BAC Information

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BAC

Clone NameB6Ng01-307O24
Chromosome1 (Build37)
Map Location 187,427,516 - 187,563,718
singlet/doubletdoublet
Overlap genenone
Upstream geneEG433387, EG629032, LOC666714, Hlx1, Mosc1, Mosc2, LOC100039079, C130074G19Rik, Mark1, Iars2, Bpnt1, Eprs, 9630028B13Rik, LOC100039138, Slc30a10, 5033404E19Rik
Downstream geneLOC677785, Lyplal1, Tgfb2, Rrp15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307O24.bB6Ng01-307O24.g
ACCGA100572GA100573
length1,147125
definitionB6Ng01-307O24.b B6Ng01-307O24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(187,427,516 - 187,428,658)(187,563,594 - 187,563,718)
sequence
gaattcttaacagcttcagaagaggcttatattggaaatgctgtctctct
gttgcttccctaacctttcctggtcccagcctgttctgccttatgggctg
tctacttaagtgaagagcaggaaaggaatctggaatggagaccttccaca
atgcgctctatcccaaggttgtccacaggagcagaagccgagaagaagtc
agctttcatctgagggacaattgcaaaatgttaggtctcactcatgaaaa
ctaatgtgcagacctccctgagcagatgaggccctccagatttcaggagt
ctcctgtcatcgactcactagagcacaatctatattgtcatttgattaat
ggatgcaatgagtgtaaaattgccaattctgatttctctgtccatgccga
ggaagggtcagctcccatgataatttaataccaggaaaatggttatcttc
agagggaaagataacagtaaggtgttctcattctctcttgtcccctcccc
cttctccctcactatcaccttcttatagttccgaggcttcactcaaaggt
cttgagcatgcacatttacagcctaaggcctttttacatttttgttttga
gagtctcactactgtgcccaggctggctttgaactaactctgtagcccag
gctatccttgaatttgttatcctcttgcctcagcctcctgaacggttagg
atgacagaacctgcagcactaggccccggactgtattattatctcttgaa
ggtctaggaggagccaagtgttttacatatctccagtgcataaattattt
tcttcttttttacacagaatacaattgaggcccagaagcactggtcacaa
agtagctaggcaacctcatcctccatgtatctgaacccttggtcctctag
actctaatgtctagactgtcttccccatctcacagcaagcctccatcttc
ttacaggccctctgcacatcttcatcttggctttgctgccagtgaactct
gtctgattgagtgcccttggacaagccatcagtattctctctttcttttt
ttgattattagttctcctctaagctagatgcttttgatctgtctgatttt
tgttggaaatgtttgctggaattattgttttgggagttttattgtaa
tttctgattacagtttcctctcctactatttcaagatgtaagaatcagag
gagcagctagataaacccacctggaaaacacatctctaaaggtatgagtg
gcctattttggggtgggggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_187427516_187428658
seq2: B6Ng01-307O24.b_46_1192

seq1  GAATTCTTAACAGCTTCAGAAGAGGCTTATATTGGAAATGCTGTCTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAACAGCTTCAGAAGAGGCTTATATTGGAAATGCTGTCTCTCT  50

seq1  GTTGCTTCCCTAACCTTTCCTGGTCCCAGCCTGTTCTGCCTTATGGGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTCCCTAACCTTTCCTGGTCCCAGCCTGTTCTGCCTTATGGGCTG  100

seq1  TCTACTTAAGTGAAGAGCAGGAAAGGAATCTGGAATGGAGACCTTCCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTAAGTGAAGAGCAGGAAAGGAATCTGGAATGGAGACCTTCCACA  150

seq1  ATGCGCTCTATCCCAAGGTTGTCCACAGGAGCAGAAGCCGAGAAGAAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGCTCTATCCCAAGGTTGTCCACAGGAGCAGAAGCCGAGAAGAAGTC  200

seq1  AGCTTTCATCTGAGGGACAATTGCAAAATGTTAGGTCTCACTCATGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCATCTGAGGGACAATTGCAAAATGTTAGGTCTCACTCATGAAAA  250

seq1  CTAATGTGCAGACCTCCCTGAGCAGATGAGGCCCTCCAGATTTCAGGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTGCAGACCTCCCTGAGCAGATGAGGCCCTCCAGATTTCAGGAGT  300

seq1  CTCCTGTCATCGACTCACTAGAGCACAATCTATATTGTCATTTGATTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTCATCGACTCACTAGAGCACAATCTATATTGTCATTTGATTAAT  350

seq1  GGATGCAATGAGTGTAAAATTGCCAATTCTGATTTCTCTGTCCATGCCGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCAATGAGTGTAAAATTGCCAATTCTGATTTCTCTGTCCATGCCGA  400

seq1  GGAAGGGTCAGCTCCCATGATAATTTAATACCAGGAAAATGGTTATCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGTCAGCTCCCATGATAATTTAATACCAGGAAAATGGTTATCTTC  450

seq1  AGAGGGAAAGATAACAGTAAGGTGTTCTCATTCTCTCTTGTCCCCTCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAAAGATAACAGTAAGGTGTTCTCATTCTCTCTTGTCCCCTCCCC  500

seq1  CTTCTCCCTCACTATCACCTTCTTATAGTTCCGAGGCTTCACTCAAAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCCTCACTATCACCTTCTTATAGTTCCGAGGCTTCACTCAAAGGT  550

seq1  CTTGAGCATGCACATTTACAGCCTAAGGCCTTTTTACATTTTTGTTTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGCATGCACATTTACAGCCTAAGGCCTTTTTACATTTTTGTTTTGA  600

seq1  GAGTCTCACTACTGTGCCCAGGCTGGCTTTGAACTAACTCTGTAGCCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCACTACTGTGCCCAGGCTGGCTTTGAACTAACTCTGTAGCCCAG  650

seq1  GCTATCCTTGAATTTGTTATCCTCTTGCCTCAGCCTCCTGAACGGTTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCTTGAATTTGTTATCCTCTTGCCTCAGCCTCCTGAACGGTTAGG  700

seq1  ATGACAGAACCTGCAGCACTAGGCCCCGGACTGTATTATTATCTCTTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGAACCTGCAGCACTAGGCCCCGGACTGTATTATTATCTCTTGAA  750

seq1  GGTCTAGGAGGAGCCAAGTGTTTTACATATCTCCAGTGCATAAATTATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAGGAGGAGCCAAGTGTTTTACATATCTCCAGTGCATAAATTATTT  800

seq1  TCTTCTTTTTTACACAGAATACAATTGAGGCCCAGAAGCACTGGTCACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTTTTACACAGAATACAATTGAGGCCCAGAAGCACTGGTCACAA  850

seq1  AGTAGCTAGGCAACCTCATCCTCCATGTATCTGAA-CCTTGGTCCTCTAG  899
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGTAGCTAGGCAACCTCATCCTCCATGTATCTGAACCCTTGGTCCTCTAG  900

seq1  ACTCTAATGTCTAGACTGTCTTCCCCATCTCACAGCAAGCCTCCATCTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAATGTCTAGACTGTCTTCCCCATCTCACAGCAAGCCTCCATCTTC  950

seq1  TTACAGGCCCTCTGCACATCTTCATCTTGGCTTTGCTGCCAGTGAACTCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGCCCTCTGCACATCTTCATCTTGGCTTTGCTGCCAGTGAACTCT  1000

seq1  GTCTGATTGAGTGGCCTTGGAC-AGCCATCAGTATTCTTCTCTTTC-TTT  1047
      ||||||||||||| |||||||| |||||||||||||| |||||||| |||
seq2  GTCTGATTGAGTGCCCTTGGACAAGCCATCAGTATTC-TCTCTTTCTTTT  1049

seq1  TTTGATTATTAGTTCTCTCTTAGGCTAGATTGCTTTTGATCTGTCTGATT  1097
      |||||||||||||||||   || |||||| ||||||||||||||||||||
seq2  TTTGATTATTAGTTCTCCTCTAAGCTAGA-TGCTTTTGATCTGTCTGATT  1098

seq1  TTTGTTTGAAATGTTTGCTGGATATA-TGTTT--GGAGTTTTATTGTAA  1143
      |||||| |||||||||||||||  || |||||  |||||||||||||||
seq2  TTTGTTGGAAATGTTTGCTGGAATTATTGTTTTGGGAGTTTTATTGTAA  1147

seq1: chr1_187563594_187563718
seq2: B6Ng01-307O24.g_71_195 (reverse)

seq1  TCCCCCCCCCCACCCCAAAATAGGCCACTCATACCTTTAGAGATGTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCCCCCACCCCAAAATAGGCCACTCATACCTTTAGAGATGTGTTT  50

seq1  TCCAGGTGGGTTTATCTAGCTGCTCCTCTGATTCTTACATCTTGAAATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTGGGTTTATCTAGCTGCTCCTCTGATTCTTACATCTTGAAATAG  100

seq1  TAGGAGAGGAAACTGTAATCAGAAA  125
      |||||||||||||||||||||||||
seq2  TAGGAGAGGAAACTGTAATCAGAAA  125