BAC Information

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BAC

Clone NameB6Ng01-312F03
Chromosome1 (Build37)
Map Location 178,365,323 - 178,365,969
singlet/doubletsinglet
Overlap genenone
Upstream geneRgs7, Fh1, Kmo, Opn3, Chml, Wdr64, Exo1, Gm104, Pld5, B020018G12Rik
Downstream geneCep170, Sdccag8, LOC666235, Akt3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312F03.bB6Ng01-312F03.g
ACCGA103818GA103819
length1,195647
definitionB6Ng01-312F03.b B6Ng01-312F03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggccaatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaacagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagccacaaataatataaaatatctcggcg
tgactctaacgaaggaagtgaaagatctgtatgataaaaacttcaagtcc
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggaccaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccattaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggtgttgggagccgcg
cccacattcgccgttacaagatggcgctgacagctgtgttctaagtggta
aacaaataatctgcgcatatgccgagggtggttctctactccatgtgctc
tgccttccccgtgacgtcaactcggccgatgggctgcagccaatcaggga
gtgacacgtcctaggcgaaggagaattctccttaatagggacggggtttc
gttttcgctctctcttgcttcttacactcttgctcctgaagatgtaagca
ataaagttttgccgcagaagattctgggttgttgcgtctttcctggccgg
tcgtgagaacgcgtctaatacattggtgccgaatttccgggacgagaaaa
aactcggactggcgcaaggaggatccctcatcagaatcagactgcgggtt
cgcggttaataacgatccgttaagcagaactgttagagattcaacttatg
aatcgaaaccttttcaagccttggggaacggaaggaggtaccacg
gaattcttgtcagaggacactctgcccagggtagcccctgaggaggacat
catctcttcattctcttttgcaatattctttggtatccttttctcacaag
ataaaaacagcctttccaagcaaggagtgtgtgtttcaactccagtttgc
aaccatgcacacaccctgacaccccactcccagctttggaggggccccag
aagtacaaaaagtcaggagagggtcctgggttcagtgtggggtaaatggt
gaagaggcagcaccaggtccctcagcccttaggatgagatgcccccttga
gcccagcactcctttgctgcagcctacaatcacaagcagacattctttcc
acaacattgccaggatcagtggtcagtgttactccggggcccaagggcat
tctaggactccgcaagaaaaacagtgaccagatttcctcatctccatcag
ggtcttcatcatcgtcctcaccaaacactctttttgttttgttttgtttt
gttttgttttgtttctacgagacaaggtttctctgtgtagccctggctgt
cctggaactcactctgtagaccaggctggccttgaactcagagatccgcc
tgcctctgcctccggagtgctgggattaaaggcatgcacctcccccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_178365323_178365969
seq2: B6Ng01-312F03.g_65_711

seq1  GAATTCTTGTCAGAGGACACTCTGCCCAGGGTAGCCCCTGAGGAGGACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTCAGAGGACACTCTGCCCAGGGTAGCCCCTGAGGAGGACAT  50

seq1  CATCTCTTCATTCTCTTTTGCAATATTCTTTGGTATCCTTTTCTCACAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTTCATTCTCTTTTGCAATATTCTTTGGTATCCTTTTCTCACAAG  100

seq1  ATAAAAACAGCCTTTCCAAGCAAGGAGTGTGTGTTTCAACTCCAGTTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAACAGCCTTTCCAAGCAAGGAGTGTGTGTTTCAACTCCAGTTTGC  150

seq1  AACCATGCACACACCCTGACACCCCACTCCCAGCTTTGGAGGGGCCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGCACACACCCTGACACCCCACTCCCAGCTTTGGAGGGGCCCCAG  200

seq1  AAGTACAAAAAGTCAGGAGAGGGTCCTGGGTTCAGTGTGGGGTAAATGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACAAAAAGTCAGGAGAGGGTCCTGGGTTCAGTGTGGGGTAAATGGT  250

seq1  GAAGAGGCAGCACCAGGTCCCTCAGCCCTTAGGATGAGATGCCCCCTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGCAGCACCAGGTCCCTCAGCCCTTAGGATGAGATGCCCCCTTGA  300

seq1  GCCCAGCACTCCTTTGCTGCAGCCTACAATCACAAGCAGACATTCTTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCACTCCTTTGCTGCAGCCTACAATCACAAGCAGACATTCTTTCC  350

seq1  ACAACATTGCCAGGATCAGTGGTCAGTGTTACTCCGGGGCCCAAGGGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATTGCCAGGATCAGTGGTCAGTGTTACTCCGGGGCCCAAGGGCAT  400

seq1  TCTAGGACTCCGCAAGAAAAACAGTGACCAGATTTCCTCATCTCCATCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGACTCCGCAAGAAAAACAGTGACCAGATTTCCTCATCTCCATCAG  450

seq1  GGTCTTCATCATCGTCCTCACCAAACACTCTTTTTGTTTTGTTTTGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTCATCATCGTCCTCACCAAACACTCTTTTTGTTTTGTTTTGTTTT  500

seq1  GTTTTGTTTTGTTTCTACGAGACAAGGTTTCTCTGTGTAGCCCTGGCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTGTTTCTACGAGACAAGGTTTCTCTGTGTAGCCCTGGCTGT  550

seq1  CCTGGAACTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGAGATCCGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAACTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGAGATCCGCC  600

seq1  TGCCTCTGCCTCCGGAGTGCTGGGATTAAAGGCATGCACCTCCCCCC  647
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGCCTCCGGAGTGCTGGGATTAAAGGCATGCACCTCCCCCC  647