BAC Information

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BAC

Clone NameB6Ng01-316H09
Chromosome1 (Build37)
Map Location 150,626,280 - 150,627,353
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792, LOC435647, LOC100042813
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316H09.bB6Ng01-316H09.g
ACCGA106853GA106854
length1,1841,064
definitionB6Ng01-316H09.b B6Ng01-316H09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagattttcaaaaaatatcaacatcaatatttctccatttt
tttcataaaatataaaaatgccctactttttaaaagaattcataggtacc
ctgatatataaaccacataaaatctcaacaaataaagagaatgacggtct
attttttcttatggatattgatagtaatattctcaaagcaatacttgcaa
atcaaatctaagaactcatcaaaagatagcccatcatgagaagtagagtt
tatggcaggcatacaagggtggctcaacacatataaattgataaatgtaa
tccaccatataagcagactgaaagacaaaaaacatgggtcatttcattgc
atgtggagatagcttttgacaaaatacaaaacctcttcataattaaagta
ctgcagaggctattgatacaaaggttatatttcaaactaataaaggcaat
ttacagcaagctcatagacaacatcaacctatgtggagacaagctcaaat
cattcccgttaacatcaaaataagtttattgactctctccatatgtattc
aatatactgaaaaaaaggtttggctagagcaataatacaactaaagcaga
tcaaggtgatacaagttggacgggaagttatcaaagtatccttattttca
tttgatagacttgtaaatataagtgaccctaaaaattccaccaagaacgt
cttatagctgataaacactttcagaaaagttataagatacaaaattaact
cagaaaaatgagtaaacttccaatatccaaatggcaactatccaaggact
tcaggaaaacagtacctttcacaatttcctcaaaaaatattcttcaccct
aaccaagcagtgaaagacttgtatgttaaaaccttaaagacatagaaaga
aagaaaagttttaaagatacaaaaatatgggaagatcccaaattctcatg
cagtattaaaataaatattctaaaactggctatctataatatattgtaca
gattcaatgtatccccatcaaaattctaacacaatttttcacagaacatg
aaagatatttgtctttatcatatatgaatcaaacaactggatttttaaac
tatgttctaaacaaattaagaaactgaatggaatgtgtcacgacctttct
tctttcaattaaccggtgaaaccattttcctctg

gaattctcaaaaaataaaatatacttgaacagtggacagaatattaaaat
acatctgcaaaagtgtgagggatttatatttgtaatttgtattagacgat
atttttcacaggtggaattaaaacacatttgcaaattcataggcaataac
atgcttaaaatgcatttgtttcattaagaacatctcaaaatttataaata
atttagaagatttttaaatcatttccatcatttcatttgcaacacattag
tacattggcatttaaaatgccttaaatattgtatccggtagtggctatat
atgcatgtatttactgctttcacctagtgagtgaaatccaaaatatcata
tttatgtaaaatttatttctctccattttatttttatcttatctgtttct
tcaacactaacattttaataactgtgcacagttattttttttggtttttt
tttttttttttttttttggtgaggttgtatttataataagtaattaagaa
tcacacagctgggttctttttcatctgtatctggaaacctttctggataa
ctgtgttcctgactacaaaattcggacaattataggcattacccaaagtt
gttctgaatattagtgtaaataattaacattaaaaaaattgtgaaaaaaa
tgtgaacttatgcataagtactgaaaagtaggaattagattaattgtatt
aaacaaacaagggaaaagttggctatattctatcagttattctataagac
ttttgtttttaaaatcatagtgaccaatcattttatagtctacaatgagc
atgaaaggaaggaacatagttacacattcgaaaggcaatactgtctgtca
gatttgtaaaacctgcagtccaagagttacaggcatccacatgttagcca
aagagaggatgaaagaagcccaatgtaaatttgtacataatttaaatact
gacaactttaggattgattttttaaaatgatcatcacatgttctcaacat
gtgacctttcaatgcaatgttgtatcacatgtccaaacgtctgtcatccc
tctaagtgtaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150626280_150627353
seq2: B6Ng01-316H09.g_70_1133

seq1  GAATTCTCAAAAAATAAAATATACTTGAACAGTGGACAGAATATTAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAAAAATAAAATATACTTGAACAGTGGACAGAATATTAAAAT  50

seq1  ACATCTGCAAAAGTGTGAGGGATTTATATTTGTAATTTGTATTAGACGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGCAAAAGTGTGAGGGATTTATATTTGTAATTTGTATTAGACGAT  100

seq1  ATTTTTCACAGGTGGAATTAAAACACATTTGCAAATTCATAGGCAATAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCACAGGTGGAATTAAAACACATTTGCAAATTCATAGGCAATAAC  150

seq1  ATGCTTAAAATGCATTTGTTTCATTAAGAACATCTCAAAATTTATAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTAAAATGCATTTGTTTCATTAAGAACATCTCAAAATTTATAAATA  200

seq1  ATTTAGAAGATTTTTAAATCATTTCCATCATTTCATTTGCAACACATTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAAGATTTTTAAATCATTTCCATCATTTCATTTGCAACACATTAG  250

seq1  TACATTGGCATTTAAAATGCCTTAAATATTGTATCCGGTAGTGGCTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGGCATTTAAAATGCCTTAAATATTGTATCCGGTAGTGGCTATAT  300

seq1  ATGCATGTATTTACTGCTTTCACCTAGTGAGTGAAATCCAAAATATCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGTATTTACTGCTTTCACCTAGTGAGTGAAATCCAAAATATCATA  350

seq1  TTTATGTAAAATTTATTTCTCTCCATTTTATTTTTATCTTATCTGTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTAAAATTTATTTCTCTCCATTTTATTTTTATCTTATCTGTTTCT  400

seq1  TCAACACTAACATTTTAATAACTGTGCACAGTTATTTTTTTTGGTTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACTAACATTTTAATAACTGTGCACAGTTATTTTTTTTGGTTTTTT  450

seq1  TTTTTTTTTTTTTTTTTGGTGAGGTTGTATTTATAATAAGTAATTAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTGGTGAGGTTGTATTTATAATAAGTAATTAAGAA  500

seq1  TCACACAGCTGGGTTCTTTTTCATCTGTATCTGGAAACCTTTCTGGATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAGCTGGGTTCTTTTTCATCTGTATCTGGAAACCTTTCTGGATAA  550

seq1  CTGTGTTCCTGACTACAAAATTCGGACAATTATAGGCATTACCCAAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTCCTGACTACAAAATTCGGACAATTATAGGCATTACCCAAAGTT  600

seq1  GTTCTGAATATTAGTGTAAATAATTAACATTAAAAAAATTGTGAAAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAATATTAGTGTAAATAATTAACATTAAAAAAATTGTGAAAAAAA  650

seq1  TGTGAACTTATGCATAAGTACTGAAAAGTAGGAATTAGATTAATTGTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACTTATGCATAAGTACTGAAAAGTAGGAATTAGATTAATTGTATT  700

seq1  AAACAAACAAGGGAAAAGTTGGCTATATTCTATCAGGTTATTCTATAAGA  750
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAACAAACAAGGGAAAAGTTGGCTATATTCTATCA-GTTATTCTATAAGA  749

seq1  CTTTTGTTTTTAAAATCATAGTGACCAATCATTTTATAGTCTACAATGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTTTTTAAAATCATAGTGACCAATCATTTTATAGTCTACAATGAG  799

seq1  CATGAAAGGAAGGAAACATAGTTACACATTCGAAAGGCAATACTGTCTGT  850
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CATGAAAGGAAGG-AACATAGTTACACATTCGAAAGGCAATACTGTCTGT  848

seq1  CAGATTTGTAAAACCTGCAGTCCAAGAGTTACAGGCATCCACATG-TAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAGATTTGTAAAACCTGCAGTCCAAGAGTTACAGGCATCCACATGTTAGC  898

seq1  CAAGGAGGAGGATGAAAGAAGCCCAATGTAAAATTGTAACATAA-TTAAA  948
      ||| || ||||||||||||||||||||||||| |||| |||||| |||||
seq2  CAAAGA-GAGGATGAAAGAAGCCCAATGTAAATTTGT-ACATAATTTAAA  946

seq1  TACTGACAACTTTAAGATTGATTTTTTAAAAATGATTCATCACAAGGTTC  998
      |||||||||||||| |||||||||||| ||||||| ||||||| | ||||
seq2  TACTGACAACTTTAGGATTGATTTTTT-AAAATGA-TCATCAC-ATGTTC  993

seq1  TC-ACATGTGAACTTTTCAAATGGCAATGTTGTATCACAATGTCAAAAGG  1047
      || ||||||| || ||||||   ||||||||||||||| ||||| ||| |
seq2  TCAACATGTG-ACCTTTCAA--TGCAATGTTGTATCAC-ATGTCCAAACG  1039

seq1  TCTGTCATCCCTCTAAGTGTTAAATTT  1074
      ||||||||||||||||||||  |||||
seq2  TCTGTCATCCCTCTAAGTGT--AATTT  1064


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