BAC Information

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BAC

Clone NameB6Ng01-312K06
Chromosome1 (Build37)
Map Location 46,985,403 - 46,986,151
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC670603, EG227054, LOC100042453, EG212225, Dnahc7b, LOC666855, Slc39a10
Downstream geneEG227061, LOC666869
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312K06.bB6Ng01-312K06.g
ACCGA104059GA104060
length7531,178
definitionB6Ng01-312K06.b B6Ng01-312K06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcagctctaagtaaatctaattttagctttatttccattgtgt
tgcttgacatatatattatttatatcaacaaaatttctgatgtgataaac
atcacttattttctcaatgacattgtatcacttttctgtttctgtgtgaa
agtaccatcaccaagtcaacttatagaatgtgtttaattgggagagggat
aggtgtctgtaaggcaggatccatggcagcaaaatgtgagttagcatctt
gagccagaaagccaaaagagagaaataggaatgttgcttcaaactctcta
aactctcaaagtttgcataaagggaagtactttcttcaacaaggccatat
ctaagcctacccagccagagccaccaactgtggaccaagtattctaaagc
ccaagactatggaggacactgatcatccaaaccacacaaatattacctgt
ataaaatctttgaaagtagcatattgtagagagacattttgtcttttagg
ttgtaatcattttgtcttcaggaagacgcatagtaatattaatgatgtgt
tataaagctgaatgaggaagaaggcaattagctttaatcaaagtggtgga
ataaggaagaaggcatttaactgaatcaaagtttgtggagagtaaagaga
caagacagcacatatttattatatagattttacagacaccttttatttat
gtattatttactttttctgggttgtgataaaataatatgaccatagaagt
aag

gaattcaacaccctactctcaacaacggacaggtcattgaagcagaaact
aaacagtgacactgtgaagctaatagaagttataaatcaaatgggtttaa
cagatatatacagaacatttcaccctgaaacaaaagaatatactgtttca
gcaccccacagtaccttctccaaaactgactctataagcattcactaaac
aaacctcaacagatacaagatttaaataaccccatgtatcctaatagatc
accacagactaaaactagactacaatagcaacaaaaacaggaagcccaca
tacccaaggaaactgaacaactctctaatcaatgataacttggtcaggga
gaaaagaaagaatttaaggaatttctaaaattcaatgaaaatacacagca
tacccaaacttatgggacaaaatgaaagcagtgctaagagggaaattcat
agcactaagtgccctcttaaagaagaggacctctggagaggtcctacaat
agcaacttaacagcacacctgaaagccctagaagaaaaagaagcaaacac
acctaagaatcaaacttggagcagatatcatccaattagaaacagagaac
aatacaaagaatcaacaaaacctgtgggaagcctcaaacgccattacaag
atggcgctggtttctataagctgacgcccatgaatatgggtagacaacca
atgtgcgcatgtgcataagagttttatgctgagtcactgcctggcccgag
gcatattaatgaggtactggtagcataaccaatcacgtatggacacgtca
ctcctaggcctatataagcagcgccatttctgaggctcagggtctttcac
ctacgcagtccatgctctcccaataaacgtgttgcagaaggatcctgttg
tggcatcttacttgctcgcgagtcgggagttccacaaaatggtgccgaaa
cctgggaagtaacatcttcagcacgagcgaagaccccctgttacaggagg
attcagactgcatcacgaggattgagcgatgatgagtgtccgtaagcacc
tgttgagaagattcaactgcgtggattcagaactcttcagctgggaacag
ttgctacagtagtaaaggaattaatgtaaggtctctgaagagcattgcct
ttcctatatgtcagataggttctattga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_46985403_46986151
seq2: B6Ng01-312K06.b_47_799

seq1  GAATTCATCAGCTCTAAGTAAATCTAATTTTAGCTTTATTTCCATTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAGCTCTAAGTAAATCTAATTTTAGCTTTATTTCCATTGTGT  50

seq1  TGCTTGACATATATATTATTTATATCAACAAAATTTCTGATGTGATAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGACATATATATTATTTATATCAACAAAATTTCTGATGTGATAAAC  100

seq1  ATCACTTATTTTCTCAATGACATTGTATCACTTTTCTGTTTCTGTGTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTATTTTCTCAATGACATTGTATCACTTTTCTGTTTCTGTGTGAA  150

seq1  AGTACCATCACCAAGTCAACTTATAGAATGTGTTTAATTGGGAGAGGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCATCACCAAGTCAACTTATAGAATGTGTTTAATTGGGAGAGGGAT  200

seq1  AGGTGTCTGTAAGGCAGGATCCATGGCAGCAAAATGTGAGTTAGCATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTCTGTAAGGCAGGATCCATGGCAGCAAAATGTGAGTTAGCATCTT  250

seq1  GAGCCAGAAAGCCAAAAGAGAGAAATAGGAATGTTGCTTCAAACTCTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGAAAGCCAAAAGAGAGAAATAGGAATGTTGCTTCAAACTCTCTA  300

seq1  AACTCTCAAAGTTTGCATAAAGGGAAGTACTTTCTTCAACAAGGCCATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCAAAGTTTGCATAAAGGGAAGTACTTTCTTCAACAAGGCCATAT  350

seq1  CTAAGCCTACCCAGCCAGAGCCACCAACTGTGGACCAAGTATTCTAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCCTACCCAGCCAGAGCCACCAACTGTGGACCAAGTATTCTAAAGC  400

seq1  CCAAGACTATGGAGGACACTGATCATCCAAACCACACAAATATTACCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGACTATGGAGGACACTGATCATCCAAACCACACAAATATTACCTGT  450

seq1  ATAAAATCTTTGAAAGTAGCATATTGTAGAGAGACATTTTGTCTTTTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATCTTTGAAAGTAGCATATTGTAGAGAGACATTTTGTCTTTTAGG  500

seq1  TTGTAATCATTTTGTCTTCAGGAAGACGCATAGTAATATTAATGATGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATCATTTTGTCTTCAGGAAGACGCATAGTAATATTAATGATGTGT  550

seq1  TATAAAGCTGAATGAGGAAGAAGGCAATTAGC-TTAATCAAAGTGGTGGA  599
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TATAAAGCTGAATGAGGAAGAAGGCAATTAGCTTTAATCAAAGTGGTGGA  600

seq1  ATAAGGAAGAAGGCAATTAACTGAATCAAAG-TTGTGGAGAGTAAAGAGA  648
      ||||||||||||||| ||||||||||||||| ||||||||||||||||||
seq2  ATAAGGAAGAAGGCATTTAACTGAATCAAAGTTTGTGGAGAGTAAAGAGA  650

seq1  CAAGACAGCACATATTTATTATATAGATTTTACAGACACC-TTTATTTAT  697
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CAAGACAGCACATATTTATTATATAGATTTTACAGACACCTTTTATTTAT  700

seq1  GTATTATTTAC-TTTTCTGGGTTGTGATAAAATAATATGACCATAGAAGT  746
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTATTATTTACTTTTTCTGGGTTGTGATAAAATAATATGACCATAGAAGT  750

seq1  AAG  749
      |||
seq2  AAG  753


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