BAC Information

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BAC

Clone NameB6Ng01-317D15
Chromosome1 (Build37)
Map Location 105,596,062 - 105,596,912
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041067
Downstream geneLOC383546, LOC100041134
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317D15.bB6Ng01-317D15.g
ACCGA107426GA107427
length1,213852
definitionB6Ng01-317D15.b B6Ng01-317D15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataccccactcttaccaagtgattggtcattcagacaaaaact
aaacaaatgaataacaaaaataacagacattacaagtgaaatagaaataa
gaaacatctatagagtatttcacccaaacacaaaagaatacatattattt
tctggacctcagggacctattctaaaaattgaccatgtagttgttcacaa
agcaagactcaagtgatacaacaaaattgaaaaaatgccttgtatcatat
cagacaatcattgattaaagctagatgtcaaccacagcagaaacactaga
acacatacataatcatagaaagtgaacaattctactttcaataatctctg
agtcagggaagaaatatagaaagaatttaaagaccttttagaattcaatg
aaaatgaaggcataacacacctaaatttatggaacacaatgaaaacagtt
ttatgaggaaatttatagcactgtgtgcctccataaagaaattagaaagt
actaccaggaatttaaaggtacacccaaattctctagaaaaatgaagcaa
acacacctatgaggaatagaaggcagaatataatcaaaagcaggactaaa
attcatcagttagagacaatgaaaacaatacaaagaatcaatggaactaa
gtgctggttctttgaaaaaatcaactgtattttcaaaccctttactaaac
taaccaaaagacagagagacagtatccaaatcaacaaaacaagaaatgaa
aaggtagatagaacgatagacacttaagaaacttaaagaatcattatgtc
ttactttaaaagcctgtactccacaaaattgaaaaatcttaatggaatga
atgaatttgtagacagataccacttacaaaagttaaataaagatcaaata
aactatttaaaatatatatagcccctatagaaatagaagcagtcatcaat
attctccaaaaggtacccagggacaaatgattttagcacagaattataca
agaccatcaaagaagagctaatactaatattctaaactatcctccatttt
tttttgtatgaacacagtctgctatacctgaagcacacaatgagcacaag
agagactcacaccgattcctctatgacatcgatgcaaagtatgactatac
tccagactgaattcagaccatagaggttcattatttcaattgtgtcaaca
aagcccttctatc

gaattctctacataaaggaatcattgttgactaagctgcagaaaactata
tgaaccatggcaattattgtgagaaaaataatcataggtgtttttgagaa
aaactaagagaaaatagaccctccatattgatgtagatggttcctttgta
caataaaacttacaaattaaatcaatccaataccattaaatatgtattac
agaagtacaaaatgagttgaagaataataaatcaactgcctgtatagctg
ggaagagttttgagaaatttcggaaataactggtaaaaacccaaatacat
gccaagatttgtggtgcaagccctcaatcccagaggtaggtatgttgatc
tctttgagttcaagaccagcctgatctaaatagtcagtcccaaaatactc
actgcaaaataagagaaagaactcatctcaaagaattaaaaagaggaaga
tgaagcgaaaaagaaagagaaggagaaaggagaagaggaggagaaggagg
aggaggaggaagaagaagaactagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaaaaga
agaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aagatgagaagacgaagaagaagacgagaagaagagaggcattttgggca
ctaatgacatatctttttctagcaactatctttaaaataatagtttcact
tttcattgagtaaacctatgggttataatagacaaattccattccagata
tcataacctagcaactcttttaggacactgtaaccctgtctgaactgata
at
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_105596062_105596912
seq2: B6Ng01-317D15.g_67_917 (reverse)

seq1  TTATCAGTTCAGACATGGTTACAGTGTCCTAAAAGAGTTGCTAGGTTATG  50
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTATCAGTTCAGACAGGGTTACAGTGTCCTAAAAGAGTTGCTAGGTTATG  50

seq1  ATTTTCTGGAATGGAATTTGTCTATTATAAACCATAGGTTTACTCAATGA  100
      | | |||||||||||||||||||||||||| |||||||||||||||||||
seq2  A-TATCTGGAATGGAATTTGTCTATTATAACCCATAGGTTTACTCAATGA  99

seq1  AAAGTGAAAACTATTATTTTTAAAGATAGTTGCTAG-AAAAGATATGTCA  149
      |||||| ||||||||| ||||||||||||||||||| |||||||||||||
seq2  AAAGTG-AAACTATTA-TTTTAAAGATAGTTGCTAGAAAAAGATATGTCA  147

seq1  TTAGTGCCC-AAATGCCTCTCTTCTTCT--TCTTCTTCTTCTTCTTCTTC  196
      ||||||||| ||||||||||||||||||  ||||||||||| ||||| ||
seq2  TTAGTGCCCAAAATGCCTCTCTTCTTCTCGTCTTCTTCTTCGTCTTC-TC  196

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  246
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  246

seq1  CTTCTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT  296

seq1  TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAGTTCTTCTTCTTCCTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAGTTCTTCTTCTTCCTC  346

seq1  CTCCTCCTCCTTCTCCTCCTCTTCTCCTTTCTCCTTCTCTTTCTTTTTCG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTCCTTCTCCTCCTCTTCTCCTTTCTCCTTCTCTTTCTTTTTCG  396

seq1  CTTCATCTTCCTCTTTTTAATTCTTTGAGATGAGTTCTTTCTCTTATTTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCTTCCTCTTTTTAATTCTTTGAGATGAGTTCTTTCTCTTATTTT  446

seq1  GCAGTGAGTATTTTGGGACTGACTATTTAGATCAGGCTGGTCTTGAACTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGAGTATTTTGGGACTGACTATTTAGATCAGGCTGGTCTTGAACTC  496

seq1  AAAGAGATCAACATACCTACCTCTGGGATTGAGGGCTTGCACCACAAATC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGATCAACATACCTACCTCTGGGATTGAGGGCTTGCACCACAAATC  546

seq1  TTGGCATGTATTTGGGTTTTTACCAGTTATTTCCGAAATTTCTCAAAACT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATGTATTTGGGTTTTTACCAGTTATTTCCGAAATTTCTCAAAACT  596

seq1  CTTCCCAGCTATACAGGCAGTTGATTTATTATTCTTCAACTCATTTTGTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAGCTATACAGGCAGTTGATTTATTATTCTTCAACTCATTTTGTA  646

seq1  CTTCTGTAATACATATTTAATGGTATTGGATTGATTTAATTTGTAAGTTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTAATACATATTTAATGGTATTGGATTGATTTAATTTGTAAGTTT  696

seq1  TATTGTACAAAGGAACCATCTACATCAATATGGAGGGTCTATTTTCTCTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTACAAAGGAACCATCTACATCAATATGGAGGGTCTATTTTCTCTT  746

seq1  AGTTTTTCTCAAAAACACCTATGATTATTTTTCTCACAATAATTGCCATG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTCTCAAAAACACCTATGATTATTTTTCTCACAATAATTGCCATG  796

seq1  GTTCATATAGTTTTCTGCAGCTTAGTCAACAATGATTCCTTTATGTAGAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATATAGTTTTCTGCAGCTTAGTCAACAATGATTCCTTTATGTAGAG  846

seq1  AATTC  851
      |||||
seq2  AATTC  851


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