BAC Information

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BAC

Clone NameB6Ng01-314F20
Chromosome1 (Build37)
Map Location 150,322,904 - 150,451,673
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792, LOC435647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314F20.bB6Ng01-314F20.g
ACCGA105320GA105321
length1,1271,086
definitionB6Ng01-314F20.b B6Ng01-314F20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,450,547 - 150,451,673)(150,322,904 - 150,323,994)
sequence
gaattcagtgttttgctaaatgcgatagaaaagaaaatttattatgcaaa
aatgcaagaagtcataattataactcatgtttctccatacaaatgtgcct
agaatatcaaagtaaaaattaaaaagtgctgttgcttctgtgattaaacc
tttgcttctttgtggatcacttgagtttctttcaatcttaccaaatgcac
agtgagcagatgatgcttgacaagctattttctgttactgcaaacattct
attttaaattatgtgtgtggtactctggggagagtgagtctgatttcaca
cttgtattaaccatgtttgtttataatataaatttcaatcttttttctaa
ataaaagttgaaacaagagattaaagtgtagagtgactcaatatttacaa
actataatgccttaaacccacatcattaatcaccatattaaaaacacatt
tataattaatttggttttaataatcctcatttttactgtatataattaaa
tttcatatgaaaatcaagagtccaacttaaagatatttctctcaattgtg
catgtttctcaactgtgcaaaaacttgcagtctttgtataatctttcttt
ttctaatatttttgcagtttttttctataatggtgccattaatatataga
tttctaaaagagtttatattaatggctttaactcataataatattttaat
ctaaataaatgcattgtttcattaggaaaaatataatttacttattacca
aataaggcagtataatgtaggccatttaggagaacaaaataaaatctcta
taaattctaataagaaaaatcaaaaaccagtggacatgaaagcaaatgat
acagggcaactggagagtaactttccatgaagcatgaagagcaagggaca
atgagagatgaggactccgtgggagcaggagaaagactagaaaacgatta
ggaaatgattgctctctaacgctctaaataagtcttggaaatgctacagt
gaaatccactatctcatatacttatccatgttggatggaaactttttgaa
agagatggtatcccatactacctcaggaagtgtaaatacaggagtggccc
caactacaatcatataacacactataa

gaattcaatggaacaaaaaagtatgcctgtgggttaaaatttttaagggg
gtgattttaaacttagaacacagattgaatgaaaccattacatttgtttt
aagtgttcatatgagcaaatatcaaagaaaaaagctaaacaattaaaagc
aaaatgaaaagcacaaagaatactcctcttgcttatagcccacagctgct
cttacacatcttcaaaaataaacagcctcaattataaacttggcacaaac
aataatgtttgtgagttataattaaagtaagttactggagttgattttct
cagctttatgaccaacaacctacagatgaacacattgtcccaccttaaga
tgtagttcataatatccttaactaacggtgaattcacaatacagccttaa
tgtggtaattttaaatctggaaaagctctttagaaaatagaatcaataaa
ggcactgaacacctattaaaggtatatcataaataaggactaatttggat
tcctttctatgctaacatagtaaatgatgcatatattatcactatataag
gatgattcataaataaatctttattataaaaatataatcaatcaattatt
tattaacaggaattgtttcattttgtattaatttcacaaagcttattaac
aaaagtaattattgacattaatttccactctgggatgaattagaatggaa
tctatagttataactaaaattattattagtagacatagttgtgaaatagc
agaactcaaactaatatttccaaaattaagttttctgttacacattatct
taccataggtatatttgcaaatattctcactgataaaaatacactttaat
ggtagtattgttatggagacaaacaattgttctgtggttggattttagac
tcactcaacaagaggaaatatactgctactttaaatttgattaaaaatat
ctagacagatcaaagagacgactaatgcagacctataaatagtgaccata
tttctgtcacctaaaatacctgtgtttttttgtgcacaatacaatcacta
ctctagcttcattagaagcatcaacttcttcttgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150450547_150451673
seq2: B6Ng01-314F20.b_44_1170 (reverse)

seq1  TTATA--GTGTTATATGATTTGTAGTTTGGGCCACT-CTGTA-TTACACT  46
      |||||  ||||||||||| |||||||| |||||||| ||||| |||||| 
seq2  TTATAGTGTGTTATATGA-TTGTAGTTGGGGCCACTCCTGTATTTACAC-  48

seq1  TTCCTGGGGTAGTATGGATTCCCATCTCTTTCAAAAAGTTTTCAT-CAAC  95
      |||||| ||||||||||  | |||||||||||||||||||| ||| ||||
seq2  TTCCTGAGGTAGTATGGGATACCATCTCTTTCAAAAAGTTTCCATCCAAC  98

seq1  ATGGATAAGTTATATGAGATAGTGGATTTCACTGTAGCATTTTCCAAGAC  145
      ||||||||| ||||||||||||||||||||||||||||| ||||||||||
seq2  ATGGATAAG-TATATGAGATAGTGGATTTCACTGTAGCA-TTTCCAAGAC  146

seq1  TTATTTAGAGCGTTTAGAGAGCAATCATTTCCTAATCGTTTTCTAGTCTT  195
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTATTTAGAGCG-TTAGAGAGCAATCATTTCCTAATCGTTTTCTAGTCTT  195

seq1  TCTCCTGCTCCCACGGAGTCCTCATCTCTCATTGTCCCTTGCTCTTCATG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGCTCCCACGGAGTCCTCATCTCTCATTGTCCCTTGCTCTTCATG  245

seq1  CTTCATGGAAAGTTACTCTCCAGTTGCCCTGTATCATTTGCTTTCATGTC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGGAAAGTTACTCTCCAGTTGCCCTGTATCATTTGCTTTCATGTC  295

seq1  CACTGGTTTTTGATTTTTCTTATTAGAATTTATAGAGATTTTATTTTGTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGTTTTTGATTTTTCTTATTAGAATTTATAGAGATTTTATTTTGTT  345

seq1  CTCCTAAATGGCCTACATTATACTGCCTTATTTGGTAATAAGTAAATTAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAAATGGCCTACATTATACTGCCTTATTTGGTAATAAGTAAATTAT  395

seq1  ATTTTTCCTAATGAAACAATGCATTTATTTAGATTAAAATATTATTATGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCCTAATGAAACAATGCATTTATTTAGATTAAAATATTATTATGA  445

seq1  GTTAAAGCCATTAATATAAACTCTTTTAGAAATCTATATATTAATGGCAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGCCATTAATATAAACTCTTTTAGAAATCTATATATTAATGGCAC  495

seq1  CATTATAGAAAAAAACTGCAAAAATATTAGAAAAAGAAAGATTATACAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAGAAAAAAACTGCAAAAATATTAGAAAAAGAAAGATTATACAAA  545

seq1  GACTGCAAGTTTTTGCACAGTTGAGAAACATGCACAATTGAGAGAAATAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCAAGTTTTTGCACAGTTGAGAAACATGCACAATTGAGAGAAATAT  595

seq1  CTTTAAGTTGGACTCTTGATTTTCATATGAAATTTAATTATATACAGTAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGTTGGACTCTTGATTTTCATATGAAATTTAATTATATACAGTAA  645

seq1  AAATGAGGATTATTAAAACCAAATTAATTATAAATGTGTTTTTAATATGG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGGATTATTAAAACCAAATTAATTATAAATGTGTTTTTAATATGG  695

seq1  TGATTAATGATGTGGGTTTAAGGCATTATAGTTTGTAAATATTGAGTCAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAATGATGTGGGTTTAAGGCATTATAGTTTGTAAATATTGAGTCAC  745

seq1  TCTACACTTTAATCTCTTGTTTCAACTTTTATTTAGAAAAAAGATTGAAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACTTTAATCTCTTGTTTCAACTTTTATTTAGAAAAAAGATTGAAA  795

seq1  TTTATATTATAAACAAACATGGTTAATACAAGTGTGAAATCAGACTCACT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATTATAAACAAACATGGTTAATACAAGTGTGAAATCAGACTCACT  845

seq1  CTCCCCAGAGTACCACACACATAATTTAAAATAGAATGTTTGCAGTAACA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAGAGTACCACACACATAATTTAAAATAGAATGTTTGCAGTAACA  895

seq1  GAAAATAGCTTGTCAAGCATCATCTGCTCACTGTGCATTTGGTAAGATTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAGCTTGTCAAGCATCATCTGCTCACTGTGCATTTGGTAAGATTG  945

seq1  AAAGAAACTCAAGTGATCCACAAAGAAGCAAAGGTTTAATCACAGAAGCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACTCAAGTGATCCACAAAGAAGCAAAGGTTTAATCACAGAAGCA  995

seq1  ACAGCACTTTTTAATTTTTACTTTGATATTCTAGGCACATTTGTATGGAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACTTTTTAATTTTTACTTTGATATTCTAGGCACATTTGTATGGAG  1045

seq1  AAACATGAGTTATAATTATGACTTCTTGCATTTTTGCATAATAAATTTTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGAGTTATAATTATGACTTCTTGCATTTTTGCATAATAAATTTTC  1095

seq1  TTTTCTATCGCATTTAGCAAAACACTGAATTC  1127
      ||||||||||||||||||||||||||||||||
seq2  TTTTCTATCGCATTTAGCAAAACACTGAATTC  1127


seq1: chr1_150322904_150323994
seq2: B6Ng01-314F20.g_64_1149

seq1  GAATTCAATGGAACAAAAAAGTATGCCTGTGGGTTAAAATTTTTAAGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGGAACAAAAAAGTATGCCTGTGGGTTAAAATTTTTAAGGGG  50

seq1  GTGATTTTAAACTTAGAACACAGATTGAATGAAACCATTACATTTGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTTAAACTTAGAACACAGATTGAATGAAACCATTACATTTGTTTT  100

seq1  AAGTGTTCATATGAGCAAATATCAAAGAAAAAAGCTAAACAATTAAAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTCATATGAGCAAATATCAAAGAAAAAAGCTAAACAATTAAAAGC  150

seq1  AAAATGAAAAGCACAAAGAATACTCCTCTTGCTTATAGCCCACAGCTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAAAAGCACAAAGAATACTCCTCTTGCTTATAGCCCACAGCTGCT  200

seq1  CTTACACATCTTCAAAAATAAACAGCCTCAATTATAAACTTGGCACAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACACATCTTCAAAAATAAACAGCCTCAATTATAAACTTGGCACAAAC  250

seq1  AATAATGTTTGTGAGTTATAATTAAAGTAAGTTACTGGAGTTGATTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTTTGTGAGTTATAATTAAAGTAAGTTACTGGAGTTGATTTTCT  300

seq1  CAGCTTTATGACCAACAACCTACAGATGAACACATTGTCCCACCTTAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTATGACCAACAACCTACAGATGAACACATTGTCCCACCTTAAGA  350

seq1  TGTAGTTCATAATATCCTTAACTAACGGTGAATTCACAATACAGCCTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTCATAATATCCTTAACTAACGGTGAATTCACAATACAGCCTTAA  400

seq1  TGTGGTAATTTTAAATCTGGAAAAGCTCTTTAGAAAATAGAATCAATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTAATTTTAAATCTGGAAAAGCTCTTTAGAAAATAGAATCAATAAA  450

seq1  GGCACTGAACACCTATTAAAGGTATATCATAAATAAGGACTAATTTGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTGAACACCTATTAAAGGTATATCATAAATAAGGACTAATTTGGAT  500

seq1  TCCTTTCTATGCTAACATAGTAAATGATGCATATATTATCACTATATAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTATGCTAACATAGTAAATGATGCATATATTATCACTATATAAG  550

seq1  GATGATTCATAAATAAATCTTTATTATAAAAATATAATCAATCAATTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTCATAAATAAATCTTTATTATAAAAATATAATCAATCAATTATT  600

seq1  TATTAACAGGAATTGTTTCATTTTGTATTAATTTCACAAAGCTTATTAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACAGGAATTGTTTCATTTTGTATTAATTTCACAAAGCTTATTAAC  650

seq1  AAAAGTAATTATTGACATTAATTTCCACTCTGGGATGAATTAGAATGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAATTATTGACATTAATTTCCACTCTGGGATGAATTAGAATGGAA  700

seq1  TCTATAGTTATAACTAAAATTATTATTAGTAGACATAGTTGTGAAATAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAGTTATAACTAAAATTATTATTAGTAGACATAGTTGTGAAATAGC  750

seq1  AGAACTCAAACTAATATTTCCAAAATTAAGTTTTCTGTTACACATTATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCAAACTAATATTTCCAAAATTAAGTTTTCTGTTACACATTATCT  800

seq1  TACCATAGGTATATTTGCAAATATTCTCACTGATAAAAATACACTTTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATAGGTATATTTGCAAATATTCTCACTGATAAAAATACACTTTAAT  850

seq1  GGTAGTATTGTTATGGAGACAAACAATTGTTCTGTGGTTGGATTTTAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTATTGTTATGGAGACAAACAATTGTTCTGTGGTTGGATTTTAGAC  900

seq1  TCACTCAACAAGAGGAAAATATAACTGCTACTTTAAATTTGATTAAAAAT  950
      ||||||||||||||| |||||| |||||||||||||||||||||||||||
seq2  TCACTCAACAAGAGG-AAATAT-ACTGCTACTTTAAATTTGATTAAAAAT  948

seq1  ATCTAGACAGATCAAAGGAGGAAGGAACTAATGCAGACCTATAAATAAGT  1000
      |||||||||||||||||   || |  |||||||||||||||||||| |||
seq2  ATCTAGACAGATCAAAG--AGACG--ACTAATGCAGACCTATAAAT-AGT  993

seq1  GACACATA-TTCTGTCACCTAAAATACCTGTG--TTTTTGTGCAC-ATAC  1046
      ||| |||| |||||||||||||||||||||||  ||||||||||| ||||
seq2  GAC-CATATTTCTGTCACCTAAAATACCTGTGTTTTTTTGTGCACAATAC  1042

seq1  AATCACTACTCCTAGCCTTCATTAG-AGCATCAACTCCTTCTTGTA  1091
      |||||||||| |||| ||||||||| |||||||||| |||||||||
seq2  AATCACTACT-CTAG-CTTCATTAGAAGCATCAACTTCTTCTTGTA  1086


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