BAC Information

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BAC

Clone NameB6Ng01-312H21
Chromosome1 (Build37)
Map Location 121,403,008 - 121,404,102
singlet/doubletsinglet
Overlap genenone
Upstream geneClasp1, Tcfcp2l1, LOC100041753, Gli2, LOC666838, LOC100041778, Inhbb, Ralb
Downstream geneTmem185b, Epb4.1l5, Ptpn4, LOC100042447, LOC666870, LOC100041863, Tmem177, Gm101, Sctr, Tmem37, Dbi, 3110009E18Rik, Steap3, C1ql2, Marco
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312H21.bB6Ng01-312H21.g
ACCGA103947GA103948
length1,089815
definitionB6Ng01-312H21.b B6Ng01-312H21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctccacgtaaccagcagtcatgtaattagagagcactcagcctc
catgcacctctgatcccagctagccagtaggagcaatacctctagctgta
ggtacacagggctaaatgaggttacacacagagttaatgagaaaagcaca
aatgcagactaccacggtgaggggcagcagatgccatcgtgaaggctgca
gcatgtcccgacttcctcctcaggcaagcctcgatgatcagatgcaagct
tagacaataatctgtccacgcgtgaaatgacgcttcaggagacagagtca
agaattggtttaccagacaggccagaatttccctggtcttgccccctccc
acctccatgtagccccgaggctgtggcccacctttcctggagtgtgttac
agctgttcctgtcccttccacacaggatgcactgggctgtctgaaaaggc
tgatgcgtgctctactcctggaattcatgagttacactgggaccccatcc
taagagtcttgttcaaggtctagacattccaagtcccaccagagagcgac
aggcacagaaacagcactctgtgtagtgactctcgcacaggacatgtgcc
ctgctgtggaaagggtgctgagatggctcgtgacaggtctcaggtggggc
ccttgttctccatgctccttctccagggtctcagaagcaagaatatgtga
tgcccagtagggccccctgggaaccatttaacctgctgatgccatgggaa
gaaggttctagacactccctccttcagaagtacgtgctgagcaccgtggg
catcttctgtgctgtttgatgaattgttttctccccagggtgctaggtaa
cactgaacttcttatcgcctttagtgctggatccaggatgggtccttcca
gggaggaggaggaggggagcagagccagtagtgggggctcttccctccac
acaaccccagccctggggcattccctgctggggaacagtagtcagtgact
tgctccactacagtgtagtggtggtggggtacagagctttcagccacgac
ctctgctcaggcatgcaaactgcatttcgctgctcctgt
gaattctctgagcgtgtaaaagctctagaagtaatgtcaagtaatgacaa
atggaattggatcacattttaaagcttctgttcaatgaaagaaattatca
gtggagtgaagagatgctgtttgccaatgggaaatctgacccgattaata
tctagatgggacaaaacaaaatatccacttagtaaataagcaaataagtt
gaactaacagttctcaaaagaagaaacacaaatagccaatggatatatga
aaaaaggttcaacatcctttagttattagggaaatgaaaagtaaaacttg
tttgtcattttatctcattctgctcagaatggccatcctcaagaaactag
ataagaaatgatggtgaggatatgggaaaagtggagcctttattcacgtc
ttctgagaatatgaatcgttacagtctctgtgaaaatcagtatgtgggtt
ccttgaatattaaactaccacgtgacccagctattccacagattaatata
tactttaaccacttgatgccagttcaatatatcacagatatgcttacatt
ttattgttattttgttaatatattattaataaatgtacattattatattt
attattgctatactgtttacaatagcccagatatggaaccagcctagatg
cccatcaacagatagatagatagatagatagatagatagatagatagata
gatagatagatagatagatagaggagtgtggtgcatatatacaatgaatt
cagtgtaaagaaagaatggaaaattattcatttataagaaaagttgatag
aacccgggcgtgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_121403008_121404102
seq2: B6Ng01-312H21.b_48_1136

seq1  GAATTCCTCCACGTAACCAGCAGTCATGTAATTAGAGAGCACTCAGCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCACGTAACCAGCAGTCATGTAATTAGAGAGCACTCAGCCTC  50

seq1  CATGCACCTCTGATCCCAGCTAGCCAGTAGGAGCAATACCTCTAGCTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACCTCTGATCCCAGCTAGCCAGTAGGAGCAATACCTCTAGCTGTA  100

seq1  GGTACACAGGGCTAAATGAGGTTACACACAGAGTTAATGAGAAAAGCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACACAGGGCTAAATGAGGTTACACACAGAGTTAATGAGAAAAGCACA  150

seq1  AATGCAGACTACCACGGTGAGGGGCAGCAGATGCCATCGTGAAGGCTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGACTACCACGGTGAGGGGCAGCAGATGCCATCGTGAAGGCTGCA  200

seq1  GCATGTCCCGACTTCCTCCTCAGGCAAGCCTCGATGATCAGATGCAAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTCCCGACTTCCTCCTCAGGCAAGCCTCGATGATCAGATGCAAGCT  250

seq1  TAGACAATAATCTGTCCACGCGTGAAATGACGCTTCAGGAGACAGAGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAATAATCTGTCCACGCGTGAAATGACGCTTCAGGAGACAGAGTCA  300

seq1  AGAATTGGTTTACCAGACAGGCCAGAATTTCCCTGGTCTTGCCCCCTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGGTTTACCAGACAGGCCAGAATTTCCCTGGTCTTGCCCCCTCCC  350

seq1  ACCTCCATGTAGCCCCGAGGCTGTGGCCCACCTTTCCTGGAGTGTGTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCATGTAGCCCCGAGGCTGTGGCCCACCTTTCCTGGAGTGTGTTAC  400

seq1  AGCTGTTCCTGTCCCTTCCACACAGGATGCACTGGGCTGTCTGAAAAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTCCTGTCCCTTCCACACAGGATGCACTGGGCTGTCTGAAAAGGC  450

seq1  TGATGCGTGCTCTACTCCTGGAATTCATGAGTTACACTGGGACCCCATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCGTGCTCTACTCCTGGAATTCATGAGTTACACTGGGACCCCATCC  500

seq1  TAAGAGTCTTGTTCAAGGTCTAGACATTCCAAGTCCCACCAGAGAGCGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTCTTGTTCAAGGTCTAGACATTCCAAGTCCCACCAGAGAGCGAC  550

seq1  AGGCACAGAAACAGCACTCTGTGTAGTGACTCTCGCACAGGACATGTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACAGAAACAGCACTCTGTGTAGTGACTCTCGCACAGGACATGTGCC  600

seq1  CTGCTGTGGAAAGGGTGCTGAGATGGCTCGTGACAGGTCTCAGGTGGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTGGAAAGGGTGCTGAGATGGCTCGTGACAGGTCTCAGGTGGGGC  650

seq1  CCTTGTTCTCCATGCTCCTTCTCCAGGGTCTCAGAAGCAAGAATATGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTCTCCATGCTCCTTCTCCAGGGTCTCAGAAGCAAGAATATGTGA  700

seq1  TGCCCAGTAGGGCCCCCTGGGAACCATTTAACCTGCTGATGCCATGGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGTAGGGCCCCCTGGGAACCATTTAACCTGCTGATGCCATGGGAA  750

seq1  GAAGGTTCTAGACACTCCCTCCTTCAGAAGTACGTGCTGAGCACCGTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTCTAGACACTCCCTCCTTCAGAAGTACGTGCTGAGCACCGTGGG  800

seq1  CATCTTCTGTGCTGTTTGATGAATTGTTTTCTCCCCAGGGTGCTAGGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCTGTGCTGTTTGATGAATTGTTTTCTCCCCAGGGTGCTAGGTAA  850

seq1  CACTGAACTTCTTATCGCCTTTAGTGCTGGATCCAGGATGGGTCCTTCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAACTTCTTATCGCCTTTAGTGCTGGATCCAGGATGGGTCCTTCCA  900

seq1  GGGAGGAGGAGGAGGGGAGCAGAGCCAGTAGTGGGGGCTCTTCCCTCCAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAGGAGGAGGGGAGCAGAGCCAGTAGTGGGGGCTCTTCCCTCCAC  950

seq1  ACAACCCCAGCCCTGGGGCATTCCCTGCTGGGGAACAGTAGTCAGTGACT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACAACCCCAGCCCTGGGGCATTCCCTGCTGGGGAACAGTAGTCAGTGAC-  999

seq1  TTGCTCCACTACAGTGGTAGTGGTGGT-GGGTACAGGAGCCTTTCAGCCA  1049
      ||||||||||||||| ||||||||||| ||||||| ||| ||||||||||
seq2  TTGCTCCACTACAGT-GTAGTGGTGGTGGGGTACA-GAG-CTTTCAGCCA  1046

seq1  CGACTTCGTGCCCAGCCATGCAAACTGGCATTTCGGCTGCTCCTGT  1095
      |||| || ||| ||| |||||||||| ||||||| |||||||||||
seq2  CGACCTC-TGCTCAGGCATGCAAACT-GCATTTC-GCTGCTCCTGT  1089