BAC Information

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BAC

Clone NameB6Ng01-312M06
Chromosome1 (Build37)
Map Location 70,916,703 - 71,043,152
singlet/doubletdoublet
Overlap geneA830006F12Rik, EG667884, EG666083, LOC100042804, LOC100042809
Upstream geneSpag16, LOC100043210
Downstream geneBard1, LOC667900, Abca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528, LOC675667, EG667931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312M06.bB6Ng01-312M06.g
ACCGA104155GA104156
length602500
definitionB6Ng01-312M06.b B6Ng01-312M06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,042,551 - 71,043,152)(70,916,703 - 70,917,208)
sequence
gaattcagggttatcttaagtgaagagtgacagtgctggctttacttagc
aaactattctttctgaatgttgagtaccttctccagagggagctagagga
ggaaatttttacattaattaattgattaacacatttattttattatgttt
tctttatttgcttatttagtggtaagttggtgtatgttgccacagagcac
aaattagggtcagaaaagaacttggaggcgtcaatgtcctccttccacta
catgggtttctggggtagcaagtgtctttgtataaagccgagtcatctca
ctgagccaaaccaagagattcttgatggcattatctcttcctactgtgcc
atttctatttcctgccatcaagagatttctctgtttctcaatgctttgat
tgtcattcatcagggtgcactgccctttaaaaaatgcttgagcaagaggg
agagtttacatggttcatgatgtcctgtgtacacaagttcttcagtcttg
acttctttagagtacctgcttacagtgattgtaatccctatcccacaggg
ctttgtaaaccccctctgtgtgagtgtgagtgtgtgtgtgtgtgtgtgtg
tg

ctcctcaacccttctttctagtctcccatttacccgctattctctttgcc
ttgccacacatcccagtaactaaaggatccaagttgcttgcctctactgc
agccttatcatcccaggggctgctgaaacctagaagaaatgaacaatagc
tcttgttttcaggatgcttgccttctgggttgcagcatgtagaaattgtg
atgtgtcccagatctcagtctcattggctgtgagaccttgggaaagttac
ttgacatgtttgtgtttctttgtctcaccataaacataaggaaactattc
ttgctgcaagagaaaaatagataatgcataaaagagctcttcagtatttt
aaagtcaagggacagtgtcacttgcctataattccagcacttgggaggct
gaggtatatggatttggggttgaagcccacctgggctatgtaagtatgat
cttgtctcaaaggggaaggaaggaaggaaggaaggaaggaaggaaggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_71042551_71043152
seq2: B6Ng01-312M06.b_47_648 (reverse)

seq1  CACACACACACACACACACACACTCACACTCACACAGAGGGGGTTTACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACTCACACTCACACAGAGGGGGTTTACAA  50

seq1  AGCCCTGTGGGATAGGGATTACAATCACTGTAAGCAGGTACTCTAAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGTGGGATAGGGATTACAATCACTGTAAGCAGGTACTCTAAAGAA  100

seq1  GTCAAGACTGAAGAACTTGTGTACACAGGACATCATGAACCATGTAAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGACTGAAGAACTTGTGTACACAGGACATCATGAACCATGTAAACT  150

seq1  CTCCCTCTTGCTCAAGCATTTTTTAAAGGGCAGTGCACCCTGATGAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTTGCTCAAGCATTTTTTAAAGGGCAGTGCACCCTGATGAATGA  200

seq1  CAATCAAAGCATTGAGAAACAGAGAAATCTCTTGATGGCAGGAAATAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAAAGCATTGAGAAACAGAGAAATCTCTTGATGGCAGGAAATAGAA  250

seq1  ATGGCACAGTAGGAAGAGATAATGCCATCAAGAATCTCTTGGTTTGGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCACAGTAGGAAGAGATAATGCCATCAAGAATCTCTTGGTTTGGCTC  300

seq1  AGTGAGATGACTCGGCTTTATACAAAGACACTTGCTACCCCAGAAACCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGATGACTCGGCTTTATACAAAGACACTTGCTACCCCAGAAACCCA  350

seq1  TGTAGTGGAAGGAGGACATTGACGCCTCCAAGTTCTTTTCTGACCCTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTGGAAGGAGGACATTGACGCCTCCAAGTTCTTTTCTGACCCTAAT  400

seq1  TTGTGCTCTGTGGCAACATACACCAACTTACCACTAAATAAGCAAATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTCTGTGGCAACATACACCAACTTACCACTAAATAAGCAAATAAA  450

seq1  GAAAACATAATAAAATAAATGTGTTAATCAATTAATTAATGTAAAAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACATAATAAAATAAATGTGTTAATCAATTAATTAATGTAAAAATTT  500

seq1  CCTCCTCTAGCTCCCTCTGGAGAAGGTACTCAACATTCAGAAAGAATAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCTAGCTCCCTCTGGAGAAGGTACTCAACATTCAGAAAGAATAGT  550

seq1  TTGCTAAGTAAAGCCAGCACTGTCACTCTTCACTTAAGATAACCCTGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAAGTAAAGCCAGCACTGTCACTCTTCACTTAAGATAACCCTGAAT  600

seq1  TC  602
      ||
seq2  TC  602


seq1: chr1_70916703_70917208
seq2: B6Ng01-312M06.g_69_574

seq1  GAATTCCTCCTCAACCCTTCTTTCTAGTCTCCCATTTACCCGCTATTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTCAACCCTTCTTTCTAGTCTCCCATTTACCCGCTATTCTC  50

seq1  TTTGCCTTGCCACACATCCCAGTAACTAAAGGATCCAAGTTGCTTGCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTGCCACACATCCCAGTAACTAAAGGATCCAAGTTGCTTGCCTC  100

seq1  TACTGCAGCCTTATCATCCCAGGGGCTGCTGAAACCTAGAAGAAATGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCAGCCTTATCATCCCAGGGGCTGCTGAAACCTAGAAGAAATGAAC  150

seq1  AATAGCTCTTGTTTTCAGGATGCTTGCCTTCTGGGTTGCAGCATGTAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTCTTGTTTTCAGGATGCTTGCCTTCTGGGTTGCAGCATGTAGAA  200

seq1  ATTGTGATGTGTCCCAGATCTCAGTCTCATTGGCTGTGAGACCTTGGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGATGTGTCCCAGATCTCAGTCTCATTGGCTGTGAGACCTTGGGAA  250

seq1  AGTTACTTGACATGTTTGTGTTTCTTTGTCTCACCATAAACATAAGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTTGACATGTTTGTGTTTCTTTGTCTCACCATAAACATAAGGAAA  300

seq1  CTATTCTTGCTGCAAGAGAAAAATAGATAATGCATAAAAGAGCTCTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCTTGCTGCAAGAGAAAAATAGATAATGCATAAAAGAGCTCTTCAG  350

seq1  TATTTTAAAGTCAAGGGACAGTGTCACTTGCCTATAATTCCAGCACTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAAAGTCAAGGGACAGTGTCACTTGCCTATAATTCCAGCACTTGG  400

seq1  GAGGCTGAGGTATATGGATTTGGGGTTGAAGCCCACCTGGGCTATGTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGAGGTATATGGATTTGGGGTTGAAGCCCACCTGGGCTATGTAAG  450

seq1  TATGATCTTGTCTCAAAGGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATCTTGTCTCAAAGGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA  500

seq1  AGGAAG  506
      ||||||
seq2  AGGAAG  506


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