BAC Information

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BAC

Clone NameB6Ng01-308G12
Chromosome1 (Build37)
Map Location 67,694,320 - 67,874,371
singlet/doubletdoublet
Overlap genenone
Upstream geneRpe, 1110028C15Rik, Acadl, Myl1, LOC100043192, Lancl1, Cps1, Kif22-ps
Downstream geneErbb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308G12.bB6Ng01-308G12.g
ACCGA100917GA100918
length1,1721,137
definitionB6Ng01-308G12.b B6Ng01-308G12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,694,320 - 67,695,477)(67,873,231 - 67,874,371)
sequence
gaattccttagagaaaatggggctgaacttatgaatttgtactttcttta
aaagttagctgaagtttacggggctgtgtgttggacagtctctttttatc
gtattaaataaatcaagccatctgacaaggttcttgaagttttgggaaat
tagaactctcagttaatttttcttgaaaaaaaattcacctaagttctgag
tctgatggtcacatccttgtgcgttactgctcagactcttcttgaagtgc
agagcactggcaagtgcacagaggccttccatagactgtaaagtttcccc
accatagcaggggaagaaacacacatccccgggcagaatcaaacatttgg
ttttactgctgtgggagagtcttcacacttactattttctttcttttctt
cctcctattttcctcttatgtttcatctttgcatttcatgcagcacaata
agctttgtgctttcacaaaacaatgaaatataaggggtgcaaaagaaagc
aattcccttcattcttagcaattgatagagagtacttagaacccagaccc
tcacatgaattactggcagagaatatgtttgcatctattgccaacttgac
accaaaacccatgaatgaagtgtgatgcttttccctttcctcgggtatta
aagaggattgaagtgctattatgtagctctctttcattcatctctattta
tctgaataggaaaatgattttattgaattgtggttgcacatatggcaagt
gttatttttctggattgctggcagtgaaatgcaacgcaaaaacagagcag
ggttaaaagcacagacaccgtgttctctttccaggacgggatgccattca
gagtaagccatactgactgcaaagatcctccaggtcttctctggacccat
gttcttacagccacattgcagaggcatgagagatgcatttctgaaccctc
actgtgaaaaggctgtgacttcatttggcccagatagcagtgacactttg
ctactttggaaataatcacctaagatctcatttaattattttcacttctt
actatatatctatccctaacccaagggcattaaacaacactagcatgcca
gtaaggaaaaaaaggtcaatgctgatggaaagttccagaaggcctgaatc
ctcctagaatgtctccagctct

gaattctaagaatgataatgacagagcatttgagcatgtgagacacggag
tagggactaaggcaagtttaaaagccattcaatgagaaaaatagcaatgg
gcattgagaacgatgtcagtaaaaccttacaggtaggatgctcataaggt
aaaatgatgagtgcttcctttactgaggagaaaaaggatagttatggaaa
attatcgcaatttgagtggtgcaataaaaaaagatagcccttgtttactc
tgctacacaaggctatttattaatctttctctatgctccaagatgcagag
gtcaagcactgccaaggcacttgggtgttttgagatcaagttatgacata
agtataacttaagaatgactttcttctcttactgaggggtagggagagta
gggaagagactacagtaacacagctgggtggctgacagggcaaaatagaa
gccttgaaaccatctgctctggatctttttaagttagagcaatgtttgga
tgctacaggagagttgatctgtttatgtgcaaaggaaatggacatcaaat
ctatgggatccaaagaaaaaatacagtttagatttctggtatgaaaccca
gctgaaataccagttatttaaatatgtctaccaaatagtacctgccacag
ctcagacctctgatactaaaatcatccagtgttttgtgaagctgtgcttc
ttctccaagcccgatgctgcactgctaagtgagaaaagactctttggttt
ctagagttcttattcaaggcattctttctctgaattttaggcagaaaatt
atttgcaaatgtggccacataaagcttaagaccaaattaagaaagaaaag
gtttggggttgttgtttgtgtttgagaggttatttcctttccaaactgga
tgctgtcattttttcaactaaaattgtaagttccattctcaatggcaact
ggacacattcttggcttctgagatgttaatgctagagtcatctatgagga
aaaattagtgagagaaatcatatttcgactttcacagataagaaagaaaa
taatcaaaaataatgctagggcattcatttcaatttctcaaattggaaat
ccatcttgtggattcagaatgtttcagatagcccacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_67694320_67695477
seq2: B6Ng01-308G12.b_47_1218

seq1  GAATTCCTTAGAGAAAATGGGGCTGAACTTATGAATTTGTACTTTCTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAGAGAAAATGGGGCTGAACTTATGAATTTGTACTTTCTTTA  50

seq1  AAAGTTAGCTGAAGTTTACGGGGCTGTGTGTTGGACAGTCTCTTTTTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTAGCTGAAGTTTACGGGGCTGTGTGTTGGACAGTCTCTTTTTATC  100

seq1  GTATTAAATAAATCAAGCCATCTGACAAGGTTCTTGAAGTTTTGGGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAAATAAATCAAGCCATCTGACAAGGTTCTTGAAGTTTTGGGAAAT  150

seq1  TAGAACTCTCAGTTAATTTTTCTTGAAAAAAAATTCACCTAAGTTCTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTCTCAGTTAATTTTTCTTGAAAAAAAATTCACCTAAGTTCTGAG  200

seq1  TCTGATGGTCACATCCTTGTGCGTTACTGCTCAGACTCTTCTTGAAGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGGTCACATCCTTGTGCGTTACTGCTCAGACTCTTCTTGAAGTGC  250

seq1  AGAGCACTGGCAAGTGCACAGAGGCCTTCCATAGACTGTAAAGTTTCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACTGGCAAGTGCACAGAGGCCTTCCATAGACTGTAAAGTTTCCCC  300

seq1  ACCATAGCAGGGGAAGAAACACACATCCCCGGGCAGAATCAAACATTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAGCAGGGGAAGAAACACACATCCCCGGGCAGAATCAAACATTTGG  350

seq1  TTTTACTGCTGTGGGAGAGTCTTCACACTTACTATTTTCTTTCTTTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTGCTGTGGGAGAGTCTTCACACTTACTATTTTCTTTCTTTTCTT  400

seq1  CCTCCTATTTTCCTCTTATGTTTCATCTTTGCATTTCATGCAGCACAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTATTTTCCTCTTATGTTTCATCTTTGCATTTCATGCAGCACAATA  450

seq1  AGCTTTGTGCTTTCACAAAACAATGAAATATAAGGGGTGCAAAAGAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGTGCTTTCACAAAACAATGAAATATAAGGGGTGCAAAAGAAAGC  500

seq1  AATTCCCTTCATTCTTAGCAATTGATAGAGAGTACTTAGAACCCAGACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCTTCATTCTTAGCAATTGATAGAGAGTACTTAGAACCCAGACCC  550

seq1  TCACATGAATTACTGGCAGAGAATATGTTTGCATCTATTGCCAACTTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGAATTACTGGCAGAGAATATGTTTGCATCTATTGCCAACTTGAC  600

seq1  ACCAAAACCCATGAATGAAGTGTGATGCTTTTCCCTTTCCTCGGGTATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAACCCATGAATGAAGTGTGATGCTTTTCCCTTTCCTCGGGTATTA  650

seq1  AAGAGGATTGAAGTGCTATTATGTAGCTCTCTTTCATTCATCTCTATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGATTGAAGTGCTATTATGTAGCTCTCTTTCATTCATCTCTATTTA  700

seq1  TCTGAATAGGAAAATGATTTTATTGAATTGTGGTTGCACATATGGCAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATAGGAAAATGATTTTATTGAATTGTGGTTGCACATATGGCAAGT  750

seq1  GTTATTTTTCTGGATTGCTGGCAGTGAAATGCAACGCAAAAACAGAGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTTTCTGGATTGCTGGCAGTGAAATGCAACGCAAAAACAGAGCAG  800

seq1  GGTTAAAAGCACAGACACCGTGTTCTCTTTCCAGGACGGGATGCCATTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAAAGCACAGACACCGTGTTCTCTTTCCAGGACGGGATGCCATTCA  850

seq1  GAGTAAGCCATACTGACTGCAAAGATCCTCCAGGTCTTCTCTGGACCCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAGCCATACTGACTGCAAAGATCCTCCAGGTCTTCTCTGGACCCAT  900

seq1  GTTCTTACAGCCACATTGCAGAGGCATGAGAGATGCATTTCTGAA-CCTC  949
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTTCTTACAGCCACATTGCAGAGGCATGAGAGATGCATTTCTGAACCCTC  950

seq1  ACTGTGAAAAGGCTGTGACTTCATTTGGCCAAGATAGCAGTGACACTTTG  999
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACTGTGAAAAGGCTGTGACTTCATTTGGCCCAGATAGCAGTGACACTTTG  1000

seq1  CTACTTTGGAAATAATCACCTAAGATCTCATTT-ATTA-TTTCAC-TCTT  1046
      ||||||||||||||||||||||||||||||||| |||| |||||| ||||
seq2  CTACTTTGGAAATAATCACCTAAGATCTCATTTAATTATTTTCACTTCTT  1050

seq1  ACTTATATATCTAT-CCTAA-CCAAGGGCA-TAAACAACACTAGCATG-C  1092
      || ||||||||||| ||||| ||||||||| ||||||||||||||||| |
seq2  AC-TATATATCTATCCCTAACCCAAGGGCATTAAACAACACTAGCATGCC  1099

seq1  AGT-AGGAAAAAA--GTCCATGTGGAT-GAGAG-TCCAGAGGGCTGAAAT  1137
      ||| |||||||||  ||| |||  ||| || || |||||| |||   |||
seq2  AGTAAGGAAAAAAAGGTCAATGCTGATGGAAAGTTCCAGAAGGCCTGAAT  1149

seq1  CCTCCTAG-ATGT-GCCAGCTCT  1158
      |||||||| ||||  ||||||||
seq2  CCTCCTAGAATGTCTCCAGCTCT  1172


seq1: chr1_67873231_67874371
seq2: B6Ng01-308G12.g_67_1203 (reverse)

seq1  CGTGGGCTA-CTG-AACATTCTTGAACCACAAGAATGAATTTTCAATTTT  48
      ||||||||| ||| ||||||||  | ||||||| ||| |||| ||| |||
seq2  CGTGGGCTATCTGAAACATTCTGAATCCACAAG-ATGGATTTCCAA-TTT  48

seq1  GAGAAAATGAAAATGAATG-CCTAGCATTA-TTTTGATTATTTTCTTTCT  96
      |||||| || ||||||||| |||||||||| |||||||||||||||||||
seq2  GAGAAATTG-AAATGAATGCCCTAGCATTATTTTTGATTATTTTCTTTCT  97

seq1  TATTCTTGTGAAAGTCCGAATATGATTTCTCTCACTAATTTTTTCCTCAT  146
      |||   ||||||||||  |||||||||||||||||||| |||||||||||
seq2  TAT--CTGTGAAAGTCGAAATATGATTTCTCTCACTAA-TTTTTCCTCAT  144

seq1  AGATGACTCTAGCATTAACAATCTCAGAAGCCAAGAATGTTGTCCAGTTG  196
      ||||||||||||||||||| ||||||||||||||||||| ||||||||||
seq2  AGATGACTCTAGCATTAAC-ATCTCAGAAGCCAAGAATG-TGTCCAGTTG  192

seq1  CCATTGAGAATGGGAACTTACAATTTTAGTTG-AAAAATGACAGCATCCA  245
      ||||||||||| |||||||||||||||||||| |||||||||||||||||
seq2  CCATTGAGAAT-GGAACTTACAATTTTAGTTGAAAAAATGACAGCATCCA  241

seq1  GTTTGGAAAGGAAATAACCTCTCAAACACAAACAACAACCCCAAACCTTT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGAAAGGAAATAACCTCTCAAACACAAACAACAACCCCAAACCTTT  291

seq1  TCTTTCTTAATTTGGTCTTAAGCTTTATGTGGCCACATTTGCAAATAATT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTAATTTGGTCTTAAGCTTTATGTGGCCACATTTGCAAATAATT  341

seq1  TTCTGCCTAAAATTCAGAGAAAGAATGCCTTGAATAAGAACTCTAGAAAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCTAAAATTCAGAGAAAGAATGCCTTGAATAAGAACTCTAGAAAC  391

seq1  CAAAGAGTCTTTTCTCACTTAGCAGTGCAGCATCGGGCTTGGAGAAGAAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGTCTTTTCTCACTTAGCAGTGCAGCATCGGGCTTGGAGAAGAAG  441

seq1  CACAGCTTCACAAAACACTGGATGATTTTAGTATCAGAGGTCTGAGCTGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTTCACAAAACACTGGATGATTTTAGTATCAGAGGTCTGAGCTGT  491

seq1  GGCAGGTACTATTTGGTAGACATATTTAAATAACTGGTATTTCAGCTGGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTACTATTTGGTAGACATATTTAAATAACTGGTATTTCAGCTGGG  541

seq1  TTTCATACCAGAAATCTAAACTGTATTTTTTCTTTGGATCCCATAGATTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATACCAGAAATCTAAACTGTATTTTTTCTTTGGATCCCATAGATTT  591

seq1  GATGTCCATTTCCTTTGCACATAAACAGATCAACTCTCCTGTAGCATCCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCCATTTCCTTTGCACATAAACAGATCAACTCTCCTGTAGCATCCA  641

seq1  AACATTGCTCTAACTTAAAAAGATCCAGAGCAGATGGTTTCAAGGCTTCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGCTCTAACTTAAAAAGATCCAGAGCAGATGGTTTCAAGGCTTCT  691

seq1  ATTTTGCCCTGTCAGCCACCCAGCTGTGTTACTGTAGTCTCTTCCCTACT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCCCTGTCAGCCACCCAGCTGTGTTACTGTAGTCTCTTCCCTACT  741

seq1  CTCCCTACCCCTCAGTAAGAGAAGAAAGTCATTCTTAAGTTATACTTATG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTACCCCTCAGTAAGAGAAGAAAGTCATTCTTAAGTTATACTTATG  791

seq1  TCATAACTTGATCTCAAAACACCCAAGTGCCTTGGCAGTGCTTGACCTCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAACTTGATCTCAAAACACCCAAGTGCCTTGGCAGTGCTTGACCTCT  841

seq1  GCATCTTGGAGCATAGAGAAAGATTAATAAATAGCCTTGTGTAGCAGAGT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTGGAGCATAGAGAAAGATTAATAAATAGCCTTGTGTAGCAGAGT  891

seq1  AAACAAGGGCTATCTTTTTTTATTGCACCACTCAAATTGCGATAATTTTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGGGCTATCTTTTTTTATTGCACCACTCAAATTGCGATAATTTTC  941

seq1  CATAACTATCCTTTTTCTCCTCAGTAAAGGAAGCACTCATCATTTTACCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACTATCCTTTTTCTCCTCAGTAAAGGAAGCACTCATCATTTTACCT  991

seq1  TATGAGCATCCTACCTGTAAGGTTTTACTGACATCGTTCTCAATGCCCAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGCATCCTACCTGTAAGGTTTTACTGACATCGTTCTCAATGCCCAT  1041

seq1  TGCTATTTTTCTCATTGAATGGCTTTTAAACTTGCCTTAGTCCCTACTCC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTTTTCTCATTGAATGGCTTTTAAACTTGCCTTAGTCCCTACTCC  1091

seq1  GTGTCTCACATGCTCAAATGCTCTGTCATTATCATTCTTAGAATTC  1141
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCACATGCTCAAATGCTCTGTCATTATCATTCTTAGAATTC  1137


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