BAC Information

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BAC

Clone NameB6Ng01-312P21
Chromosome10 (Build37)1 (Build37)
Map Location 14,545,808 - 14,545,846105,238,171 - 105,238,471
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAig1, EG666859, Hivep2, Gpr126, LOC100039571, LOC100039409, Vta1, D230044M03Rik, EG666904, Nmbr
Downstream geneLOC666917, LOC637043, LOC100039492, LOC671439
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312P21.bB6Ng01-312P21.g
ACCGA104323GA104324
length680301
definitionB6Ng01-312P21.b B6Ng01-312P21.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(14,545,808 - 14,545,846)(105,238,171 - 105,238,471)
sequence
gaattctttctttatttttgtctcccatttttaatagggttatttggttc
tctggagtctatcttcttgagttatatatatattggaaatttgccctcta
tggatataatatgggtaaaaatcttttgccaatctgttggttgtcatttt
gtcatattgacagtgtcctttgctttacagaagctttgcaatttttatga
gggcccatttgcaaattcatgatcttagagcataagccatcggtgttcta
ttcaggaaaatttcccctgtgcacatgtgttcaaggcttttcactacttt
ctcttcagggtgtctggttttatgtggaggacaatgatccacttggactt
gacatttgtacaagtaaatgagaatggataaatatgcattcttctacatg
atgaccataatgtgtaccagcacaatttgttgaaaatgctgtctttttcc
acagcttttagcttcttggtcaaaaaacaagtgaccataggttttcagat
taatttctgggtcttcaattctatcctattgatctacctgcctgtctgtg
tcccaagaccatgcagtttttaaaactattgctcagtagtacagtttgag
gtcaggatggttattcctccagatttgtttctgttgttgttgttgttgtt
gatttgtgtttttttttgggtttttttggt

tctgagccataattatatgttgatatgtgtattggtcttgttatgtttca
aagacaacgttttcttggaatcaaacaagacctctgtctcttacattcct
tctgtttaccagggatactggttttaagagcaagcaatcccccggagctc
atgtctctagctgcatatgtagcagaagatggcctagtcggccatcattg
gaaagagaggcccattggtcttgcaaactttatttgtctcagtacagggc
aacaccagggccatgaagtgggagtaggttggtagaggagttggggggag
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_14545808_14545846
seq2: B6Ng01-312P21.b_682_728 (reverse)

seq1  ACCAAAAAAACCCAAAAAAACA--------AACAACAACAACAACAA  39
      |||||||||||||||||||| |        |||||||||||||||||
seq2  ACCAAAAAAACCCAAAAAAAAACACAAATCAACAACAACAACAACAA  47


seq1: chr1_105238171_105238471
seq2: B6Ng01-312P21.g_74_374 (reverse)

seq1  TCTCCCCCCAACTCCTCTACCAACCTACTCCCACTTCATGGCCCTGGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCCCAACTCCTCTACCAACCTACTCCCACTTCATGGCCCTGGTGT  50

seq1  TGCCCTGTACTGAGACAAATAAAGTTTGCAAGACCAATGGGCCTCTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGTACTGAGACAAATAAAGTTTGCAAGACCAATGGGCCTCTCTTT  100

seq1  CCAATGATGGCCGACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGATGGCCGACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACA  150

seq1  TGAGCTCCGGGGGATTGCTTGCTCTTAAAACCAGTATCCCTGGTAAACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCCGGGGGATTGCTTGCTCTTAAAACCAGTATCCCTGGTAAACAG  200

seq1  AAGGAATGTAAGAGACAGAGGTCTTGTTTGATTCCAAGAAAACGTTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATGTAAGAGACAGAGGTCTTGTTTGATTCCAAGAAAACGTTGTCT  250

seq1  TTGAAACATAACAAGACCAATACACATATCAACATATAATTATGGCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACATAACAAGACCAATACACATATCAACATATAATTATGGCTCAG  300

seq1  A  301
      |
seq2  A  301


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