BAC Information

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BAC

Clone NameB6Ng01-314O18
Chromosome1 (Build37)
Map Location 150,769,894 - 150,920,607
singlet/doubletdoublet
Overlap geneLOC100042792, LOC435647
Upstream genenone
Downstream geneLOC100042813, Pla2g4a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314O18.bB6Ng01-314O18.g
ACCGA105707GA105708
length1,1361,046
definitionB6Ng01-314O18.b B6Ng01-314O18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,919,477 - 150,920,607)(150,769,894 - 150,770,946)
sequence
gaattcaacgtgcagcttaagctggcctcaaacaagatttttcagtttta
gcatctacctctaggcttacacatgaattaccatgctattttcctttaat
aaggtaaagcaacgaaaaaagttcccaaggataaagaataagtgaaccat
tatatgtggtggtgtttctggacttattttatcctctaggacacatatct
tctctttgaaggttcttagtggtagggagaatataaatttttgatactga
cacccgtccattcaaagcaacatggctgcaaaataatctttctcagctag
taaccatttaccccctcaaaactccatccttttatcttgagttctcagtg
atacctacctagaaagctgagagcaccctgggatgaaagctagttgaatg
aagaacactcaggtcacacttcccaactccaccagaatcatttgttcttc
agagagattctctccaagttctccatgagggtctttatatgtcacagctt
ctaagttccatctccttattaacttctggaggtattctcattctcatagt
cctgatttacactggacaactgttaccactctttttaaagacagatttca
tccagacaatatttttttctgttaccctcctttcataccttttagtagct
actcaatatttatggctgattgtaagtgtgaagaaaattaaatgccagga
gtcactagcaagaagggattttacatattaggaagttctgtaaaattttt
aaaactaaacaaacaaacaaacaaacaaacaaacaaagttttcttttcct
gagaggaaaatatatttgtactgtctaagaaagtagttcacagaagagag
catccttttgataagatgcttattgtaggctgtaaaaaaggacactatgt
ttgctgttaacttcagatcaggaagtttgtctaggagaaatgtgggtccc
tgtatttgatagcttagtgatatgtatcaagaagactagagagtctttct
tttctcctagtgtacatgttttcagtttaagtctgagagccttcagttcc
tcctttcagatttagaaagcctcaatcatttcttataaaaaacatagtgt
tctggacaccaattttatgggcaatcctgtgctttt

gaattcaggcttctcttgcctcaaccttgatgctggaattacaggtaaaa
gccaccattctaggctacttcttggttttcttaaaaggtaaggatcaggt
atgagaggagacagggatgatttacagggtcaggaatttgaacagatatg
tgtagaaatggggggtggggaactggggtagccaacagaaagtcacagat
gccaggaaagcaggaggctcccaggaccaaactgggatgagattagctga
aatggccaacaaaagagtgggaggacctgtagagaccatatctagcagtg
aagcaaggtccccaggtggagcatggagccaccatgctcctgtctaaagg
aaatacagagacaaaatgtgaagcattcactgaaggaaaggccatccaga
gactgccccacctgggaatccatcccatacacagacaccaaacccagaca
ctactgtggatgccaaggagtacttgctgacaagagcctgatatagctgt
ctcctgagaagctctgccagagcctgacatatatagaagtggatattcat
agccaaccattggactgatcactgggtcctcattagaggagttagagaaa
agactgaaggagttgaaggccttttcatccccataggaagacaacaatat
caactaaccagaacccccagaccttccagggactaaaccaccaaacaaag
agtacacattgaggggcccgtgacccaaggtgtaaatgtagcagaggatg
gacttgttgggcatcagtgggaggagaggcccttggtcctgtggagactt
gatgccccaacgtagggaaacaccaggggtgggggtcaggagtgagtggt
tgcgtataggagtaccctcgtagaagcaggttaagggggcatggtatagg
gggtttctggagggaaaaccaggaaagaggatacatttgaattgtaataa
ataaatatcataaaaagaaaaaaagttaaaagtagattttagatactggt
gtacatgtgcagatctcagtagctacgctgaaatattggagttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150919477_150920607
seq2: B6Ng01-314O18.b_47_1182 (reverse)

seq1  AAAAGCACAGGGATTG-CCATAAAA-TGGTGT-CAGAACACTATG--TTT  45
      ||||||||| |||||| |||||||| |||||| ||||||||||||  |||
seq2  AAAAGCACA-GGATTGCCCATAAAATTGGTGTCCAGAACACTATGTTTTT  49

seq1  TATAAGAAATGATTTGAGCTTTCTAAATCTGAAAGGA-GAACTGAAGGCT  94
      ||||||||||||||   |||||||||||||||||||| ||||||||||||
seq2  TATAAGAAATGATTGAGGCTTTCTAAATCTGAAAGGAGGAACTGAAGGCT  99

seq1  CTCAGACTTAAACTGAAAACATTGTACACTTAGGAGAAAAGAAAGACTCT  144
      ||||||||||||||||||||| ||||||| ||||||||||||||||||||
seq2  CTCAGACTTAAACTGAAAACA-TGTACAC-TAGGAGAAAAGAAAGACTCT  147

seq1  CTAGTCTTCTTGATACATATCACTAAGCTATCAAATACAGGGA-CCACAT  193
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTAGTCTTCTTGATACATATCACTAAGCTATCAAATACAGGGACCCACAT  197

seq1  TTCTCCTAGACAAACTTCCTGATCTGAAGTTAACAGC-AACATAGTGTCC  242
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTCTCCTAGACAAACTTCCTGATCTGAAGTTAACAGCAAACATAGTGTCC  247

seq1  TTTTTTACAGCCTACAATAAGCATCTTATCAAAAGGATGCTCTCTTCTGT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTACAGCCTACAATAAGCATCTTATCAAAAGGATGCTCTCTTCTGT  297

seq1  GAACTACTTTCTTAGACAGTACAAATATATTTTCCTCTCAGGAAAAGAAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTACTTTCTTAGACAGTACAAATATATTTTCCTCTCAGGAAAAGAAA  347

seq1  ACTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTAGTTTTAAAAATTTTAC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTAGTTTTAAAAATTTTAC  397

seq1  AGAACTTCCTAATATGTAAAATCCCTTCTTGCTAGTGACTCCTGGCATTT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTCCTAATATGTAAAATCCCTTCTTGCTAGTGACTCCTGGCATTT  447

seq1  AATTTTCTTCACACTTACAATCAGCCATAAATATTGAGTAGCTACTAAAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTTCACACTTACAATCAGCCATAAATATTGAGTAGCTACTAAAA  497

seq1  GGTATGAAAGGAGGGTAACAGAAAAAAATATTGTCTGGATGAAATCTGTC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGAAAGGAGGGTAACAGAAAAAAATATTGTCTGGATGAAATCTGTC  547

seq1  TTTAAAAAGAGTGGTAACAGTTGTCCAGTGTAAATCAGGACTATGAGAAT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAGAGTGGTAACAGTTGTCCAGTGTAAATCAGGACTATGAGAAT  597

seq1  GAGAATACCTCCAGAAGTTAATAAGGAGATGGAACTTAGAAGCTGTGACA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATACCTCCAGAAGTTAATAAGGAGATGGAACTTAGAAGCTGTGACA  647

seq1  TATAAAGACCCTCATGGAGAACTTGGAGAGAATCTCTCTGAAGAACAAAT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGACCCTCATGGAGAACTTGGAGAGAATCTCTCTGAAGAACAAAT  697

seq1  GATTCTGGTGGAGTTGGGAAGTGTGACCTGAGTGTTCTTCATTCAACTAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGGTGGAGTTGGGAAGTGTGACCTGAGTGTTCTTCATTCAACTAG  747

seq1  CTTTCATCCCAGGGTGCTCTCAGCTTTCTAGGTAGGTATCACTGAGAACT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATCCCAGGGTGCTCTCAGCTTTCTAGGTAGGTATCACTGAGAACT  797

seq1  CAAGATAAAAGGATGGAGTTTTGAGGGGGTAAATGGTTACTAGCTGAGAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATAAAAGGATGGAGTTTTGAGGGGGTAAATGGTTACTAGCTGAGAA  847

seq1  AGATTATTTTGCAGCCATGTTGCTTTGAATGGACGGGTGTCAGTATCAAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATTTTGCAGCCATGTTGCTTTGAATGGACGGGTGTCAGTATCAAA  897

seq1  AATTTATATTCTCCCTACCACTAAGAACCTTCAAAGAGAAGATATGTGTC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATATTCTCCCTACCACTAAGAACCTTCAAAGAGAAGATATGTGTC  947

seq1  CTAGAGGATAAAATAAGTCCAGAAACACCACCACATATAATGGTTCACTT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGGATAAAATAAGTCCAGAAACACCACCACATATAATGGTTCACTT  997

seq1  ATTCTTTATCCTTGGGAACTTTTTTCGTTGCTTTACCTTATTAAAGGAAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTATCCTTGGGAACTTTTTTCGTTGCTTTACCTTATTAAAGGAAA  1047

seq1  ATAGCATGGTAATTCATGTGTAAGCCTAGAGGTAGATGCTAAAACTGAAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATGGTAATTCATGTGTAAGCCTAGAGGTAGATGCTAAAACTGAAA  1097

seq1  AATCTTGTTTGAGGCCAGCTTAAGCTGCACGTTGAATTC  1131
      |||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGTTTGAGGCCAGCTTAAGCTGCACGTTGAATTC  1136


seq1: chr1_150769894_150770946
seq2: B6Ng01-314O18.g_68_1113

seq1  GAATTCAGGCTTCTCTTGCCTCAACCTTGATGCTGGAATTACAGGTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCTTCTCTTGCCTCAACCTTGATGCTGGAATTACAGGTAAAA  50

seq1  GCCACCATTCTAGGCTACTTCTTGGTTTTCTTAAAAGGTAAGGATCAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCATTCTAGGCTACTTCTTGGTTTTCTTAAAAGGTAAGGATCAGGT  100

seq1  ATGAGAGGAGACAGGGATGATTTACAGGGTCAGGAATTTGAACAGATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGGAGACAGGGATGATTTACAGGGTCAGGAATTTGAACAGATATG  150

seq1  TGTAGAAATGGGGGGTGGGGAACTGGGGTAGCCAACAGAAAGTCACAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAAATGGGGGGTGGGGAACTGGGGTAGCCAACAGAAAGTCACAGAT  200

seq1  GCCAGGAAAGCAGGAGGCTCCCAGGACCAAACTGGGATGAGATTAGCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAAAGCAGGAGGCTCCCAGGACCAAACTGGGATGAGATTAGCTGA  250

seq1  AATGGCCAACAAAAGAGTGGGAGGACCTGTAGAGACCATATCTAGCAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCCAACAAAAGAGTGGGAGGACCTGTAGAGACCATATCTAGCAGTG  300

seq1  AAGCAAGGTCCCCAGGTGGAGCATGGAGCCACCATGCTCCTGTCTAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGGTCCCCAGGTGGAGCATGGAGCCACCATGCTCCTGTCTAAAGG  350

seq1  AAATACAGAGACAAAATGTGAAGCATTCACTGAAGGAAAGGCCATCCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAGAGACAAAATGTGAAGCATTCACTGAAGGAAAGGCCATCCAGA  400

seq1  GACTGCCCCACCTGGGAATCCATCCCATACACAGACACCAAACCCAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCCCCACCTGGGAATCCATCCCATACACAGACACCAAACCCAGACA  450

seq1  CTACTGTGGATGCCAAGGAGTACTTGCTGACAAGAGCCTGATATAGCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTGGATGCCAAGGAGTACTTGCTGACAAGAGCCTGATATAGCTGT  500

seq1  CTCCTGAGAAGCTCTGCCAGAGCCTGACATATATAGAAGTGGATATTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGAGAAGCTCTGCCAGAGCCTGACATATATAGAAGTGGATATTCAT  550

seq1  AGCCAACCATTGGACTGATCACTGGGTCCTCATTAGAGGAGTTAGAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAACCATTGGACTGATCACTGGGTCCTCATTAGAGGAGTTAGAGAAA  600

seq1  AGACTGAAGGAGTTGAAGGCCTTTTCATCCCCATAGGAAGACAACAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGAAGGAGTTGAAGGCCTTTTCATCCCCATAGGAAGACAACAATAT  650

seq1  CAACTAACCAGAACCCCCAGACCTTCCAGGGACTAAACCACCAAACAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAACCAGAACCCCCAGACCTTCCAGGGACTAAACCACCAAACAAAG  700

seq1  AGTACACATTGAGGGGCCCGTGACCCAAGGTGTAAATGTAGCAGAGGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACATTGAGGGGCCCGTGACCCAAGGTGTAAATGTAGCAGAGGATG  750

seq1  GACTTGTTGGGCATCAGTGGGAGGAGAGGCCCTTGGTCCTGTGGAGACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGTTGGGCATCAGTGGGAGGAGAGGCCCTTGGTCCTGTGGAGACTT  800

seq1  GATGCCCCAACGTAGGGAAACACCAGGGGTGGGGGTCAGGAGTGAGTGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCCCAACGTAGGGAAACACCAGGGGTGGGGGTCAGGAGTGAGTGGT  850

seq1  TGCGTATAGGAGTACCCTCGTAGAAGCAGGTTAAGGGGGCATGGTATAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTATAGGAGTACCCTCGTAGAAGCAGGTTAAGGGGGCATGGTATAGG  900

seq1  GGGTTTCTGGAGGGAAAACCAGGAAAGAGGATAACATTTGAATTGTAAAT  950
      |||||||||||||||||||||||||||||||| ||||||||||||| |||
seq2  GGGTTTCTGGAGGGAAAACCAGGAAAGAGGAT-ACATTTGAATTGT-AAT  948

seq1  AAATAAAATATCCAATAAAAAAGAAAAAAGTTAAAAGGTAAGATTTTAGA  1000
      |||| |||||||  |||||||  ||||||||||||||   ||||||||||
seq2  AAAT-AAATATC--ATAAAAAGAAAAAAAGTTAAAAG--TAGATTTTAGA  993

seq1  TACTGTGGTACATGTGCAGAATCTCAGTTGCTACGCTGAAATATT-GAGT  1049
      |||||  |||||||||||| |||||||| |||||||||||||||| ||||
seq2  TACTGGTGTACATGTGCAG-ATCTCAGTAGCTACGCTGAAATATTGGAGT  1042

seq1  TTTG  1053
      ||||
seq2  TTTG  1046


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