BAC Information

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BAC

Clone NameB6Ng01-311L09
Chromosome1 (Build37)
Map Location 69,129,855 - 69,266,477
singlet/doubletdoublet
Overlap geneErbb4, LOC667842
Upstream genenone
Downstream geneEG241084, Ikzf2, Spag16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311L09.bB6Ng01-311L09.g
ACCGA103362GA103363
length952152
definitionB6Ng01-311L09.b B6Ng01-311L09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,129,855 - 69,130,661)(69,266,326 - 69,266,477)
sequence
gaattctatcaatacctcaagtcctaaatactagtttatttgaactgtga
ctctttgataataataatatataatatgcatgtaaaacattatacacata
ttatatattattattatcaaatataggctaaattatcctatatatgtata
ttaataatatataatattatatattgcatatatagtattataatatgtta
tcatatataatcatatataggatagtaagcctctcatataaaatataatc
agtattttaaaacaaaacaaatgaacatttaagaatgagcacattggata
ggcatagggttgttagagtctactctgccacaggactccctgcttgggga
ggggaacacaggcagtttgactgtgcttatctcatgccagggcaagcgag
ccaggttatttggaagcaccaagacactctgggaatgagacagcacattc
tgggggtaggaaagcacagtctgagatgtgggaaagctgaagctggttgg
acctgtgatgaagccaaaacatggagttcttagactcttggacatccaag
tgccactgggagttatgaaagaacagataactgagtccaggacccatgag
ctggggaaaatatctagccatggaggcatggggtagccctggcttgtccc
atcagggagtagttgtccttagctttgtggctgcaggtttagtggcagtt
gtggctgggagttcagagaggtcttctttgggagtttaggctggaactct
gtcgacaaggctttcttcatggctcctcacagcagatcttgatgaaaaga
ggcagtccatggttctgagcagttttctttcacggcagaaaacggataca
taaaaccataacccatttctgaaggtgggcctgagatgaaataccttttg
cagagaggaatgtctgggaaggaaagctattggctatgcccctccagggc
tt

attcagtcacatggctttgttttctgttgctttatggtgacttgaaaata
ttgaatattgggagagagaatcccatgatgtttaatggattatgctcagt
gctccaatccagaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_69129855_69130661
seq2: B6Ng01-311L09.b_46_852

seq1  GAATTCTATCAATACCTCAAGTCCTAAATACTAGTTTATTTGAACTGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCAATACCTCAAGTCCTAAATACTAGTTTATTTGAACTGTGA  50

seq1  CTCTTTGATAATAATAATATATAATATGCATGTAAAACATTATACACATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGATAATAATAATATATAATATGCATGTAAAACATTATACACATA  100

seq1  TTATATATTATTATTATCAAATATAGGCTAAATTATCCTATATATGTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATTATTATTATCAAATATAGGCTAAATTATCCTATATATGTATA  150

seq1  TTAATAATATATAATATTATATATTGCATATATAGTATTATAATATGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATATATAATATTATATATTGCATATATAGTATTATAATATGTTA  200

seq1  TCATATATAATCATATATAGGATAGTAAGCCTCTCATATAAAATATAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATATAATCATATATAGGATAGTAAGCCTCTCATATAAAATATAATC  250

seq1  AGTATTTTAAAACAAAACAAATGAACATTTAAGAATGAGCACATTGGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTTAAAACAAAACAAATGAACATTTAAGAATGAGCACATTGGATA  300

seq1  GGCATAGGGTTGTTAGAGTCTACTCTGCCACAGGACTCCCTGCTTGGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGGGTTGTTAGAGTCTACTCTGCCACAGGACTCCCTGCTTGGGGA  350

seq1  GGGGAACACAGGCAGTTTGACTGTGCTTATCTCATGCCAGGGCAAGCGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAACACAGGCAGTTTGACTGTGCTTATCTCATGCCAGGGCAAGCGAG  400

seq1  CCAGGTTATTTGGAAGCACCAAGACACTCTGGGAATGAGACAGCACATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTATTTGGAAGCACCAAGACACTCTGGGAATGAGACAGCACATTC  450

seq1  TGGGGGTAGGAAAGCACAGTCTGAGATGTGGGAAAGCTGAAGCTGGTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGTAGGAAAGCACAGTCTGAGATGTGGGAAAGCTGAAGCTGGTTGG  500

seq1  ACCTGTGATGAAGCCAAAACATGGAGTTCTTAGACTCTTGGACATCCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGATGAAGCCAAAACATGGAGTTCTTAGACTCTTGGACATCCAAG  550

seq1  TGCCACTGGGAGTTATGAAAGAACAGATAACTGAGTCCAGGACCCATGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTGGGAGTTATGAAAGAACAGATAACTGAGTCCAGGACCCATGAG  600

seq1  CTGGGGAAAATATCTAGCCATGGAGGCATGGGGTAGCCCTGGCTTGTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGAAAATATCTAGCCATGGAGGCATGGGGTAGCCCTGGCTTGTCCC  650

seq1  ATCAGGGAGTAGTTGTCCTTAGCTTTGTGGCTGCAGGTTTAGTGGCAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGAGTAGTTGTCCTTAGCTTTGTGGCTGCAGGTTTAGTGGCAGTT  700

seq1  GTGGCTGGGAGTTCAGAGAGGTCTTCTTTGGGAGTTTAGGCTGGAACTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGGGAGTTCAGAGAGGTCTTCTTTGGGAGTTTAGGCTGGAACTCT  750

seq1  GTCGACAAGGCTTTCTTCATGGCTCCTCACAGCAGATCTTGATGAAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGACAAGGCTTTCTTCATGGCTCCTCACAGCAGATCTTGATGAAAAGA  800

seq1  GGCAGTC  807
      |||||||
seq2  GGCAGTC  807


seq1: chr1_69266326_69266477
seq2: B6Ng01-311L09.g_73_224 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACATTCTGGATTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACATTCTGGATTGGA  50

seq1  GCACTGAGCATAATCCATTAAACATCATGGGATTCTCTCTCCCAATATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGAGCATAATCCATTAAACATCATGGGATTCTCTCTCCCAATATTC  100

seq1  AATATTTTCAAGTCACCATAAAGCAACAGAAAACAAAGCCATGTGACTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTCAAGTCACCATAAAGCAACAGAAAACAAAGCCATGTGACTGA  150

seq1  AT  152
      ||
seq2  AT  152


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