BAC Information

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BAC

Clone NameB6Ng01-315J01
Chromosome1 (Build37)
Map Location 37,849,769 - 37,990,186
singlet/doubletdoublet
Overlap geneTsga10, EG623661, Mitd1, Mrpl30, Gm776
Upstream geneTmem131, EG241053, A230074B11Rik, 4921511C04Rik, Cnga3, Inpp4a, 6330578E17Rik, Unc50, Mgat4a, 2010300C02Rik
Downstream gene2300002O18Rik, Txndc9, EG666434, Eif5b, Rev1, EG329123, Aff3, Lonrf2, Chst10, EG625775
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315J01.bB6Ng01-315J01.g
ACCGA106184GA106185
length4461,144
definitionB6Ng01-315J01.b B6Ng01-315J01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,989,743 - 37,990,186)(37,849,769 - 37,850,910)
sequence
gaaattcagtagttgaatcttttagaaagagtatgggacctttgagtttc
atgtttcatgtgttgtgatttgcatgtatcttaggttgtacatcacttct
ggttgtatttggagactcttcttattgagcagactactcttgagagctca
gcctccactagcaccccgagtagacaaaattgcggtaacaacagcaacac
ctaatcaaacaagatgtaaaaatacacctagcccattaatatatcactaa
ttaccataaaacacagatggcaaaataatgcagcgtgtgctatgaagacc
aaatttacctaagagccaaattcaggtctgtcatcccagcattcaggaga
gtgaggcaagagagccaagagttcaaagccagccttagctatatagcaag
ttcaaatctaacctgggctatgcaatactctgtcttaaaaattaaa
gaattctgtctgtgaatacaggaggtcaaaatccacttcaacgtggggtc
agagcaacataacaagacctcacttccagaaatccacatttctgagcaaa
atatgctggaaagtacattaaggaagaaatctgaaacaaaaaaataacac
atagaaaaatatgcacatttgaaaaataattgaatagtacttctagaaag
aaacatagtatctgtagtgaaaaccataacaaagacaccaagaacagagg
aaaagggactggtgatgtggaagatggggcacagaacatgaaaaagcaca
cattatgacagaaccaatagagaagggaaatgaggcaagataacacaaga
gttgagggtataggagggtaacttgaaagctgtaatattcaagaatatct
aaaacatttccagaactaataaaaggtacaagtaactctgaatgaaacag
ggagatagacccacaataccaaagccagaggaaacaattcccacatatgg
cagtagaacttaagcaatgagaaagacaagaccataataggaatggtgac
agaggcagacactcgaggagagacactggaatgaaaacagacctaccaac
aaggacaagggccactgtctcaaatatttgtttctatttttatttgtgtg
tacatgtgtgtatgtgtaaactttgggcatgcagatacccctggaagcca
gaagaaattatcaaatcccttggagatgatattacaggcagttgtgagct
gtcagacgtgggtaggcgaactgagctcaggtcctctgcaaaggcagtat
gcattcttcaccactgagtcatttttccaactcctatcaggttattttta
aagttataaagggaaatattctcagtccagaattctatgtttcagctaaa
ctaatttctcaagggctaagggtatattagtcattttcaaaggaggatgg
gaaaatatggaacatactgggtttctgcagggaggaaggttaggaaagga
actggagtaggagaacatctacaggaagtaaggagacaagggcttttata
tgctctaggtatataacacagcactgaatcacaagaacaccattattaat
gtactggaagctgtaactggtgacttaactagtgcatggtaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_37989743_37990186
seq2: B6Ng01-315J01.b_52_495 (reverse)

seq1  TTTAATTTTTAAGACAGAGTATTGCATAGCCCAGGTTAGATTTGAACTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTTTAAGACAGAGTATTGCATAGCCCAGGTTAGATTTGAACTTG  50

seq1  CTATATAGCTAAGGCTGGCTTTGAACTCTTGGCTCTCTTGCCTCACTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATAGCTAAGGCTGGCTTTGAACTCTTGGCTCTCTTGCCTCACTCTC  100

seq1  CTGAATGCTGGGATGACAGACCTGAATTTGGCTCTTAGGTAAATTTGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGCTGGGATGACAGACCTGAATTTGGCTCTTAGGTAAATTTGGTC  150

seq1  TTCATAGCACACGCTGCATTATTTTGCCATCTGTGTTTTATGGTAATTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGCACACGCTGCATTATTTTGCCATCTGTGTTTTATGGTAATTAG  200

seq1  TGATATATTAATGGGCTAGGTGTATTTTTACATCTTGTTTGATTAGGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATATTAATGGGCTAGGTGTATTTTTACATCTTGTTTGATTAGGTGT  250

seq1  TGCTGTTGTTACCGCAATTTTGTCTACTCGGGGTGCTAGTGGAGGCTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTGTTACCGCAATTTTGTCTACTCGGGGTGCTAGTGGAGGCTGAG  300

seq1  CTCTCAAGAGTAGTCTGCTCAATAAGAAGAGTCTCCAAATACAACCAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAAGAGTAGTCTGCTCAATAAGAAGAGTCTCCAAATACAACCAGAA  350

seq1  GTGATGTACAACCTAAGATACATGCAAATCACAACACATGAAACATGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTACAACCTAAGATACATGCAAATCACAACACATGAAACATGAAA  400

seq1  CTCAAAGGTCCCATACTCTTTCTAAAAGATTCAACTACTGAATT  444
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGGTCCCATACTCTTTCTAAAAGATTCAACTACTGAATT  444

seq1: chr1_37849769_37850910
seq2: B6Ng01-315J01.g_68_1211

seq1  GAATTCTGTCTGTGAATACAGGAGGTCAAAATCCACTTCAACGTGGGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCTGTGAATACAGGAGGTCAAAATCCACTTCAACGTGGGGTC  50

seq1  AGAGCAACATAACAAGACCTCACTTCCAGAAATCCACATTTCTGAGCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAACATAACAAGACCTCACTTCCAGAAATCCACATTTCTGAGCAAA  100

seq1  ATATGCTGGAAAGTACATTAAGGAAGAAATCTGAAACAAAAAAATAACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTGGAAAGTACATTAAGGAAGAAATCTGAAACAAAAAAATAACAC  150

seq1  ATAGAAAAATATGCACATTTGAAAAATAATTGAATAGTACTTCTAGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAAATATGCACATTTGAAAAATAATTGAATAGTACTTCTAGAAAG  200

seq1  AAACATAGTATCTGTAGTGAAAACCATAACAAAGACACCAAGAACAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAGTATCTGTAGTGAAAACCATAACAAAGACACCAAGAACAGAGG  250

seq1  AAAAGGGACTGGTGATGTGGAAGATGGGGCACAGAACATGAAAAAGCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGACTGGTGATGTGGAAGATGGGGCACAGAACATGAAAAAGCACA  300

seq1  CATTATGACAGAACCAATAGAGAAGGGAAATGAGGCAAGATAACACAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATGACAGAACCAATAGAGAAGGGAAATGAGGCAAGATAACACAAGA  350

seq1  GTTGAGGGTATAGGAGGGTAACTTGAAAGCTGTAATATTCAAGAATATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGGGTATAGGAGGGTAACTTGAAAGCTGTAATATTCAAGAATATCT  400

seq1  AAAACATTTCCAGAACTAATAAAAGGTACAAGTAACTCTGAATGAAACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATTTCCAGAACTAATAAAAGGTACAAGTAACTCTGAATGAAACAG  450

seq1  GGAGATAGACCCACAATACCAAAGCCAGAGGAAACAATTCCCACATATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATAGACCCACAATACCAAAGCCAGAGGAAACAATTCCCACATATGG  500

seq1  CAGTAGAACTTAAGCAATGAGAAAGACAAGACCATAATAGGAATGGTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGAACTTAAGCAATGAGAAAGACAAGACCATAATAGGAATGGTGAC  550

seq1  AGAGGCAGACACTCGAGGAGAGACACTGGAATGAAAACAGACCTACCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGACACTCGAGGAGAGACACTGGAATGAAAACAGACCTACCAAC  600

seq1  AAGGACAAGGGCCACTGTCTCAAATATTTGTTTCTATTTTTATTTGTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAAGGGCCACTGTCTCAAATATTTGTTTCTATTTTTATTTGTGTG  650

seq1  TACATGTGTGTATGTGTAAACTTTGGGCATGCAGATACCCCTGGAAGCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTGTGTATGTGTAAACTTTGGGCATGCAGATACCCCTGGAAGCCA  700

seq1  GAAGAAATTATCAAATCCCTTGGAGATGATATTACAGGCAGTTGTGAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAATTATCAAATCCCTTGGAGATGATATTACAGGCAGTTGTGAGCT  750

seq1  GTCAGACGTGGGTAGGCGAACTGAGCTCAGGTCCTCTGCAAAGGCAGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGACGTGGGTAGGCGAACTGAGCTCAGGTCCTCTGCAAAGGCAGTAT  800

seq1  GCATTCTTCACCACTGAGTCATTTTTCCAACTCCTATCAGGTTATTTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTTCACCACTGAGTCATTTTTCCAACTCCTATCAGGTTATTTTTA  850

seq1  AAGTTATAAAGGGAAATATTCTCAGTCCAGAATTCTATG-TTCAGCTAAA  899
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAGTTATAAAGGGAAATATTCTCAGTCCAGAATTCTATGTTTCAGCTAAA  900

seq1  CTAA-TTCTCAA-GGCTAAGGGTATATTAGTCATTTTCAAAG--AGAT-G  944
      |||| ||||||| |||||||||||||||||||||||||||||   ||| |
seq2  CTAATTTCTCAAGGGCTAAGGGTATATTAGTCATTTTCAAAGGAGGATGG  950

seq1  GAAAATAT-GAACATACT-GGTTTCTGCAGGAAGGAAGGTTAGAAAAGGA  992
      |||||||| ||||||||| |||||||||||| ||||||||||| ||||||
seq2  GAAAATATGGAACATACTGGGTTTCTGCAGGGAGGAAGGTTAGGAAAGGA  1000

seq1  AACTGAGTAAGGAAGAAACAAC-ACAAGAAGTAAGAGAACAAAGGC-TTT  1040
      |   |||| ||||   |||| | ||| ||||||||   |||| ||| |||
seq2  ACTGGAGT-AGGA--GAACATCTACAGGAAGTAAGGAGACAAGGGCTTTT  1047

seq1  ATATGCCTCTAGGTATATAAACACAGCACTG-ATCACAAGAACAACAATA  1089
      ||||| |||||||||||| |||||||||||| |||||||||||| || ||
seq2  ATATG-CTCTAGGTATAT-AACACAGCACTGAATCACAAGAACACCATTA  1095

seq1  ATTATGTACT-GAAGCATGTAAAAACTGTGAAACTAAAATAGTGCATGGT  1138
       | ||||||| ||||| |||   ||||| |  ||| || |||||||||||
seq2  TTAATGTACTGGAAGC-TGT---AACTG-GTGACTTAACTAGTGCATGGT  1140

seq1  AAGG  1142
      ||||
seq2  AAGG  1144