BAC Information

Click to search

BAC

Clone NameB6Ng01-310O14
Chromosome1 (Build37)
Map Location 150,573,818 - 150,574,990
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792, LOC435647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310O14.bB6Ng01-310O14.g
ACCGA102763GA102764
length1,1791,164
definitionB6Ng01-310O14.b B6Ng01-310O14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaacatgggttcattggaagagcaggtagtgctccaaaccactg
aaactcaccagccctttggtttatgtttatttgacttctgaaacaaatta
ccatcatagatagtttgaagcaatgcctatatttcttttctgtgaatttg
aactgaccactagtgaccaatagaacacagtaaaaaataacactatttta
tcatcactgataggttagtgaaagctgcctaattctcatttttgataaag
ataataaatattgagattacttactagaatttattgtttcatccctgtct
aaaaggcctcatattcaatcaccatgctaggaaaagacctatagagcaga
actgagcacatgtgagcacttcagttaatgtctgaggttaaacctactaa
catttggttatcactttcatgataatttataggttgagtatacagatttc
ccaatgcacaggcataaaagacactagtcccccatcttccaacctgagtt
ctaggtatcttaaactacagaatactatctcttccatagtatcccattcc
accccaaatgcaaactcgtagtaaacatagcatcttggaattctatgcac
ttcagttctgaggttacaggagatatagaaacaatagggaagacaagttt
tacccaatggccttttgtgacatttttgtggtgcatacactttattgaac
tttattttttattaagtatcactatagaaacaaatctctgaggctattta
tgagggtttatttataagagatggattaaggttgaaaaaccaaatgaatt
aagggtggaaagccatactaaatgttgtcagcactattctatgttcgatg
gtcccaaactgagtaaaactgataaactgagataaacagaagcatccatc
tctctgcttcctgacagtaggcacacgaggtgttctcttccttctgctcc
gtcatccctaggaaccatagcatactcagaataaacctttcccttcctcc
agttgctttctccagtgtttttaccatggtacaattcagtaactaatata
agctaaatagaagagctgttttatataacaagcctagccagcagtctccc
aacatcttttaatcatctattccctattcttctgtcagttatttttaggt
ttaagcctctactaattttaagccttatg

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgcccggggcccagcaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaggagctaaagggatctgcacctata
gtgacacatatgagctaccagtaccccgagctctgactctagctgcatat
attattcaaagatgctagtcgtcatcactggaaaagagagtccaatgact
gcactttatatgcagtcagggaatcagccaaaggggatggtggcacgagg
cgaatggtggatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150573818_150574990
seq2: B6Ng01-310O14.b_49_1227

seq1  GAATTCTAACATGGGTTCATTGGAAGAGCAGGTAGTGCTCCAAACCACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACATGGGTTCATTGGAAGAGCAGGTAGTGCTCCAAACCACTG  50

seq1  AAACTCACCAGCCCTTTGGTTTATGTTTATTTGACTTCTGAAACAAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCACCAGCCCTTTGGTTTATGTTTATTTGACTTCTGAAACAAATTA  100

seq1  CCATCATAGATAGTTTGAAGCAATGCCTATATTTCTTTTCTGTGAATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATAGATAGTTTGAAGCAATGCCTATATTTCTTTTCTGTGAATTTG  150

seq1  AACTGACCACTAGTGACCAATAGAACACAGTAAAAAATAACACTATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACCACTAGTGACCAATAGAACACAGTAAAAAATAACACTATTTTA  200

seq1  TCATCACTGATAGGTTAGTGAAAGCTGCCTAATTCTCATTTTTGATAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACTGATAGGTTAGTGAAAGCTGCCTAATTCTCATTTTTGATAAAG  250

seq1  ATAATAAATATTGAGATTACTTACTAGAATTTATTGTTTCATCCCTGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAATATTGAGATTACTTACTAGAATTTATTGTTTCATCCCTGTCT  300

seq1  AAAAGGCCTCATATTCAATCACCATGCTAGGAAAAGACCTATAGAGCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCCTCATATTCAATCACCATGCTAGGAAAAGACCTATAGAGCAGA  350

seq1  ACTGAGCACATGTGAGCACTTCAGTTAATGTCTGAGGTTAAACCTACTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCACATGTGAGCACTTCAGTTAATGTCTGAGGTTAAACCTACTAA  400

seq1  CATTTGGTTATCACTTTCATGATAATTTATAGGTTGAGTATACAGATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGTTATCACTTTCATGATAATTTATAGGTTGAGTATACAGATTTC  450

seq1  CCAATGCACAGGCATAAAAGACACTAGTCCCCCATCTTCCAACCTGAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGCACAGGCATAAAAGACACTAGTCCCCCATCTTCCAACCTGAGTT  500

seq1  CTAGGTATCTTAAACTACAGAATACTATCTCTTCCATAGTATCCCATTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTATCTTAAACTACAGAATACTATCTCTTCCATAGTATCCCATTCC  550

seq1  ACCCCAAATGCAAACTCGTAGTAAACATAGCATCTTGGAATTCTATGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAAATGCAAACTCGTAGTAAACATAGCATCTTGGAATTCTATGCAC  600

seq1  TTCAGTTCTGAGGTTACAGGAGATATAGAAACAATAGGGAAGACAAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTCTGAGGTTACAGGAGATATAGAAACAATAGGGAAGACAAGTTT  650

seq1  TACCCAATGGCCTTTTGTGACATTTTTGTGGTGCATACACTTTATTGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAATGGCCTTTTGTGACATTTTTGTGGTGCATACACTTTATTGAAC  700

seq1  TTTATTTTTTATTAAGTATCACTATAGAAACAAATCTCTGAGGCTATTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTTATTAAGTATCACTATAGAAACAAATCTCTGAGGCTATTTA  750

seq1  TGAGGGTTTATTTATAAGAGATGGATTAAGGTTGAAAAACCAAATGAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTTTATTTATAAGAGATGGATTAAGGTTGAAAAACCAAATGAATT  800

seq1  AAGGGTGGAAAGCCATACTAAATGTTGTCAGCACTATTCTATGTTCGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTGGAAAGCCATACTAAATGTTGTCAGCACTATTCTATGTTCGATG  850

seq1  GTCCCAAACTGAGTAAAACTGATAAACTGAGATAAACAGAAGCATCCATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAAACTGAGTAAAACTGATAAACTGAGATAAACAGAAGCATCCATC  900

seq1  TCTCTGCTTCCTGACAGTAGGCACACGAGGTGTTCTCTTCCTTCTGCTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCTTCCTGACAGTAGGCACACGAGGTGTTCTCTTCCTTCTGCTCC  950

seq1  GTCATCCCTAGGAACCATAGCATAACTCAGAATAAACC-TTCCCTTCCTC  999
      ||||||||||||||||||||||| |||||||||||||| |||||||||||
seq2  GTCATCCCTAGGAACCATAGCAT-ACTCAGAATAAACCTTTCCCTTCCTC  999

seq1  CAGTTGCTTTCTCCAGGTGTTTTACCATGGTACCAATTCAGGTAACTAAT  1049
      ||||||||||||||||   ||||||||||||| ||||||| |||||||||
seq2  CAGTTGCTTTCTCCAGTGTTTTTACCATGGTA-CAATTCA-GTAACTAAT  1047

seq1  AT-AGCT-AATAGAGAGGCTG-TTTATATA--CAGCCTAGCCAGCAGTCT  1094
      || |||| ||||||   |||| ||||||||   |||||||||||||||||
seq2  ATAAGCTAAATAGAAGAGCTGTTTTATATAACAAGCCTAGCCAGCAGTCT  1097

seq1  CCCAACATCTTTTAATCATCTAT--CCTATTCTTCTGTCAGTTTATTTTT  1142
      |||||||||||||||||||||||  |||||||||||||||| ||||||||
seq2  CCCAACATCTTTTAATCATCTATTCCCTATTCTTCTGTCAG-TTATTTTT  1146

seq1  AAGTTTAAG-CTCTACTATATTTTAG-CTTATG  1173
      | ||||||| ||||||||  ||| || ||||||
seq2  AGGTTTAAGCCTCTACTAATTTTAAGCCTTATG  1179


| Home | SequenceCutter | Blast | Download |