BAC Information

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BAC

Clone NameB6Ng01-311K10
Chromosome1 (Build37)
Map Location 115,777,450 - 115,778,496
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311K10.bB6Ng01-311K10.g
ACCGA103316GA103317
length1,1951,037
definitionB6Ng01-311K10.b B6Ng01-311K10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatactttcccattctgttggtggtct
ttttgtcttattgacggtgtattttgccttgcagaagctttgcagtttca
tgaggtaccatttgtcaatcctagatcttgcagcacaagccattgctgtt
ctattcaggtttttttccctgtgcccatatcttcgagacttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagagaggaatgggtcgatttgca
ttcttctacatgataacaaccagttgtgccagcaccatttgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatttctgcgtcttcaattctattccattggt
ctacttgtctgttactataccagtaccatgcagtttttataacaattgat
ctgtagaacagctttaggtcaggcatggtgattccaccagaggaactttt
atccttgagaagaactcttgctatcctatgttattttttgttttgttttg
ttttttttgtttttttttgttattccagatgaacttgcagattgctcttt
ctaattcattgaagaattgagttggatatttgatgggcattgcattgaat
ctgtagagtggttttgacaagatagccatttttacaatgttgatcctgcc
aatccatgcgcatgggagatctttccattttctgaggatcttatttaatt
tctttcctcagggacttgaaagttttgattttaacagatctttcacttcc
ttagttagagtcacgccaagaatatttttatattatttgtgacttattga
gaaagggtgttggtttcctaattcttctcatcctgtttattctttggttg
taagaagaaaggcaattgattgttggagttaaattatatcagctacttca
cggaagctgtttatcagtagagagttctcttggtgtaacttcagggtcac
taatgcataaccgtgcacatatacagtccgtgaccagaagtaacg
gaattctggtgtcagtccactgttttttcttattcagtcaaggagcccag
tacatgaaatagtgccacccactttaggttggttcttcccatctcaatta
accaagcctaaaaagtccttcgcaaatgtgctaagaacattacctccttg
gtgattcttgatcctgccaatgatggacattattaatgatggatattaag
caagaaattctcaatatgtttcatgtacaacttaaagcatgaatgaggct
ttgttctcctactttgtgaggctactagagaaatgatgcccaactctcaa
agggaatgcatttttctaggcaccttatttatagataaagtgatggtttg
ggtctgaaattcctggaacttttctctttgtaacaccacatccatccacc
ttccgtgtgtaggtgcatggaggtattagaacagagggtccttagataaa
tcataaagatgaaagaagccctaatcaatccagcataatacatgtcctag
acaagccacaataacagaggttcttacaagggagggatattaggacttag
taacacacaaaggtaaggttgtctggagaccagggagaaagacacccatc
tgtaagctctcaggagaaacaaatgctcctgattctagattgcaatcttc
agaaatgtttgtatctaagtatttattatttaagacaaccagcctgtggt
tctttattgtggcaggataaaatccagggtcctccgaaagaggatctggg
ttaaattaaagagaaaatgctgcataaaattgacatcatgttacaatgtg
ggagttcttcagatcctcatacattgacttgttctacctgaagtacatag
catgtatattttgtcctattatcaccaaatgtggcagctgaactgaatgg
gatacttatgagaggagacactcagcagctgagttcaacccaggatatga
tctctgttttagacatatactccctctagttgctttagctgccctctgcg
ggcccagtgctcatagctacaagctaggcctactctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_115777450_115778496
seq2: B6Ng01-311K10.g_68_1104 (reverse)

seq1  AAGAGTAAGGGCTTAGCTTGTAGCCTATGGAGCACTGGGGCCCGGCAGAG  50
      |||||||  ||| |||||||||| |||| ||||||||||  || ||||||
seq2  AAGAGTA--GGCCTAGCTTGTAG-CTAT-GAGCACTGGG--CCCGCAGAG  44

seq1  GGCAGCTAAAAGCAACTAGAGGGAGTAATTATGTCTAAAACAGAGATCAT  100
      ||||||| |||||||||||||||||||  |||||||||||||||||||||
seq2  GGCAGCT-AAAGCAACTAGAGGGAGTA--TATGTCTAAAACAGAGATCAT  91

seq1  ATCCTGGGTTGAACTTCAGCTGCTGAGTGTCTCCTCTCATAAGTATCCCA  150
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATCCTGGGTTGAAC-TCAGCTGCTGAGTGTCTCCTCTCATAAGTATCCCA  140

seq1  TTCAGTTTCAGCTGCCACATTTGGTGATAATAGGACAAAATATACATGCT  200
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAG-TTCAGCTGCCACATTTGGTGATAATAGGACAAAATATACATGCT  189

seq1  ATGTACTTCAGGTAGAACAAGTCAATGTATGAGGATCTGAAGAACTCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACTTCAGGTAGAACAAGTCAATGTATGAGGATCTGAAGAACTCCCA  239

seq1  CATTGTAACATGATGTCAATTTTATGCAGCATTTTCTCTTTAATTTAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTAACATGATGTCAATTTTATGCAGCATTTTCTCTTTAATTTAACC  289

seq1  CAGATCCTCTTTCGGAGGACCCTGGATTTTATCCTGCCACAATAAAGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCTCTTTCGGAGGACCCTGGATTTTATCCTGCCACAATAAAGAAC  339

seq1  CACAGGCTGGTTGTCTTAAATAATAAATACTTAGATACAAACATTTCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCTGGTTGTCTTAAATAATAAATACTTAGATACAAACATTTCTGA  389

seq1  AGATTGCAATCTAGAATCAGGAGCATTTGTTTCTCCTGAG-GCTTACAGA  449
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGATTGCAATCTAGAATCAGGAGCATTTGTTTCTCCTGAGAGCTTACAGA  439

seq1  TGGGTGTCTTTCTCCCTGGTCTCCAGACAACCTTACCTTTGTGTGTTACT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTCTTTCTCCCTGGTCTCCAGACAACCTTACCTTTGTGTGTTACT  489

seq1  AAGTCCTAATATCCCTCCCTTGTAAGAACCTCTGTTATTGTGGCTTGTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTAATATCCCTCCCTTGTAAGAACCTCTGTTATTGTGGCTTGTCT  539

seq1  AGGACATGTATTATGCTGGATTGATTAGGGCTTCTTTCATCTTTATGATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATGTATTATGCTGGATTGATTAGGGCTTCTTTCATCTTTATGATT  589

seq1  TATCTAAGGACCCTCTGTTCTAATACCTCCATGCACCTACACACGGAAGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAGGACCCTCTGTTCTAATACCTCCATGCACCTACACACGGAAGG  639

seq1  TGGATGGATGTGGTGTTACAAAGAGAAAAGTTCCAGGAATTTCAGACCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGGATGTGGTGTTACAAAGAGAAAAGTTCCAGGAATTTCAGACCCA  689

seq1  AACCATCACTTTATCTATAAATAAGGTGCCTAGAAAAATGCATTCCCTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCACTTTATCTATAAATAAGGTGCCTAGAAAAATGCATTCCCTTT  739

seq1  GAGAGTTGGGCATCATTTCTCTAGTAGCCTCACAAAGTAGGAGAACAAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTGGGCATCATTTCTCTAGTAGCCTCACAAAGTAGGAGAACAAAG  789

seq1  CCTCATTCATGCTTTAAGTTGTACATGAAACATATTGAGAATTTCTTGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTCATGCTTTAAGTTGTACATGAAACATATTGAGAATTTCTTGCT  839

seq1  TAATATCCATCATTAATAATGTCCATCATTGGCAGGATCAAGAATCACCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCCATCATTAATAATGTCCATCATTGGCAGGATCAAGAATCACCA  889

seq1  AGGAGGTAATGTTCTTAGCACATTTGCGAAGGACTTTTTAGGCTTGGTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTAATGTTCTTAGCACATTTGCGAAGGACTTTTTAGGCTTGGTTA  939

seq1  ATTGAGATGGGAAGAACCAACCTAAAGTGGGTGGCACTATTTCATGTACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGATGGGAAGAACCAACCTAAAGTGGGTGGCACTATTTCATGTACT  989

seq1  GGGCTCCTTGACTGAATAAGAAAAAACAGTGGACTGACACCAGAATTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCCTTGACTGAATAAGAAAAAACAGTGGACTGACACCAGAATTC  1037