BAC Information

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BAC

Clone NameB6Ng01-317E18
Chromosome1 (Build37)
Map Location 8,724,000 - 8,724,816
singlet/doubletsinglet
Overlap geneSntg1
Upstream genenone
Downstream geneLOC100039474, LOC620444, EG665007, LOC665103, LOC100039464, EG620853, LOC665138, Rrs1, Adhfe1, LOC620542, 3110035E14Rik, Mybl1, Vcpip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317E18.bB6Ng01-317E18.g
ACCGA107477GA107478
length1,111823
definitionB6Ng01-317E18.b B6Ng01-317E18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaagttcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcaaaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgttaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagccaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatctagggatccaccccataatc
agcattcaaacgctgacaccattgcatacactagcaagattttattgaaa
aggacccagatgtagctgtctcttgtgagactatgccggggccctagcaa
acacagaaagtggatgctcacagtcacttatggatggatcatagggctcc
caatggaagggagctagagaaagtagcccaaggagctaaagggaatctgc
aaccctattaggtggaacaacaattatgaactaaccagtaccccgggagc
ttcttgactcttagctggcattatgtaatcaaaggaatgggcctatcggc
ctatcactctg
gaattccaaacattacacaatttcagaaattatctgtagctggtaaaact
ctgctagaacacacagaaaatcatagtcagctgctgcagacagtctaaac
tagacccatatcactacactgggattaaggtaaaagcatattcttataat
atttctgtgtttttaaaaaacaaaaattctagaatttttactatgtaaat
atgcatgtgcacacaggaatgtgtgtgtgtgttgagacctacctatgttt
gacaaaatctatcgtcaatttgtctcattctggtatgtgtgtggtatata
ttttgacctatcattcatttatctaatctatttctttttatttatgtgta
agtatttgtgtcagttatatacatgtgtttattatgcccatgtttatgaa
tgtgtaaatgtaactatgtgtggaggacaaagttcttcatggagtttctt
ctctatcactctatagcttatcatttgagatattgtctctttaatgaact
ccaaatttactgaatgagtaggcaatctaaatagcaagatcaaggggccc
acttgtcactacgtttacagtgctttggattacagaaatgggccaaattc
ttatgttgtgtgttggggatataaattcaggttgtacttgagtggcaggc
aaactttttgacagatccatttcttctagtctcaattctacctattgcta
aagaacaaaattcttagacctgaatgatgcagacttttccctgaattagg
tagatttatgatcttatatgggttattcccactctgagctttcattgaaa
tgaattgaaaaattatactcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_8724000_8724816
seq2: B6Ng01-317E18.g_69_891 (reverse)

seq1  AGTGAGTTATAATTTTTC-ACTCATTACAATGAAAGCTCAGAGT-GGAAT  48
      |||||| ||||||||||| | ||||| ||||||||||||||||| |||||
seq2  AGTGAG-TATAATTTTTCAATTCATTTCAATGAAAGCTCAGAGTGGGAAT  49

seq1  AACCCATATAAGATCATAAATCTACCTAATTCAGGGAAAAGTCTGCATCA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATATAAGATCATAAATCTACCTAATTCAGGGAAAAGTCTGCATCA  99

seq1  TTCAGGTCTAAG-ATTTTGTTCTTTAGCAATAGGTAGAATTGAGACTAG-  146
      |||||||||||| |||||||||||||||||||||||||||||||||||| 
seq2  TTCAGGTCTAAGAATTTTGTTCTTTAGCAATAGGTAGAATTGAGACTAGA  149

seq1  AGAAATGGATCTGTC-AAAAGTTTGCCTGCCACTCAAGTACAACCTGAAT  195
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGAAATGGATCTGTCAAAAAGTTTGCCTGCCACTCAAGTACAACCTGAAT  199

seq1  TTATATCCCCAACACAC-ACATAAGAATTTGGCCCATTTCTGTAATCC-A  243
      ||||||||||||||||| |||||||||||||||||||||||||||||| |
seq2  TTATATCCCCAACACACAACATAAGAATTTGGCCCATTTCTGTAATCCAA  249

seq1  AGCACTGTAAACGTAGTGACAAGTGGGCCCCTTGATCTTGCTATTTAGAT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGTAAACGTAGTGACAAGTGGGCCCCTTGATCTTGCTATTTAGAT  299

seq1  TGCCTACTCATTCAGTAAATTTGGAGTTCATTAAAGAGACAATATCTCAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACTCATTCAGTAAATTTGGAGTTCATTAAAGAGACAATATCTCAA  349

seq1  ATGATAAGCTATAGAGTGATAGAGAAGAAACTCCATGAAGAACTTTGTCC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAAGCTATAGAGTGATAGAGAAGAAACTCCATGAAGAACTTTGTCC  399

seq1  TCCACACATAGTTACATTTACACATTCATAAACATGGGCATAATAAACAC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACATAGTTACATTTACACATTCATAAACATGGGCATAATAAACAC  449

seq1  ATGTATATAACTGACACAAATACTTACACATAAATAAAAAGAAATAGATT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATAACTGACACAAATACTTACACATAAATAAAAAGAAATAGATT  499

seq1  AGATAAATGAATGATAGGTCAAAATATATACCACACACATACCAGAATGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAATGAATGATAGGTCAAAATATATACCACACACATACCAGAATGA  549

seq1  GACAAATTGACGATAGATTTTGTCAAACATAGGTAGGTCTCAACACACAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATTGACGATAGATTTTGTCAAACATAGGTAGGTCTCAACACACAC  599

seq1  ACACATTCCTGTGTGCACATGCATATTTACATAGTAAAAATTCTAGAATT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTCCTGTGTGCACATGCATATTTACATAGTAAAAATTCTAGAATT  649

seq1  TTTGTTTTTTAAAAACACAGAAATATTATAAGAATATGCTTTTACCTTAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTTAAAAACACAGAAATATTATAAGAATATGCTTTTACCTTAA  699

seq1  TCCCAGTGTAGTGATATGGGTCTAGTTTAGACTGTCTGCAGCAGCTGACT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTGTAGTGATATGGGTCTAGTTTAGACTGTCTGCAGCAGCTGACT  749

seq1  ATGATTTTCTGTGTGTTCTAGCAGAGTTTTACCAGCTACAGATAATTTCT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTCTGTGTGTTCTAGCAGAGTTTTACCAGCTACAGATAATTTCT  799

seq1  GAAATTGTGTAATGTTTGGAATTC  817
      ||||||||||||||||||||||||
seq2  GAAATTGTGTAATGTTTGGAATTC  823