BAC Information

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BAC

Clone NameB6Ng01-308G07
Chromosome1 (Build37)
Map Location 188,053,761 - 188,054,879
singlet/doubletsinglet
Overlap genenone
Upstream geneIars2, Bpnt1, Eprs, 9630028B13Rik, LOC100039138, Slc30a10, 5033404E19Rik, LOC677785, Lyplal1
Downstream geneTgfb2, Rrp15, LOC666832, LOC100042375, D1Pas1, Spata17, Gpatch2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308G07.bB6Ng01-308G07.g
ACCGA100907GA100908
length1,1871,124
definitionB6Ng01-308G07.b B6Ng01-308G07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgctgtctactcctcttgggtgaatttgcttcctttttttctagag
cttttagatgtgttgtcaagctgctagtatgtgctctctcccgttttttc
ttgaaggcactcatagctatgagtttcctcttagaaattgctttcattgt
gtcccaaaggtttgggtacgtttgtgctccatttccatttaaactctcta
aaagtcttatttctttcttatttccctcctttgaaccatgtatcattgga
gaagaagttggtgttcagttcaatgtaatgcttgcttctcgtatatgtat
gagatcgaccctagtcatggtgatcttgcatatgatg
gaattcactagggatgagacttgccctccctagaccagtgtcacctcatt
tcaaagaaagcagcaaggagcccaggtctttgcattgttcttgaaggtta
aataaggcctctgtgagtagcttcaatatgaatctgcaactgttccgggg
agaaaactgtcatttgctggccccagtgtggagctggcagatgaagctga
gaaccaacaagcacactgggaaaggacaatgatgagccagtggcttatcg
atgaggagtgcattttccaaacggggagtctgcttaccagaaaacaatgt
ctgtacctaaactttaactcatttctgcatctacagcagcacacaacagg
cactaattactacctgccgactgtgtaggacccacatcagagatattatg
catacatagcaacccacagtaagagggagtgaattataccctgcaagcca
aatctggcccgtggcttatatttgtaaataaagtttgattaagaagccac
acttgtttgcttaaatatgcctactgataattttgtgctatagggaagaa
tacagtattctcaagagataactcttacgattccccaaaggcaaaaataa
ttattatctgactttggttctttacagaggtttttgttgttcttttccaa
atattgtccaataaaactgagttacccatttcctccttcttcacaagcag
atccctatttttttccagtattatggtcaactgtagttgcattatttcca
cctggaagctatttacttaatgcttctactgttcctcttaccatcacaga
gaccaaaccgcctgtagaaacaccttaaacgagggagggaagattgactt
gtgctcacagttcctacacattccatctgtttgtttcatcctcgagtgct
tggatggaatctgattgtgacagtggtgtgtggcaaaggagaacactact
tcatgacagatggagaaaaaggtgagagagactgagagcaagaaatgctg
actcccacctcccgtgatttaatttcttcgagtatattaccgctttccta
aggttccagagctttccaaaatagcaccaaccaggagcaaaacaagtgtt
tcccacctcaggaaagtacatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_188053761_188054879
seq2: B6Ng01-308G07.g_65_1188 (reverse)

seq1  AATATGTAATTTCCTGA-GTGG--AACACTTGTTTTGCTCCTGG-TGGTG  46
      |||||||| |||||||| ||||  |||||||||||||||||||| |||||
seq2  AATATGTACTTTCCTGAGGTGGGAAACACTTGTTTTGCTCCTGGTTGGTG  50

seq1  CTATTTTGGAAAGCTCTGGAAACCTTAGG-AAGCGGT-ATATACTCGAAG  94
      ||||||||||||||||||| ||||||||| ||||||| ||||||||||||
seq2  CTATTTTGGAAAGCTCTGG-AACCTTAGGAAAGCGGTAATATACTCGAAG  99

seq1  AAATTAAATCACGGGA-GTGGGAGTCAGCCATTTCTTGCTCTCAGTCTCT  143
      |||||||||||||||| ||||||||||| |||||||||||||||||||||
seq2  AAATTAAATCACGGGAGGTGGGAGTCAG-CATTTCTTGCTCTCAGTCTCT  148

seq1  CTCCACCTTTTCTCCATCTGTCATGAAGTAGTGTTCTCCTTTGCCACACA  193
      |||  | |||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTTTTTCTCCATCTGTCATGAAGTAGTGTTCTCCTTTGCCACACA  198

seq1  CCACTGTCACAATCAGATTCCATCCAAGCACTCGAGGATGAAACAAACAG  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTCACAATCAGATTCCATCCAAGCACTCGAGGATGAAACAAACAG  248

seq1  ATGGAATGTGTAGGAACTGTGAGCACAAGTCAATCTTCCCTCCCTCGTTT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATGTGTAGGAACTGTGAGCACAAGTCAATCTTCCCTCCCTCGTTT  298

seq1  AAGGTGTTTCTACAGGCGGTTTGGTCTCTGTGATGGTAAGAGGAACAGTA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGTTTCTACAGGCGGTTTGGTCTCTGTGATGGTAAGAGGAACAGTA  348

seq1  GAAGCATTAAGTAAATAGCTTCCAGGTGGAAATAATGCAACTACAGTTGA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATTAAGTAAATAGCTTCCAGGTGGAAATAATGCAACTACAGTTGA  398

seq1  CCATAATACTGGAAAAAAATAGGGATCTGCTTGTGAAGAAGGAGGAAATG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATACTGGAAAAAAATAGGGATCTGCTTGTGAAGAAGGAGGAAATG  448

seq1  GGTAACTCAGTTTTATTGGACAATATTTGGAAAAGAACAACAAAAACCTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACTCAGTTTTATTGGACAATATTTGGAAAAGAACAACAAAAACCTC  498

seq1  TGTAAAGAACCAAAGTCAGATAATAATTATTTTTGCCTTTGGGGAATCGT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGAACCAAAGTCAGATAATAATTATTTTTGCCTTTGGGGAATCGT  548

seq1  AAGAGTTATCTCTTGAGAATACTGTATTCTTCCCTATAGCACAAAATTAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTATCTCTTGAGAATACTGTATTCTTCCCTATAGCACAAAATTAT  598

seq1  CAGTAGGCATATTTAAGCAAACAAGTGTGGCTTCTTAATCAAACTTTATT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGGCATATTTAAGCAAACAAGTGTGGCTTCTTAATCAAACTTTATT  648

seq1  TACAAATATAAGCCACGGGCCAGATTTGGCTTGCAGGGTATAATTCACTC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATATAAGCCACGGGCCAGATTTGGCTTGCAGGGTATAATTCACTC  698

seq1  CCTCTTACTGTGGGTTGCTATGTATGCATAATATCTCTGATGTGGGTCCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTACTGTGGGTTGCTATGTATGCATAATATCTCTGATGTGGGTCCT  748

seq1  ACACAGTCGGCAGGTAGTAATTAGTGCCTGTTGTGTGCTGCTGTAGATGC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTCGGCAGGTAGTAATTAGTGCCTGTTGTGTGCTGCTGTAGATGC  798

seq1  AGAAATGAGTTAAAGTTTAGGTACAGACATTGTTTTCTGGTAAGCAGACT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGAGTTAAAGTTTAGGTACAGACATTGTTTTCTGGTAAGCAGACT  848

seq1  CCCCGTTTGGAAAATGCACTCCTCATCGATAAGCCACTGGCTCATCATTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGTTTGGAAAATGCACTCCTCATCGATAAGCCACTGGCTCATCATTG  898

seq1  TCCTTTCCCAGTGTGCTTGTTGGTTCTCAGCTTCATCTGCCAGCTCCACA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCCCAGTGTGCTTGTTGGTTCTCAGCTTCATCTGCCAGCTCCACA  948

seq1  CTGGGGCCAGCAAATGACAGTTTTCTCCCCGGAACAGTTGCAGATTCATA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCCAGCAAATGACAGTTTTCTCCCCGGAACAGTTGCAGATTCATA  998

seq1  TTGAAGCTACTCACAGAGGCCTTATTTAACCTTCAAGAACAATGCAAAGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGCTACTCACAGAGGCCTTATTTAACCTTCAAGAACAATGCAAAGA  1048

seq1  CCTGGGCTCCTTGCTGCTTTCTTTGAAATGAGGTGACACTGGTCTAGGGA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGCTCCTTGCTGCTTTCTTTGAAATGAGGTGACACTGGTCTAGGGA  1098

seq1  GGGCAAGTCTCATCCCTAGTGAATTC  1119
      ||||||||||||||||||||||||||
seq2  GGGCAAGTCTCATCCCTAGTGAATTC  1124