BAC Information

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BAC

Clone NameB6Ng01-314J04
Chromosome1 (Build37)
Map Location 84,232,687 - 84,233,780
singlet/doubletsinglet
Overlap gene5033414K04Rik
Upstream gene4930544G21Rik, EG622958
Downstream geneLOC100039638, Dner, Trip12, Fbxo36, Slc16a14, LOC100039695, EG665317, LOC100039723, A530032D15Rik, LOC100039742, LOC100040158, LOC621835, EG665378
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314J04.bB6Ng01-314J04.g
ACCGA105464GA105465
length1,0981,157
definitionB6Ng01-314J04.b B6Ng01-314J04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatagcatctgtagacttcagctgagaatcatcttatttattag
gtattcatcattattttgcgattgtttcccatcttaagccattgcctttc
aagggaggtgcctcttagggtactttttgtcaaccccataacacacttca
ctgtaactatcaatacttctgactgactaacagaaagtgttcttttagaa
aagcaagatacttgtggctgtttccttgtgataaagttttgtccccagat
tcagcacactagttacttttaggtactaggacttgaagaccctcttcttc
tttcttttttaaataaaaaacattattgattttaaattatttttaaattt
tggaatctcacattatgtaccccaatcactctcaccttccagtctttcca
tatcttcatccctgtaaaccccccccccccagaaaaaagggaaaatccat
tttgtattgtctatatactcgctggagcgtggtcaaattcctagtgagca
tccagggaggatgagtctttctccactttcatccacagtcatcagctaag
gagagcagtgtggtagtctttggttgtgtggggccagctctccagagccc
atgctgccccatatgtcaggggaggggagaagaacctctatttctatcgg
tagttacttaggtagttacaaggtagttactaagaccttgtcacatgcct
gtcagccttgactctctgaaagttccatgttagaacattttattcaatct
tcatcctgtggtctccctatacatgtgaaatctcccattttgctctgaac
aactaataactaatctaatcagaataactcaaattatgaagtaagattat
tattaaacagatttagctaacagataatcctatttaaatacatatacaaa
tttaaccattctgttttattttttttaagtttttgtaacaaaatcacaaa
aaaagctggtggtttatgaagaaacccactgcccttcgccttgctcccct
ctctggatagttagggctttatgagctggatcggtttcaattccgcttaa
gaagaatgaacactcggctatttctgtggtcataagataggaacctga
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgcccggggcccagcaaa
cacagaagtggaatgctcacagtcagcctaatggaatggatcatagggct
ccctaatgggagagctagagaagtagcccaaggagcttaagggatctgca
accctataggtggaacacattatgagctaaccagtaccccgagcctctga
ctctagctgcatatatatccaaagattgccttagtcggcccattcacact
ggaagagagtccaattgaacttgccaaatcttatatgctccccaggttaa
cagtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_84232687_84233780
seq2: B6Ng01-314J04.b_48_1145 (reverse)

seq1  TCAGGTTCTCATCTTATGACCACAGAAATAGCCCGGTGTTTCATTTCTTC  50
      ||||||||  |||||||||||||||||||||||  ||| |||| ||||| 
seq2  TCAGGTTCCTATCTTATGACCACAGAAATAGCCGAGTG-TTCA-TTCTT-  47

seq1  CTAAAGCCGAATTG-AACCGATTCAGCTCATAAAAGCCCTTACTAT-CAG  98
      || |||| |||||| ||||||| |||||||| |||||||| ||||| |||
seq2  CTTAAGCGGAATTGAAACCGATCCAGCTCAT-AAAGCCCTAACTATCCAG  96

seq1  AGA-GGGAGCAAGGCGAA-GGCAGTGGGTTTCTTCATAAACCACCAGCCT  146
      ||| |||||||||||||| ||||||||||||||||||||||||||||| |
seq2  AGAGGGGAGCAAGGCGAAGGGCAGTGGGTTTCTTCATAAACCACCAGCTT  146

seq1  TTTTTGTGATTTTGTTAC-AAAACTT-AAAAAAATAAAACAGAATGGTT-  193
      |||||||||||||||||| ||||||| |||||||||||||||||||||| 
seq2  TTTTTGTGATTTTGTTACAAAAACTTAAAAAAAATAAAACAGAATGGTTA  196

seq1  AATTTGTATATGTATTTAAATAGGATTATCTGTTAGCT-AATCTGTTTAA  242
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AATTTGTATATGTATTTAAATAGGATTATCTGTTAGCTAAATCTGTTTAA  246

seq1  TAATAATCTTACTTCATAATTTGAGTTATTCTGATTAGATTAGTTATTAG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATCTTACTTCATAATTTGAGTTATTCTGATTAGATTAGTTATTAG  296

seq1  TTGTTCAGAGCAAAATGGGAGATTTCACATGTATAGGGAGACCACAGGAT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCAGAGCAAAATGGGAGATTTCACATGTATAGGGAGACCACAGGAT  346

seq1  GAAGATTGAATAAAATGTTCTAACATGGAACTTTCAGAGAGTCAAGGCTG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTGAATAAAATGTTCTAACATGGAACTTTCAGAGAGTCAAGGCTG  396

seq1  ACAGGCATGTGACAAGGTCTTAGTAACTACCTTGTAACTACCTAAGTAAC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCATGTGACAAGGTCTTAGTAACTACCTTGTAACTACCTAAGTAAC  446

seq1  TACCGATAGAAATAGAGGTTCTTCTCCCCTCCCCTGACATATGGGGCAGC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGATAGAAATAGAGGTTCTTCTCCCCTCCCCTGACATATGGGGCAGC  496

seq1  ATGGGCTCTGGAGAGCTGGCCCCACACAACCAAAGACTACCACACTGCTC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTCTGGAGAGCTGGCCCCACACAACCAAAGACTACCACACTGCTC  546

seq1  TCCTTAGCTGATGACTGTGGATGAAAGTGGAGAAAGACTCATCCTCCCTG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGCTGATGACTGTGGATGAAAGTGGAGAAAGACTCATCCTCCCTG  596

seq1  GATGCTCACTAGGAATTTGACCACGCTCCAGCGAGTATATAGACAATACA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTCACTAGGAATTTGACCACGCTCCAGCGAGTATATAGACAATACA  646

seq1  AAATGGATTTTCCCTTTTTTCTGGGGGGGGGGGGTTTACAGGGATGAAGA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGATTTTCCCTTTTTTCTGGGGGGGGGGGGTTTACAGGGATGAAGA  696

seq1  TATGGAAAGACTGGAAGGTGAGAGTGATTGGGGTACATAATGTGAGATTC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAAGACTGGAAGGTGAGAGTGATTGGGGTACATAATGTGAGATTC  746

seq1  CAAAATTTAAAAATAATTTAAAATCAATAATGTTTTTTATTTAAAAAAGA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTTAAAAATAATTTAAAATCAATAATGTTTTTTATTTAAAAAAGA  796

seq1  AAGAAGAAGAGGGTCTTCAAGTCCTAGTACCTAAAAGTAACTAGTGTGCT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAGAGGGTCTTCAAGTCCTAGTACCTAAAAGTAACTAGTGTGCT  846

seq1  GAATCTGGGGACAAAACTTTATCACAAGGAAACAGCCACAAGTATCTTGC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGGGGACAAAACTTTATCACAAGGAAACAGCCACAAGTATCTTGC  896

seq1  TTTTCTAAAAGAACACTTTCTGTTAGTCAGTCAGAAGTATTGATAGTTAC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAAAAGAACACTTTCTGTTAGTCAGTCAGAAGTATTGATAGTTAC  946

seq1  AGTGAAGTGTGTTATGGGGTTGACAAAAAGTACCCTAAGAGGCACCTCCC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGTGTGTTATGGGGTTGACAAAAAGTACCCTAAGAGGCACCTCCC  996

seq1  TTGAAAGGCAATGGCTTAAGATGGGAAACAATCGCAAAATAATGATGAAT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGGCAATGGCTTAAGATGGGAAACAATCGCAAAATAATGATGAAT  1046

seq1  ACCTAATAAATAAGATGATTCTCAGCTGAAGTCTACAGATGCTATGGAAT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATAAATAAGATGATTCTCAGCTGAAGTCTACAGATGCTATGGAAT  1096

seq1  TC  1094
      ||
seq2  TC  1098