAGTTGGAACAGTTGGA  996

seq1  CTGGAGCTGTGGATTCCATTGCTACCACATAAACTGGTTATAGTGGTGCA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCTGTGGATTCCATTGCTACCACATAAACTGGTTATAGTGGTGCA  1046

seq1  TGCCAGTCTTCTCAGCACAGAGTGGGTAGAGACGGGATGCTCTGGAATTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTCTTCTCAGCACAGAGTGGGTAGAGACGGGATGCTCTGGAATTC  1096