BAC Information

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BAC

Clone NameB6Ng01-310P17
Chromosome1 (Build37)
Map Location 126,191,824 - 126,192,978
singlet/doubletsinglet
Overlap genenone
Upstream geneDpp10
Downstream geneLOC666998
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310P17.bB6Ng01-310P17.g
ACCGA102813GA102814
length1,2101,153
definitionB6Ng01-310P17.b B6Ng01-310P17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggccaatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaacagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagccacaaataatataaaatatctcggcg
tgactctaacgaaggaagtgaaagatctgtatgataaaaacttcaagtcc
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggaccaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccattaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
gaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtggaccaatggaatagaattgaaga
cccaaaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ccaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactgggttgttatcatgtagaagaatgcgaatcgatccatacttat
ctccttgtactaaggtcaaatctaagtggatcagaacttcacataaaacc
agagacactggaactatagagggagaagtggggaaaagcctgaagatatg
gcacagggtaaaaatcctgaacagaacagccattggctgtgcctgagatt
cgaattgacaaatggcaactaatgaactccaaggcttctgccaagggcca
aaagaaaaca
gaattcttttccccatcgtactcattgctattgtttagttttataataaa
attttatgtatgtatgaaggtattattttgccctcataatgaaatatttt
gatgtcaagttgctgggtgacaagagagtcttatcgcagttgtgttagga
gttatatgagtgaaatgaaatgagaaactttagctcgctctcctcaccat
tgtactgatttgaatttatcaaattgttattagttggttttacccttgag
gagatggctgttgtgctgcagaggtaccttctgttcgacatgtctgagtc
tctgatgcttaccacagtgtctcacatcatgtcagcattctgtgtgtacc
acgacagtatgcatgcacacatgaatgaatgcatatgaacaaacacacac
aggaacatggaaaaaaaaggtagggagaagtcatcttttctcagtctaat
cttttattgttgacttgtatttaatcttacactggtctttgctgctatct
aaccctcaaagctgtgagaacataattgtacacacattacataatgtata
atttactattcaggttttaagataactctgtttagtggggctggagatag
ttcagtgaataaatgtgtttgctgctgactctgatgcgctgtatccaatc
actgagactcagatggtagaaggagacaattaactcagctagtggtcctc
tgaagctcacacgtgtgcatgcaccatggtgcactcattctctcaggatc
gttgaaatattctttaaaatacaaaacttgcattccataaaaatatcctt
tttacttgcagtgtgaaacggagtttagtatattgtcaggatgttgtaca
agattttcagcatttagaaaagaaaaactgcacccactttaccatcccca
ttcctctgctttggaaaagcactaacttcagtctatcgctagattttgga
cactttatatgaatgggttcttgtcctgagtggtctttcaataagtgctt
tatgtagcattattttttcaaggtaagccctgtgtatccatacatccagc
ttaaaaaaagactaaccttctccacttggggggagaatgatcaacaagtt
ttgtagaatatcagttaaagcattaaggttacctggtatttttagttatg
act
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_126191824_126192978
seq2: B6Ng01-310P17.g_68_1220 (reverse)

seq1  AGTCATATACTAAAAAATTACAAGTAACCTAAATATTCTTTAAATGATA-  49
      ||||||| ||| ||||||  || ||||||| |  || |||||| ||||| 
seq2  AGTCATA-ACT-AAAAATACCAGGTAACCTTA--ATGCTTTAACTGATAT  46

seq1  TCTACAAAATTTGGTGGATCA-TCT-CCCCCAAGTGGAGAAGGGTTTAGT  97
      ||||||||| || || ||||| ||| |||||||||||||||||  |||||
seq2  TCTACAAAACTT-GTTGATCATTCTCCCCCCAAGTGGAGAAGG--TTAGT  93

seq1  C-TTTTTTAAGCT-GATGTATTGATACACAGGGCTTTACCTGGAAAAAT-  144
      | ||||||||||| ||||||| ||||||||||||||  | || |||||| 
seq2  CTTTTTTTAAGCTGGATGTATGGATACACAGGGCTTACCTTGAAAAAATA  143

seq1  ATGCTACATAAAGCCACTTA-TGAAAGACCACTCAGGACAAGAA-CCATT  192
      ||||||||||||| |||||| ||||||||||||||||||||||| |||||
seq2  ATGCTACATAAAG-CACTTATTGAAAGACCACTCAGGACAAGAACCCATT  192

seq1  CATATAAAGTTGTCCAAAATCTAGCGATAGACTGAAGTTAGTGCTTTTCC  242
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAAG-TGTCCAAAATCTAGCGATAGACTGAAGTTAGTGCTTTTCC  241

seq1  AAAGCAGAGGGAATGGGGATGGTAAAGTGGGTGCAGTTTTTCTTTTCTAA  292
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGA-GGAATGGGGATGGTAAAGTGGGTGCAGTTTTTCTTTTCTAA  290

seq1  ATGCTGAAAATCTTGTACAACATCCTGACAATATACTAAACTCCGTTTCA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAAAATCTTGTACAACATCCTGACAATATACTAAACTCCGTTTCA  340

seq1  CACTGCAAGTAAAAAGGATATTTTTATGGAATGCAAGTTTTGTATTTTAA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAAGTAAAAAGGATATTTTTATGGAATGCAAGTTTTGTATTTTAA  390

seq1  AGAATATTTCAACGATCCTGAGAGAATGAGTGCACCATGGTGCATGCACA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATTTCAACGATCCTGAGAGAATGAGTGCACCATGGTGCATGCACA  440

seq1  CGTGTGAGCTTCAGAGGACCACTAGCTGAGTTAATTGTCTCCTTCTACCA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGAGCTTCAGAGGACCACTAGCTGAGTTAATTGTCTCCTTCTACCA  490

seq1  TCTGAGTCTCAGTGATTGGATACAGCGCATCAGAGTCAGCAGCAAACACA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTCTCAGTGATTGGATACAGCGCATCAGAGTCAGCAGCAAACACA  540

seq1  TTTATTCACTGAACTATCTCCAGCCCCACTAAACAGAGTTATCTTAAAAC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCACTGAACTATCTCCAGCCCCACTAAACAGAGTTATCTTAAAAC  590

seq1  CTGAATAGTAAATTATACATTATGTAATGTGTGTACAATTATGTTCTCAC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATAGTAAATTATACATTATGTAATGTGTGTACAATTATGTTCTCAC  640

seq1  AGCTTTGAGGGTTAGATAGCAGCAAAGACCAGTGTAAGATTAAATACAAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGAGGGTTAGATAGCAGCAAAGACCAGTGTAAGATTAAATACAAG  690

seq1  TCAACAATAAAAGATTAGACTGAGAAAAGATGACTTCTCCCTACCTTTTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAATAAAAGATTAGACTGAGAAAAGATGACTTCTCCCTACCTTTTT  740

seq1  TTTCCATGTTCCTGTGTGTGTTTGTTCATATGCATTCATTCATGTGTGCA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATGTTCCTGTGTGTGTTTGTTCATATGCATTCATTCATGTGTGCA  790

seq1  TGCATACTGTCGTGGTACACACAGAATGCTGACATGATGTGAGACACTGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATACTGTCGTGGTACACACAGAATGCTGACATGATGTGAGACACTGT  840

seq1  GGTAAGCATCAGAGACTCAGACATGTCGAACAGAAGGTACCTCTGCAGCA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGCATCAGAGACTCAGACATGTCGAACAGAAGGTACCTCTGCAGCA  890

seq1  CAACAGCCATCTCCTCAAGGGTAAAACCAACTAATAACAATTTGATAAAT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGCCATCTCCTCAAGGGTAAAACCAACTAATAACAATTTGATAAAT  940

seq1  TCAAATCAGTACAATGGTGAGGAGAGCGAGCTAAAGTTTCTCATTTCATT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCAGTACAATGGTGAGGAGAGCGAGCTAAAGTTTCTCATTTCATT  990

seq1  TCACTCATATAACTCCTAACACAACTGCGATAAGACTCTCTTGTCACCCA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCATATAACTCCTAACACAACTGCGATAAGACTCTCTTGTCACCCA  1040

seq1  GCAACTTGACATCAAAATATTTCATTATGAGGGCAAAATAATACCTTCAT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTGACATCAAAATATTTCATTATGAGGGCAAAATAATACCTTCAT  1090

seq1  ACATACATAAAATTTTATTATAAAACTAAACAATAGCAATGAGTACGATG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATAAAATTTTATTATAAAACTAAACAATAGCAATGAGTACGATG  1140

seq1  GGGAAAAGAATTC  1155
      |||||||||||||
seq2  GGGAAAAGAATTC  1153