BAC Information

Click to search

BAC

Clone NameB6Ng01-318C02
Chromosome1 (Build37)
Map Location 148,703,492 - 148,704,482
singlet/doubletsinglet
Overlap geneB830045N13Rik
Upstream geneLOC383571, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318C02.bB6Ng01-318C02.g
ACCGA108096GA108097
length1,0021,104
definitionB6Ng01-318C02.b B6Ng01-318C02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaattttcacaaagttaaaaatagttttctcggtctagtcggc
catcaattggaggagaggccctaggtcttgtgaaggtcatatgccccagt
acaggggaatgccagggccaggaagcaggagtgggtgggttagggagcag
ggcaggggggcggcgtataggaggctttggggatagcatttgaaacgtaa
atgaagaaaatatctaataaaaaataaaaaaatagttttctctgaaattg
ctacaactttaatttttacatccattatctcactactctcttctaagcat
tacctcattatgcttactgccttaaggtttcaatcatttccttgtttaga
tagttgcatgaagctatcaagctttgcttgagtaccaccagccttatgtt
aatggatacactgagtaaagaaatctccacattgtcttcagttttcttat
tgctttcagattctgaagtcatttaaaatatctagacactatatatagtt
tatcctcatatatccctaaattaacctaaatttttagagctgatggaaca
gcttttgttttcatttttgtagtacagagaaatttataagctatagaatc
tgcttagtggatatttattgacaatgaaaatgacaacagcgatacagcat
ggcatttaaataaatcattccaatttaaatcactggggacaattttagaa
ggagcgtttatctattgtgtgcatttaagaggcagatttggagcacaaag
catcatgtgtaacactgtgtggtagacagacaaaatcggcatcattttca
tttctgactctaggaaatggaaatgggaaaactgatgttggaacggagag
ggagagaaagtagatgtttcgagcaatatgctgtacatgtccatgagctt
gactactgtatctaagggaagcccaaaatagctgctttacatttaactaa
aatctttgacgatacaagtgaatcagcttatcgaactgatcatgagaaaa
ta
gaattcctgatttttccaagacttttgtcatgaatgggtgttggattttg
tcaaatgctttctccgcatctaatggatcatatggtttttgtctttgtgt
ttgtttatatactggattaagttgatggatttccatatattgaaccatcc
ctgcatccatgggaagaaacctacttggttaggatggatgattgttttga
tgtattcttggattcatttacagagaactttattgagtatttttgcattg
atattcataagggaaattgatctgaagttctctatctttgttgggtcttt
ttgtggtttaggtatcagagtaattgtgtcttcagtgaatgagttgggta
gagtaccttctgtttctaatttgtggaatagtttgtgaagaactgggatt
agatcttctttgaaggtctgatagaactctgcactaaactcatctggtcc
tgggctttttttgtttgggagactattaatgactgcttctatttctttgt
aatataggactgtttagatcattaacctgatcttgatttaactttggtac
ctggtatctttctagaaacatgtccatttcatccatgttctccagttttg
ttgagtgtagccttttgtagaagaatctgatggtgttttggatttcttca
ggatctgttgttatgactcccttttcacttctgattttgttgattaggat
gtgtcctctagtgagtctggctaagggtttatctatcttcttgattttct
caaaaatccagctacttgtttgggttgattctttgaatagttcttgtttc
caattggttgatttcgcccctgagtttgattatttcctgctgtctactcc
tcttgggtgaatttgcttcccttttgttctagagcttttaggtgtgttgt
caagctgctaatgtgtgctgtctctagttttcttttttggagatactcag
agctatgagttttcttctagaactgcttcatgttgtcccacaagtttgag
tttgttgtggcatcattttcaataactccaaaaaggaccttaaattcctt
tcttatgctcttggaccaaggcatcatttggaaaggagtggatgtctagc
gtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148703492_148704482
seq2: B6Ng01-318C02.b_41_1042 (reverse)

seq1  TATTTTCTCATGA--CGTTCAAGAAGCTAAT--CCCTGTATCTTCAAAGA  46
      |||||||||||||   |||| | ||||| ||   | |||||| |||||||
seq2  TATTTTCTCATGATCAGTTCGATAAGCTGATTCACTTGTATCGTCAAAGA  50

seq1  TTTTAGTTAAATATAAA-CA-CTAATTTGGGCTTCCCTTAGCTACAG-AG  93
      |||||||||||| |||| || ||| |||||||||||||||| ||||| ||
seq2  TTTTAGTTAAATGTAAAGCAGCTATTTTGGGCTTCCCTTAGATACAGTAG  100

seq1  TTAAGCTCATGGAAATGTACAGCA-ATTGCACGAAACAACTACTTTCTCT  142
      | ||||||||||| |||||||||| ||||| ||||||| |||||||||||
seq2  TCAAGCTCATGGACATGTACAGCATATTGCTCGAAACATCTACTTTCTCT  150

seq1  -CCTCTCC-TTCCAACATCAGTTTTCCCATTTCCATTTCCTAGAGTCAGA  190
       ||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCCGTTCCAACATCAGTTTTCCCATTTCCATTTCCTAGAGTCAGA  200

seq1  AATG-AAATGATGCCGATTTTGTCTGTCTACCACACAGTGTTACACATGA  239
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAATGATGCCGATTTTGTCTGTCTACCACACAGTGTTACACATGA  250

seq1  TGCTTTGTGCTCCAAATCTGCCTCTTAAATGCACACAATAGATAAACGCT  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGTGCTCCAAATCTGCCTCTTAAATGCACACAATAGATAAACGCT  300

seq1  CCTTCTAAAATTGTCCCCAGTGATTTAAATTGGAATGATTTATTTAAATG  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTAAAATTGTCCCCAGTGATTTAAATTGGAATGATTTATTTAAATG  350

seq1  CCATGCTGTATCGCTGTTGTCATTTTCATTGTCAATAAATATCCACTAAG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTGTATCGCTGTTGTCATTTTCATTGTCAATAAATATCCACTAAG  400

seq1  CAGATTCTATAGCTTATAAATTTCTCTGTACTACAAAAATGAAAACAAAA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCTATAGCTTATAAATTTCTCTGTACTACAAAAATGAAAACAAAA  450

seq1  GCTGTTCCATCAGCTCTAAAAATTTAGGTTAATTTAGGGATATATGAGGA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTCCATCAGCTCTAAAAATTTAGGTTAATTTAGGGATATATGAGGA  500

seq1  TAAACTATATATAGTGTCTAGATATTTTAAATGACTTCAGAATCTGAAAG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTATATATAGTGTCTAGATATTTTAAATGACTTCAGAATCTGAAAG  550

seq1  CAATAAGAAAACTGAAGACAATGTGGAGATTTCTTTACTCAGTGTATCCA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGAAAACTGAAGACAATGTGGAGATTTCTTTACTCAGTGTATCCA  600

seq1  TTAACATAAGGCTGGTGGTACTCAAGCAAAGCTTGATAGCTTCATGCAAC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATAAGGCTGGTGGTACTCAAGCAAAGCTTGATAGCTTCATGCAAC  650

seq1  TATCTAAACAAGGAAATGATTGAAACCTTAAGGCAGTAAGCATAATGAGG  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAACAAGGAAATGATTGAAACCTTAAGGCAGTAAGCATAATGAGG  700

seq1  TAATGCTTAGAAGAGAGTAGTGAGATAATGGATGTAAAAATTAAAGTTGT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTTAGAAGAGAGTAGTGAGATAATGGATGTAAAAATTAAAGTTGT  750

seq1  AGCAATTTCAGAGAAAACTATTTTTTTATTTTTTATTAGATATTTTCTTC  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTTCAGAGAAAACTATTTTTTTATTTTTTATTAGATATTTTCTTC  800

seq1  ATTTACGTTTCAAATGCTATCCCCAAAGCCTCCTATACGCCGCCCCCCTG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACGTTTCAAATGCTATCCCCAAAGCCTCCTATACGCCGCCCCCCTG  850

seq1  CCCTGCTCCCTAACCCACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTCCCTAACCCACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCT  900

seq1  GTACTGGGGCATATGACCTTCACAAGACCTAGGGCCTCTCCTCCAATTGA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGGGCATATGACCTTCACAAGACCTAGGGCCTCTCCTCCAATTGA  950

seq1  TGGCCGACTAGACCGAGAAAACTATTTTTAACTTTGTGAAAATTGTGAAT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGACTAGACCGAGAAAACTATTTTTAACTTTGTGAAAATTGTGAAT  1000

seq1  TC  991
      ||
seq2  TC  1002