MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-308C11
Chromosome	12 (Build37)	1 (Build37)
Map Location	68,072,516 - 68,073,666	117,648,421 - 117,648,745
singlet/doublet	singlet	singlet
Overlap gene	Mdga2
Upstream gene	LOC100040700, EG238217
Downstream gene	LOC100040745
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040700 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040700
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG238217 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238217 MGI:3647985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 10 Proteins

name	Mdga2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320772 MGI:2444706
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040745 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1308 ESTs, 9 Proteins

name	EG238217 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263262 GeneID:238217 MGI:3647985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 10 Proteins product : predicted gene, EG238217 transcript_id : XM_138143.5

name	Mdga2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46275815 GeneID:320772 MGI:2444706
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAM domain containing glycosylphosphatidylinositol anchor 2 transcript_id : NM_207010.1

name	LOC100040745 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263267 GeneID:100040745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1308 ESTs, 9 Proteins product : similar to Rpl17 protein transcript_id : XM_001475174.1

name	EG238217 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20909742 GeneID:238217 MGI:3647985
definition	codon_start : 1 product : similar to RPL10L protein protein_id : XP_138143.1

name	Mdga2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46275816 CCDS:CCDS25945.1 GeneID:320772 MGI:2444706
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : MAM domain containing 1 product : MAM domain containing glycosylphosphatidylinositol anchor 2 protein_id : NP_996893.1

name	LOC100040745 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263268 GeneID:100040745
definition	codon_start : 1 product : similar to Rpl17 protein protein_id : XP_001475224.1

name	LOC100040700 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040700
definition	number : 1 pseudo : _no_value

name	LOC100040700 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040700
definition	number : 2 pseudo : _no_value

clone name	MSMg01-464E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267P06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-264M09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-145I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063O08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-329H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431O01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-525K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135B09
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-167E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057N17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-308C11.b	B6Ng01-308C11.g
ACC	GA100729	GA100730
length	1,153	615
definition	B6Ng01-308C11.b	B6Ng01-308C11.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(68,072,516 - 68,073,666)	(117,648,421 - 117,648,745)
sequence	gaattccttgttttttcatgaccataagttttatgctatttcctgtatct taccttactccatttgaagtttatgatgaagtgtcaagcagactgccctc tctatcctcttccatttgtacatttatacgtggctgggcaacatcacatc attcactatattttcttcaataagatttaggtgttatatagccagcaaca gcaatgagtaaaccaatgacaggtaatagcactaaaatacaaagctcttg acatgtcatatgatcactctctagatgaactatattattcagagatattt ctttgcctaactagcagtaaactactaataggaacatgaaaaacaagtaa acgcatgtcccaatacaaatataaaatcacttcacatttttgttttctgt gtagtttgtcattaatgctaatatccactgatttgcaaatgcaattgggg gaataaaaattacaatgagagattagcatgaaactacattataattaaag cagatattgaaagtatatagtgacttaaaatgcatggctgtggtatggga tttcagtggaggaaaggagcttctgggaaggcctaattatgactgccatc atcatccatacacataaagtatttacaaaactgttcagagttctatcaac aaattgcttcatcaaatgatcatgtcaacatatcaacattaaaggattaa atgatactaaaccataagtttagagctcatgtttatatatcatgaatata tatatatatatatatattcatgtttatatttagaactcatgataaataca tcatgatcatatttagcattcatgctgcatgaaagcaaatgaacctgcaa tgcctacagctgttcttaagctcagactacattctcacacagatcagttt tctcagtaatatgagatctgatatctggagtcatggagttttttgcatgt ctatctaataagggctagaagaaatacaggagaaatgtgtgtttctgtat atctagcaaattagatttgtttgctcattgtaactcggccacatttacca attgcacaacttctagcagaacatttattgggcctgaataaacactttct ccataccttgggggagaagaaaacatgcagtccacaaatgaagtcaatta gtg	gaattcaattatcttcttctattttgaaatattcttgtgcagtaaaagac aaaataaatggatctgtgacatttatcagcatcagaatagtatttaagga ttattgtgataaagttactggctagaaggagccactcaaatgatatgggt tatttgtgtgattatgtgtttttgtttttgagaatcaaggaaataaaaag agcaattagtttctgcttctaaaaatcactctgtactttttgatttttca ttttactttgaatggtgacttagtgaagaagtaattgggttacctcactc aggataatgccctccaggtccatccatttgcctaggaatttcatgaattc attctttttaatagctgagtagtactcaattgtgtaaatgtaacacattt tctgtatcaattcctctgttgggggacatctgggttctttccagcttctg gctattataaataaggctgctatgaacatagtggagcatgtgtccttctt accaaatggaacatattctggatatatgcccaggagaggtattgagggat cctctggtagtactatgtccaatttttctgaggaaccaccagactgattt ccagagtgggttgta
quality values	Open. Hide. 62 47 20 31 62 62 62 62 62 62 62 62 62 62 62 62 37 16 47 62 47 62 44 43 62 62 62 62 62 62 32 32 26 18 27 28 23 27 27 28 43 38 43 32 54 51 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 59 62 62 59 54 42 38 50 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 54 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 54 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 62 62 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 54 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 45 39 58 58 54 58 58 58 58 58 58 34 58 58 58 58 54 58 58 52 58 58 58 58 58 58 58 58 58 49 37 49 40 58 58 58 51 51 58 51 58 58 58 48 58 58 51 45 48 58 58 51 58 58 58 58 58 44 50 58 51 58 53 58 50 58 51 58 58 51 52 58 49 58 58 49 49 50 58 58 58 54 54 58 58 58 53 50 50 58 39 58 52 53 53 53 53 53 50 49 50 39 58 49 50 58 58 53 54 54 47 32 51 53 39 49 44 49 58 46 35 51 50 53 58 53 51 35 47 51 50 58 52 53 53 49 46 54 32 53 51 52 54 49 52 54 38 26 49 39 54 42 49 54 49 37 42 53 53 39 54 42 42 37 25 54 54 53 52 53 54 49 52 39 54 40 52 51 45 42 45 54 52 54 52 53 40 44 51 53 45 45 40 47 51 52 54 42 46 51 52 54 52 54 52 54 52 54 54 54 53 54 53 54 53 53 53 49 32 51 30 40 49 29 53 52 51 52 41 53 49 37 52 32 53 52 32 47 42 31 37 53 53 25 32 52 53 52 32 45 35 45 37 31 31 51 33 26 30 34 31 36 45 51 42 43 33 42 30 31 37 42 35 31 45 39 43 42 30 31 31 45 43 48 33 26 32 31 46 32 29 31 33 31 23 37 32 31 30 24 22 31 42 20 40 27 32 38 29 31 31 37 42 36 31 38 33 33 28 27 32 36 31 34 31 21 31 22 32 30 27 26 41 34 32 31 31 31 30 31 30 31 32 30 31 30 31 24 30 47 46 30 31 33 38 34 23 32 30 25 33 29 31 27 31 27 31 24 25 30 27 25 19 26 29 29 30 25 25 17 16 31 31 20 31 23 31 8 14 30 47 48 48 47 26 23 32 21 32 31 20 29 30 27 31 32 34 15 24 15 13 6 5 21 15 30 31 29 9 18 29 22 30 37 13 9 9 12 14 19 9 25 7 4 31 23 5 4 5 12 6 5 3 26 13 14 5 5 9 25 24 28 24 28 20 28 27 28 21 40 24 9 13 20 19 29 21 47 12 8 14 47 11 28 28 19 24 18 28 34 7 10 13 12 13 12 9 13 9 20 10 7 11 15 16 24 11 13 12 16 7 6 15 9 8 3 2 10 6 21 15 12 5 6 17 20 10 19 14 10 23 18 7 9 10 23 8 13 7 12 8 12 16 4 7 11 17 11 5 4 13 22 12 10 10 7 6 12 11 7 5 4 19 6 4 5 4 5 7 12 5 9 28 22 4 11 5 12 3 3 3 14 14 3 10 5 6 3 2 3 3 2 7 5 4 6 11 17 17 4 4 3 6 4 1 2 2 1 1 5 2 2 1 8	Open. Hide. 62 59 51 44 62 46 43 62 62 59 62 30 34 23 23 27 27 34 32 27 31 31 32 32 50 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 49 51 35 49 43 33 42 48 43 49 38 54 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 54 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 54 62 54 54 62 62 62 54 62 62 62 62 56 51 34 51 51 50 59 41 59 59 59 50 34 62 59 43 51 59 59 62 59 59 56 56 56 44 49 36 48 31 32 54 56 59 56 59 51 59 59 56 59 48 56 49 56 51 56 59 56 59 59 59 43 43 49 48 50 43 56 51 49 39 56 49 59 59 56 54 36 44 49 51 51 49 30 45 46 50 59 30 56 43 34 43 43 46 51 62 59 62 59 41 49 13 8 5 11 13 13 22 39 50 18 24 27 11 24 24 51 46 40 46 51 45 48 40 49 43 43 39 39 49 56 56 51 34 40 43 43 34 43 50 38 50 46 50 49 28 36 26 34 35 50 59 46 38 34 56 49 51 51 49 49 34 28 46 45 44 59 45 59 59 45 43 59 46 51 45 59 43 43 40 38 31 50 31 56 38 59 62 59 56 51 59 50 59 43 44 36 41 18 18 13 32 24 62 45 34 30 32 36 38 22 14 19 21 23 30 35 38 44 50 51 51 24 38 56 51 56 56 56 56 39 50 44 38 32 43 56 47 62 62 62 42 24 38 31 41 51 51 38 51 31 24 31 51 11 38 22 14 11 10 7 8 15 43 20 40 36 47 27 43 43 50 56 46 56 47 21 33 14 11 24 28 46 56 39 46 37 39 42 35 54 41 52 47 39 42 49 38 31 39 10 34 52 31 21 17 23 32 22 25 13 47 42 52 28 29 27 31 26 27 22 23 13 25 12 21 35 32 39 35 28 33 20 32

Alignment Information

BAC End 1

BAC End 2

seq1: chr12_68072516_68073666
seq2: B6Ng01-308C11.b_46_1198

seq1  GAATTCCTTGTTTTTTCATGACCATAAGTTTTATGCTATTTCCTGTATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTTTTTTCATGACCATAAGTTTTATGCTATTTCCTGTATCT  50

seq1  TACCTTACTCCATTTGAAGTTTATGATGAAGTGTCAAGCAGACTGCCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTACTCCATTTGAAGTTTATGATGAAGTGTCAAGCAGACTGCCCTC  100

seq1  TCTATCCTCTTCCATTTGTACATTTATACGTGGCTGGGCAACATCACATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCCTCTTCCATTTGTACATTTATACGTGGCTGGGCAACATCACATC  150

seq1  ATTCACTATATTTTCTTCAATAAGATTTAGGTGTTATATAGCCAGCAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTATATTTTCTTCAATAAGATTTAGGTGTTATATAGCCAGCAACA  200

seq1  GCAATGAGTAAACCAATGACAGGTAATAGCACTAAAATACAAAGCTCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGAGTAAACCAATGACAGGTAATAGCACTAAAATACAAAGCTCTTG  250

seq1  ACATGTCATATGATCACTCTCTAGATGAACTATATTATTCAGAGATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCATATGATCACTCTCTAGATGAACTATATTATTCAGAGATATTT  300

seq1  CTTTGCCTAACTAGCAGTAAACTACTAATAGGAACATGAAAAACAAGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCTAACTAGCAGTAAACTACTAATAGGAACATGAAAAACAAGTAA  350

seq1  ACGCATGTCCCAATACAAATATAAAATCACTTCACATTTTTGTTTTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCATGTCCCAATACAAATATAAAATCACTTCACATTTTTGTTTTCTGT  400

seq1  GTAGTTTGTCATTAATGCTAATATCCACTGATTTGCAAATGCAATTGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTGTCATTAATGCTAATATCCACTGATTTGCAAATGCAATTGGGG  450

seq1  GAATAAAAATTACAATGAGAGATTAGCATGAAACTACATTATAATTAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAAATTACAATGAGAGATTAGCATGAAACTACATTATAATTAAAG  500

seq1  CAGATATTGAAAGTATATAGTGACTTAAAATGCATGGCTGTGGTATGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATTGAAAGTATATAGTGACTTAAAATGCATGGCTGTGGTATGGGA  550

seq1  TTTCAGTGGAGGAAAGGAGCTTCTGGGAAGGCCTAATTATGACTGCCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTGGAGGAAAGGAGCTTCTGGGAAGGCCTAATTATGACTGCCATC  600

seq1  ATCATCCATACACATAAAGTATTTACAAAACTGTTCAGAGTTCTATCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCATACACATAAAGTATTTACAAAACTGTTCAGAGTTCTATCAAC  650

seq1  AAATTGCTTCATCAAATGATCATGTCAACATATCAACATTAAAGGATTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCTTCATCAAATGATCATGTCAACATATCAACATTAAAGGATTAA  700

seq1  ATGATACTAAACCATAAGTTTAGAGCTCATGTTTATATATCATGAATATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACTAAACCATAAGTTTAGAGCTCATGTTTATATATCATGAATATA  750

seq1  TATATATATATATATATTCATGTTTATATTTAGAACTCATGATAAATACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATTCATGTTTATATTTAGAACTCATGATAAATACA  800

seq1  TCATGATCATATTTAGCATTCATGCTGCATGAAAGCAAATGAACCTGCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATCATATTTAGCATTCATGCTGCATGAAAGCAAATGAACCTGCAA  850

seq1  TGCCTACAGCTGTTCTTAAGCTCAGACTACATTCTCACACAGATCAGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACAGCTGTTCTTAAGCTCAGACTACATTCTCACACAGATCAGTTT  900

seq1  TCTCAGTAATATGAGATCTGATATCTGGAGTCATGGAGTTTTTTGCATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTAATATGAGATCTGATATCTGGAGTCATGGAGTTTTTTGCATGT  950

seq1  CTATCTAATAAGGGCTAGAAGAAATACAGGAGAAATTGTGTTGTTTCTTG  1000
      ||||||||||||||||||||||||||||||||||| |||| |||||| ||
seq2  CTATCTAATAAGGGCTAGAAGAAATACAGGAGAAA-TGTG-TGTTTC-TG  997

seq1  TATATCTAGCAAATTAGATTTTGTTTGCTCATTTGTAACTCGGCCACA-T  1049
      |||||||||||||||||| |||||||||||| |||||||||||||||| |
seq2  TATATCTAGCAAATTAGA-TTTGTTTGCTCA-TTGTAACTCGGCCACATT  1045

seq1  TACCATTGCCACAAC-TCTAGCAG-ACA-TTAT---GGCTG-ATAAACAC  1092
      ||||| |  |||||| |||||||| ||| ||||   | ||| ||||||||
seq2  TACCAATTGCACAACTTCTAGCAGAACATTTATTGGGCCTGAATAAACAC  1095

seq1  TTTCTCCATACTTGGGGAGAAAGAAAAACATGAAGTCCACAAATGAAGTC  1142
      ||||||||||| | ||| || |  |||||||| |||||||||||||||||
seq2  TTTCTCCATACCTTGGGGGAGAAGAAAACATGCAGTCCACAAATGAAGTC  1145

seq1  ATATTAGTG  1151
      | |||||||
seq2  A-ATTAGTG  1153

seq1: chr1_117648421_117648745
seq2: B6Ng01-308C11.g_351_677 (reverse)

seq1  TACAA-CCACTCTGGAAATCAGTCTGGCGGTTCCTCAG-AAAATTGGACA  48
      ||||| ||||||||||||||||||||| |||||||||| |||||||||||
seq2  TACAACCCACTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAAATTGGACA  50

seq1  TAGTACTACCAGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAA  98
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  TAGTACTACCAGAGGATCCCTCAATACCTCTCCTGGGCATATATCCAGAA  100

seq1  GATGCCCCAACTGGTAAGAAGCACACAAGCTCCACTATGTTCATAGCAGC  148
       |||  |||  |||||||||| ||||| ||||||||||||||||||||||
seq2  TATGTTCCATTTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGC  150

seq1  CTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAG  198
      ||||||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  CTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGTCCCCCAACAG  200

seq1  AGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTACTACTCA  248
      |||||| ||||||||||||||| ||||| |||||||| ||||||||||||
seq2  AGGAATTGATACAGAAAATGTGTTACATTTACACAATTGAGTACTACTCA  250

seq1  GCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAGTGGATGGACCT  298
      |||||||||||||||||||| ||||||||||||| ||| |||||||||||
seq2  GCTATTAAAAAGAATGAATTCATGAAATTCCTAGGCAAATGGATGGACCT  300

seq1  GGAGGGCATCATCCTGAGTGAGGTAAC  325
      ||||||||| |||||||||||||||||
seq2  GGAGGGCATTATCCTGAGTGAGGTAAC  327

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information