BAC Information

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BAC

Clone NameB6Ng01-321G22
Chromosome1 (Build37)
Map Location 104,063,982 - 104,065,090
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041909, LOC100040993, LOC383650
Downstream geneLOC100041056, LOC100041067
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321G22.bB6Ng01-321G22.g
ACCGA110538GA110539
length1,1201,100
definitionB6Ng01-321G22.b B6Ng01-321G22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttatcatatttaggtatgggcttcgaattcctgatcttttca
agacttttatcatgaatgggtgttggatttgtcaaatgctttctcgatga
gatgatcatgtgatttttgtctttgagattgtttatagtggattacattg
aaggatttctgtacattaaaccatccctgcatccctggaataaaacctac
ttggtcaggatggatgattgttttgatgttttcttggattccattagcga
gaatttttatgtgtatttttgtatagatattcataagggaaagtgatctg
aaattctctatgtttattgggtctttttgtggttaaggtatcagagtaat
tgtggcttcatagaatgaattgggtggagtaccttctgcttctattttgt
ggaatacttttgaagaactggaattagatcttctttgaaggtctgaaaga
actctgcactaaacccatctggtcctgggctttttttttttttttttttt
ttttttttttttttttggttggagagtattaatgactgattttattactt
taggggttataggtctgtttagatcattaatctgattgtgatttaacttt
ggcacctgttatctgtctagaaatttgtccatttcatccagattctccag
ttttgttgagtatagccttttgtagaaggatgtgttgctgttttggattt
tttcaggatctgttggtatgtctcctttttcatttctgattttgataatt
aggatgttgtccctgtgccctttagtggagtctggctaagggattatcta
tcttgttgatttttctcaaagattccgctccttggttgggtgattctttg
gataggtcttctgttccacctgggtgattccccctgagtttgatatttct
gccgtctactcctcttgggtaattgcttccttttttctagagctttagat
gtgttgtcagctgctagtgtgtgctccttagttctttggtggcactcaga
gctttggagttcctcttagaatgccttcatgggtccataagtttgaatgt
ggggcttcattcataactctaaagattaattcttctatctctgacagtta
cctgaaagactgttgttcag

gaattcactgctattgggaccttcaatctaagtcccggctgccgttaatt
acttgcaagtcataaataccactcctgttccttcaggaatatcttgccat
atttgtaattattgtggtatataagcattatagccagatatggatagtga
ctgctttcctatgtggcatctttcatggttcctttcaacactattgcagc
taatcctcaggaaggcctcaagctcagatctgcattgatttttccaagta
atgtgttgaaagtttgtggtatcttctgcagtaggtttgaaattctggca
ccactaatgacaacagttatatcctgtattgtttgtgttctcttggatgt
ccctaactaataattcaaaacttttcctaaactaggatttttgttagata
aataataggttttatttgtgggtatgcattgtccttcaaagtagtataac
tttaatatatatacatatatatgcacatataatatgcaaacatatgcaaa
attgaataaacacaaaatattataatttcttaggccttttcacaccattt
tattatttatctagccactttgatctttaaataatgttcaattcaaaaat
taatatctctagtgtccatttctccatgtatatgggtgagaaaacaaata
agagaaataccttcaaaactctggcaaacaccagacattgtggcctgttt
ctttagttgtagcactctggaggccaaagcaggcatgaataacacagtgt
gttccatgccccaagaatccaagcaaaattttgttggcatgttgttatat
atagtcttattacttttaaggtgtaaaagcaaaaaccgtggcataaagta
cttgctatagaaacatgaaaggcctatgtttacaggtgaacatgaactct
cttaagaaaataagtgagaagcaaacacaaggttgtcgcagattctccct
gtccaattatattagtgaagaattggtctgtgattggacatgggaaagag
agtgagctaagaatgcagaagacaagagcatctcagagtagatcaaagaa
gatggctacaaaacatgaatccacatgcatttcagtcacaagtatttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_104063982_104065090
seq2: B6Ng01-321G22.g_67_1166 (reverse)

seq1  CACAAATACTTGTGACTGGAAAATGCCATGTGGATTCATG-TTTGTAGCC  49
      ||||||||||||||||||  ||||| |||||||||||||| |||||||||
seq2  CACAAATACTTGTGACTG--AAATG-CATGTGGATTCATGTTTTGTAGCC  47

seq1  ATCTTCCTTTGATCTTACTCTGAGATGCTCCTTGTC-TCTGCAATTCTTA  98
      ||||| |||||||| |||||||||||||| |||||| ||||| |||||||
seq2  ATCTT-CTTTGATC-TACTCTGAGATGCT-CTTGTCTTCTGC-ATTCTTA  93

seq1  GCTCCACCTCTCTTTCCCATGTCCAATCACAGACCAATTCTTCACTAATA  148
      ||||   |||||||||||||||||||||||||||||||||||||||||||
seq2  GCTC--ACTCTCTTTCCCATGTCCAATCACAGACCAATTCTTCACTAATA  141

seq1  TAATTGGACAGGGAGAATCCTGCGACAACCTTGTTGTTTGCTTCCTCACT  198
      |||||||||||||||||| |||||||||||||| ||||||||| ||||||
seq2  TAATTGGACAGGGAGAAT-CTGCGACAACCTTG-TGTTTGCTT-CTCACT  188

seq1  TATTTTCTTAAGAGAGTTCATGTTCACCTGTAAACATAGGCC-TTCATGT  247
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TATTTTCTTAAGAGAGTTCATGTTCACCTGTAAACATAGGCCTTTCATGT  238

seq1  TTCTATAGCAAGTACTTTATGCCACGGTTTTTGCTTTTACACCTTAAAAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAGCAAGTACTTTATGCCACGGTTTTTGCTTTTACACCTTAAAAG  288

seq1  TAATAAGACTATATATAACAACATGCCAACAAAATTTTGCTTGGATTCTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGACTATATATAACAACATGCCAACAAAATTTTGCTTGGATTCTT  338

seq1  GGGGCATGGAACACACTGTGTTATTCATGCCTGCTTTGGCCTCCAGAGTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCATGGAACACACTGTGTTATTCATGCCTGCTTTGGCCTCCAGAGTG  388

seq1  CTACAACTAAAGAAACAGGCCACAATGTCTGGTGTTTGCCAGAGTTTTGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAACTAAAGAAACAGGCCACAATGTCTGGTGTTTGCCAGAGTTTTGA  438

seq1  AGGTATTTCTCTTATTTGTTTTCTCACCCATATACATGGAGAAATGGACA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTTCTCTTATTTGTTTTCTCACCCATATACATGGAGAAATGGACA  488

seq1  CTAGAGATATTAATTTTTGAATTGAACATTATTTAAAGATCAAAGTGGCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGATATTAATTTTTGAATTGAACATTATTTAAAGATCAAAGTGGCT  538

seq1  AGATAAATAATAAAATGGTGTGAAAAGGCCTAAGAAATTATAATATTTTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAATAATAAAATGGTGTGAAAAGGCCTAAGAAATTATAATATTTTG  588

seq1  TGTTTATTCAATTTTGCATATGTTTGCATATTATATGTGCATATATATGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTCAATTTTGCATATGTTTGCATATTATATGTGCATATATATGT  638

seq1  ATATATATTAAAGTTATACTACTTTGAAGGACAATGCATACCCACAAATA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATTAAAGTTATACTACTTTGAAGGACAATGCATACCCACAAATA  688

seq1  AAACCTATTATTTATCTAACAAAAATCCTAGTTTAGGAAAAGTTTTGAAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTATTATTTATCTAACAAAAATCCTAGTTTAGGAAAAGTTTTGAAT  738

seq1  TATTAGTTAGGGACATCCAAGAGAACACAAACAATACAGGATATAACTGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTTAGGGACATCCAAGAGAACACAAACAATACAGGATATAACTGT  788

seq1  TGTCATTAGTGGTGCCAGAATTTCAAACCTACTGCAGAAGATACCACAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTAGTGGTGCCAGAATTTCAAACCTACTGCAGAAGATACCACAAA  838

seq1  CTTTCAACACATTACTTGGAAAAATCAATGCAGATCTGAGCTTGAGGCCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAACACATTACTTGGAAAAATCAATGCAGATCTGAGCTTGAGGCCT  888

seq1  TCCTGAGGATTAGCTGCAATAGTGTTGAAAGGAACCATGAAAGATGCCAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGGATTAGCTGCAATAGTGTTGAAAGGAACCATGAAAGATGCCAC  938

seq1  ATAGGAAAGCAGTCACTATCCATATCTGGCTATAATGCTTATATACCACA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAAGCAGTCACTATCCATATCTGGCTATAATGCTTATATACCACA  988

seq1  ATAATTACAAATATGGCAAGATATTCCTGAAGGAACAGGAGTGGTATTTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTACAAATATGGCAAGATATTCCTGAAGGAACAGGAGTGGTATTTA  1038

seq1  TGACTTGCAAGTAATTAACGGCAGCCGGGACTTAGATTGAAGGTCCCAAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGCAAGTAATTAACGGCAGCCGGGACTTAGATTGAAGGTCCCAAT  1088

seq1  AGCAGTGAATTC  1109
      ||||||||||||
seq2  AGCAGTGAATTC  1100


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