BAC Information

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BAC

Clone NameB6Ng01-314F06
Chromosome1 (Build37)
Map Location 75,535,333 - 75,674,991
singlet/doubletdoublet
Overlap geneSlc4a3, LOC100039069, LOC383531
Upstream geneUsp37, Rqcd1, Plcd4, Zfp142, Bcs1l, Rnf25, Stk36, Ttll4, Cyp27a1, Prkag3, Wnt6, Wnt10a, LOC100042901, Cdk5r2, Fev, Cryba2, Ccdc108, Ihh, Nhej1, Slc23a3, 1810031K17Rik, BC038286, Zfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik, AW822216, Inha, Stk11ip
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314F06.bB6Ng01-314F06.g
ACCGA105294GA105295
length8771,063
definitionB6Ng01-314F06.b B6Ng01-314F06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,674,336 - 75,674,991)(75,535,333 - 75,536,397)
sequence
gaattcaagagatggttccattcactcccatcctagccgtggctgtcagc
ctccttcctccgcgggattagaagctccttgaagccagaagtatctgctt
tgttcctctaatttgctcccacagctttgaaatattaaaaggtctctgtg
attatttggggaaccagctggttaaggaatacctgctgctgaattaattt
ccagcattaataacaacaacaacaataataataataataataataataat
aataataataataataattcattttgcactcatgggagatcccggaacag
ggttggcatagaatattatatccaagaaaagtaaccttatgccaacatgt
attagaagcccgcagacccatttgagaccctatctcccaagctggtgaaa
taagagtctgaaatatcccttagcaacggtttcatgtctgggagctatcc
atcccaccagtgactgaaatggttacagtcacatagatggcatccacaac
cattcagatgtgtaaaattattcttgggctggggaaatacttcagtcagc
agcaaggatctgagtcagagctccagaacctgtgggtgttttttaagatg
tatttatttttatttatacgagtacactgtagctgtcttcagacacacac
cagaagagtgcatcggaccccattacagacggttgtgagccaccatgtgg
ttgctaggaattaaactcaggacctctggaagagcagttagtgctcttaa
ccgttgagccatctctccagcccagaacctatggcttatagtgctgaatg
tggtgctgtgggctcacaccagcactgggaggcaaaaaccaacatggagt
taactgctcagccagcctagcctactt
gaattcagtcacatggtcacatgtgccagcatgctgtattttggttctgt
gtgccggcatgccatattttgcatccacccacaagggtcagtgtggtgtg
gttgtaacacgggaaggacacgggatttaggactgtgtcttagttgtatg
attcacggcttagctgtgagctagtaacgtccccttgtttgctcacctgc
agtgtggaattgagactaatcaataacttatctgcttcacagaggtgttg
agtatccgtgggagtattgtgcaaaacctcaatgcattcaataaatgctg
gctacagaatccgcctgttagttgctacatgcttctttgtcacccaggag
cctcggactgttctttgtaactggaagaatggctgcctgcttcttattgc
ctatgtgtttatgggtgaatatttccccagtgtgctttggaggaaactcg
cacacttctggaaagagcatgagtcaggacacatttctgtcttggcccat
cccttttgtcacttgatcatttgggacttggtgacttctccggcctccac
tgaaaacattccttagtttattagttactataattacctgtgcacttgct
tcacagagactcactgagctctttgggaggtgcctggctctgtgcgagga
gggatgcaggaagtcacaataggattctctttcagggtctggttatataa
ctctggtcggtcgtgaacttgagatcctcctgtctgggccttctgagtac
tgggattttggattaaaaccaacatgaagtgcacggtgtcagtgtgtaag
gacatactttgtgctttgtctgtgcactcagccttcctgtgatgttatca
cgactgtcctggggaagatctacatcttacaggtgtggcgagtgaggctg
aggttactaaggtgctctcacccttgaaccctctgtctacaagatctgag
ctgtctccttaaccatattgcctcctaagccttattggaggcccatcctt
caggatccatccagtcctttcatacggtctctggtggcaccaacgtctgg
tatttatcatatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_75674336_75674991
seq2: B6Ng01-314F06.b_44_699 (reverse)

seq1  CTTCTGGTGTGTGTCTGAAGACAGCTACAGTGTACTCGTATAAATAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGTGTGTGTCTGAAGACAGCTACAGTGTACTCGTATAAATAAAAA  50

seq1  TAAATACATCTTAAAAAACACCCACAGGTTCTGGAGCTCTGACTCAGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACATCTTAAAAAACACCCACAGGTTCTGGAGCTCTGACTCAGATC  100

seq1  CTTGCTGCTGACTGAAGTATTTCCCCAGCCCAAGAATAATTTTACACATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGCTGACTGAAGTATTTCCCCAGCCCAAGAATAATTTTACACATC  150

seq1  TGAATGGTTGTGGATGCCATCTATGTGACTGTAACCATTTCAGTCACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGTTGTGGATGCCATCTATGTGACTGTAACCATTTCAGTCACTGG  200

seq1  TGGGATGGATAGCTCCCAGACATGAAACCGTTGCTAAGGGATATTTCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGGATAGCTCCCAGACATGAAACCGTTGCTAAGGGATATTTCAGA  250

seq1  CTCTTATTTCACCAGCTTGGGAGATAGGGTCTCAAATGGGTCTGCGGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATTTCACCAGCTTGGGAGATAGGGTCTCAAATGGGTCTGCGGGCT  300

seq1  TCTAATACATGTTGGCATAAGGTTACTTTTCTTGGATATAATATTCTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATACATGTTGGCATAAGGTTACTTTTCTTGGATATAATATTCTATG  350

seq1  CCAACCCTGTTCCGGGATCTCCCATGAGTGCAAAATGAATTATTATTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCCTGTTCCGGGATCTCCCATGAGTGCAAAATGAATTATTATTATT  400

seq1  ATTATTATTATTATTATTATTATTATTATTATTGTTGTTGTTGTTATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATTATTATTATTATTATTATTATTATTGTTGTTGTTGTTATTAA  450

seq1  TGCTGGAAATTAATTCAGCAGCAGGTATTCCTTAACCAGCTGGTTCCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAAATTAATTCAGCAGCAGGTATTCCTTAACCAGCTGGTTCCCCA  500

seq1  AATAATCACAGAGACCTTTTAATATTTCAAAGCTGTGGGAGCAAATTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCACAGAGACCTTTTAATATTTCAAAGCTGTGGGAGCAAATTAGA  550

seq1  GGAACAAAGCAGATACTTCTGGCTTCAAGGAGCTTCTAATCCCGCGGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAAAGCAGATACTTCTGGCTTCAAGGAGCTTCTAATCCCGCGGAGG  600

seq1  AAGGAGGCTGACAGCCACGGCTAGGATGGGAGTGAATGGAACCATCTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGCTGACAGCCACGGCTAGGATGGGAGTGAATGGAACCATCTCTT  650

seq1  GAATTC  656
      ||||||
seq2  GAATTC  656

seq1: chr1_75535333_75536397
seq2: B6Ng01-314F06.g_67_1129

seq1  GAATTCAGTCACATGGTCACATGTGCCAGCATGCTGTATTTTGGTTCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCACATGGTCACATGTGCCAGCATGCTGTATTTTGGTTCTGT  50

seq1  GTGCCGGCATGCCATATTTTGCATCCACCCACAAGGGTCAGTGTGGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCGGCATGCCATATTTTGCATCCACCCACAAGGGTCAGTGTGGTGTG  100

seq1  GTTGTAACACGGGAAGGACACGGGATTTAGGACTGTGTCTTAGTTGTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAACACGGGAAGGACACGGGATTTAGGACTGTGTCTTAGTTGTATG  150

seq1  ATTCACGGCTTAGCTGTGAGCTAGTAACGTCCCCTTGTTTGCTCACCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACGGCTTAGCTGTGAGCTAGTAACGTCCCCTTGTTTGCTCACCTGC  200

seq1  AGTGTGGAATTGAGACTAATCAATAACTTATCTGCTTCACAGAGGTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGAATTGAGACTAATCAATAACTTATCTGCTTCACAGAGGTGTTG  250

seq1  AGTATCCGTGGGAGTATTGTGCAAAACCTCAATGCATTCAATAAATGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCCGTGGGAGTATTGTGCAAAACCTCAATGCATTCAATAAATGCTG  300

seq1  GCTACAGAATCCGCCTGTTAGTTGCTACATGCTTCTTTGTCACCCAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGAATCCGCCTGTTAGTTGCTACATGCTTCTTTGTCACCCAGGAG  350

seq1  CCTCGGACTGTTCTTTGTAACTGGAAGAATGGCTGCCTGCTTCTTATTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGACTGTTCTTTGTAACTGGAAGAATGGCTGCCTGCTTCTTATTGC  400

seq1  CTATGTGTTTATGGGTGAATATTTCCCCAGTGTGCTTTGGAGGAAACTCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGTTTATGGGTGAATATTTCCCCAGTGTGCTTTGGAGGAAACTCG  450

seq1  CACACTTCTGGAAAGAGCATGAGTCAGGACACATTTCTGTCTTGGCCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTCTGGAAAGAGCATGAGTCAGGACACATTTCTGTCTTGGCCCAT  500

seq1  CCCTTTTGTCACTTGATCATTTGGGACTTGGTGACTTCTCCGGCCTCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTGTCACTTGATCATTTGGGACTTGGTGACTTCTCCGGCCTCCAC  550

seq1  TGAAAACATTCCTTAGTTTATTAGTTACTATAATTACCTGTGCACTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACATTCCTTAGTTTATTAGTTACTATAATTACCTGTGCACTTGCT  600

seq1  TCACAGAGACTCACTGAGCTCTTTGGGAGGTGCCTGGCTCTGTGCGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAGACTCACTGAGCTCTTTGGGAGGTGCCTGGCTCTGTGCGAGGA  650

seq1  GGGATGCAGGAAGTCACAATAGGATTCTCTTTCAGGGTCTGGTTATATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCAGGAAGTCACAATAGGATTCTCTTTCAGGGTCTGGTTATATAA  700

seq1  CTCTGGTCGGTCGTGAACTTGAGATCCTCCTGTCTGGGCCTTCTGAGTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTCGGTCGTGAACTTGAGATCCTCCTGTCTGGGCCTTCTGAGTAC  750

seq1  TGGGATTTTGGATTAAAACCAACATGAAGTGCACGGTGTCAGTGTGTAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTTTGGATTAAAACCAACATGAAGTGCACGGTGTCAGTGTGTAAG  800

seq1  GACATACTTTGTGCTTTGTCTGTGCACTCAGCCTTCCTGTGATGTTATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATACTTTGTGCTTTGTCTGTGCACTCAGCCTTCCTGTGATGTTATCA  850

seq1  CGACTGTCCTGGGGAAGATCTACATCTTACAGGTGTGGCGAGTGAGGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTGTCCTGGGGAAGATCTACATCTTACAGGTGTGGCGAGTGAGGCTG  900

seq1  AGGTTACTAAGGTGCTCTCACCCTTGAACCCTCTGTCTACAAGATCTGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTACTAAGGTGCTCTCACCCTTGAACCCTCTGTCTACAAGATCTGAG  950

seq1  CTGTCTTCCTTAAACCATATTGCCTCCTAAGCCTTATGGAAGGCCCATCC  1000
      ||||| ||||| ||||||||||||||||||||||||| | ||||||||||
seq2  CTGTC-TCCTT-AACCATATTGCCTCCTAAGCCTTATTGGAGGCCCATCC  998

seq1  TTTCAGGATCCATCCAGTCCTTTCATACGGTCTCTGGTGGCACCAACGTC  1050
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTCAGGATCCATCCAGTCCTTTCATACGGTCTCTGGTGGCACCAACGTC  1047

seq1  TGGGA-TTATCATATC  1065
      ||| | ||||||||||
seq2  TGGTATTTATCATATC  1063