BAC Information

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BAC

Clone NameB6Ng01-313O01
Chromosome1 (Build37)
Map Location 70,730,439 - 70,730,562
singlet/doubletsinglet
Overlap geneSpag16
Upstream geneIkzf2
Downstream geneA830006F12Rik, LOC100043210, EG667884, EG666083, LOC100042804, LOC100042809, Bard1, LOC667900, Abca12, LOC629101, Atic, Fn1, LOC100042814
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313O01.bB6Ng01-313O01.g
ACCGA104967GA104968
length1,202641
definitionB6Ng01-313O01.b B6Ng01-313O01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttttcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgttgattctactttttaggtatcacagacaagata
tgaacatagtagggcataagcccctgtggtatggtggggtatcttttagg
tgttgtgccaggggaaagttactgatactagacacacacacacacacaca
cacacacacacacaccagacaggagccaatctgatgcaactcacagtagg
gtctttattctattcaagctagcccccactcccacctaaggcaccacagt
cacccagaacagttttgttgtgggggaagctcaaatgtttattggccata
atttatagcagcagcaagcatctaattggaaaaatactgtgcccttacct
aattgggctggtgcctggagtccataccatatacctaaatttcctgcctt
cccctctgccattgtggttgaagtgaaggtgggcctgttaaactgtggct
tg
gaattcatgaaattcttagacaaacagatggaactagaaaatttcaactt
tagtgaagtaacccaatcacaaaagaacaaacagtatgtactcaatgata
ggtggatgtgggtcattaggctatgcacagacagcctagtttctagttga
ggctagatgttgaaccccaggacctggtggtgataattcacctacatggg
acagaaggagttattttatgtctcctggagccctggctcctgtcaaagtt
aatgacccctcttctcccacaagagaagcgtggctagtactaatgtaggc
aatgtcccaagcttctgaccttcaggctggactcctccccagttacctaa
caagagaaaagatagcagcatattttaagaggggctgtttggcccctctc
cactctcttgctctcttgctcttactcccattactctcctttttcctctc
ctctcctctcctctcctctgctctcctctctcctctgctctcctctctct
tcctttctctccctctcactctctagcctttctcctctctctccatttcc
cctttgtctccccttggccatggccagtctctctctctctctctctctct
ctctctctctctctctctgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_70730439_70730562
seq2: B6Ng01-313O01.g_513_707 (reverse)

seq1  CACATACACACA-ACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGA  49
      |||| ||||||| ||||||||||| |||||||||||||||||||||||||
seq2  CACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGA  50

seq1  GAGAGAGGGAGA-----------------GGGAGA-----GAGAGAGAGA  77
      ||||||| ||||                 ||||||     | || |  ||
seq2  GAGAGAGAGAGAGACTGGCCATGGCCAAGGGGAGACAAAGGGGAAATGGA  100

seq1  GAGAGAAGAGAGAG---AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  124
      |||||| |||| ||   |||||| ||||| |||||| ||  |||||||| 
seq2  GAGAGAGGAGAAAGGCTAGAGAGTGAGAGGGAGAGAAAGGAAGAGAGAGG  150

seq1  ---------------------------------------------  124
                                                   
seq2  AGAGCAGAGGAGAGAGGAGAGCAGAGGAGAGGAGAGGAGAGGAGA  195