MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-321M14
Chromosome	1 (Build37)
Map Location	77,632,205 - 77,760,322
singlet/doublet	doublet
Overlap gene	none
Upstream gene	LOC100039137, Tfdp1-ps, Epha4, LOC100039330
Downstream gene	Pax3, LOC100039210, Sgpp2, LOC100039382, Farsb, Mogat1, Acsl3, Utp14b
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039137 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039137
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein pseudo : _no_value

name	Tfdp1-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21782 MGI:109560
definition	note : transcription factor Dp 1, pseudogene pseudo : _no_value

name	Epha4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13838 MGI:98277
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039330 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039330
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Pax3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18505 MGI:97487
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039210 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039210
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein

name	Sgpp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433323 MGI:3589109
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039382 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039382
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Farsb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23874 MGI:1346035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mogat1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68393 MGI:1915643
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acsl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74205 MGI:1921455
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Utp14b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:195434 MGI:2445092
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Epha4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86788142 GeneID:13838 MGI:98277
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Eph receptor A4 transcript_id : NM_007936.3

name	LOC100039330 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234122 GeneID:100039330
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100039330 transcript_id : XM_001472811.1

name	Pax3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349183 GeneID:18505 MGI:97487
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paired box gene 3 transcript_id : NM_008781.3

name	LOC100039210 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234116 GeneID:100039210
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein product : hypothetical protein LOC100039210 transcript_id : XM_001472451.1

name	Sgpp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119709820 GeneID:433323 MGI:3589109
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sphingosine-1-phosphate phosphotase 2 transcript_id : NM_001004173.2

name	LOC100039382 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234125 GeneID:100039382
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100039382 transcript_id : XM_001473028.1

name	Farsb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362293 GeneID:23874 MGI:1346035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phenylalanyl-tRNA synthetase, beta subunit transcript_id : NM_011811.3

name	Mogat1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801941 GeneID:68393 MGI:1915643
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : monoacylglycerol O-acyltransferase 1 transcript_id : NM_026713.2

name	Acsl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75992919 GeneID:74205 MGI:1921455
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-CoA synthetase long-chain family member 3 transcript_id : NM_028817.2

name	Acsl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75992921 GeneID:74205 MGI:1921455
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-CoA synthetase long-chain family member 3 transcript_id : NM_001033606.1

name	Utp14b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75992942 GeneID:195434 MGI:2445092
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast) transcript_id : NM_001001981.2

name	Epha4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328113 GeneID:13838 MGI:98277
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005003 - ephrin receptor activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007628 - adult walking behavior [Evidence IMP]; GO:0007411 - axon guidance [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 note : rabbit; snoRNA MBII-267 product : Eph receptor A4 protein_id : NP_031962.2

name	LOC100039330 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234123 GeneID:100039330
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472861.1

name	Pax3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982139 CCDS:CCDS15082.1 GeneID:18505 MGI:97487
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence TAS] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003705 - RNA polymerase II transcription factor activity, enhancer binding [Evidence IDA] [Evidence IGI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0016566 - specific transcriptional repressor activity [Evidence IDA]; GO:0003700 - transcription factor activity [Evidence TAS] [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0016477 - cell migration [Evidence IMP]; GO:0008283 - cell proliferation [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0007507 - heart development [Evidence IMP]; GO:0007517 - muscle development [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0001755 - neural crest cell migration [Evidence IMP]; GO:0001843 - neural tube closure [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence TAS]; GO:0048066 - pigmentation during development [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007367 - segment polarity determination [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : paired box gene 3 protein_id : NP_032807.2

name	LOC100039210 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234117 GeneID:100039210
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472501.1

name	Sgpp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51921345 CCDS:CCDS15083.1 GeneID:433323 MGI:3589109
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 product : sphingosine-1-phosphate phosphotase 2 protein_id : NP_001004173.1

name	LOC100039382 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234126 GeneID:100039382
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473078.1

name	Farsb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981400 CCDS:CCDS15084.1 GeneID:23874 MGI:1346035
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA] GO_process : GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 note : phenylalanine tRNA synthetase alpha; PheRS alpha; phenylalanine-tRNA synthetase-like product : phenylalanine-tRNA synthetase-like, beta subunit protein_id : NP_035941.2

name	Mogat1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18426805 CCDS:CCDS15085.1 GeneID:68393 MGI:1915643
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0003846 - 2-acylglycerol O-acyltransferase activity [Evidence IDA]; GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0004144 - diacylglycerol O-acyltransferase activity [Evidence IDA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006651 - diacylglycerol biosynthesis [Evidence IDA]; GO:0006071 - glycerol metabolism [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : diacylglycerol O-acyltransferase 2-like; diacylglycerol O-acyltransferase 2-like 1 product : monoacylglycerol O-acyltransferase 1 protein_id : NP_080989.1

name	Utp14b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75992943 CCDS:CCDS15086.1 GeneID:195434 MGI:2445092
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007126 - meiosis [Evidence IEA]; GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IMP] codon_start : 1 note : juvenile spermatogonial depletion product : UTP14, U3 small nucleolar ribonucleoprotein, homolog B protein_id : NP_001001981.2

name	Acsl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75992922 CCDS:CCDS15087.1 GeneID:74205 MGI:1921455
definition	EC_number : 6.2.1.3 GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA] GO_process : GO:0006631 - fatty acid metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : fatty acid Coenzyme A ligase, long chain 3 product : acyl-CoA synthetase long-chain family member 3 protein_id : NP_001028778.1

name	Acsl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75992920 CCDS:CCDS15087.1 GeneID:74205 MGI:1921455
definition	EC_number : 6.2.1.3 GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA] GO_process : GO:0006631 - fatty acid metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : fatty acid Coenzyme A ligase, long chain 3 product : acyl-CoA synthetase long-chain family member 3 protein_id : NP_083093.2

name	(CDS detail)
type	STS
link
xref	UniSTS:125238
definition	standard_name : MHAa59g5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128501
definition	standard_name : D1Mit162

name	(CDS detail)
type	STS
link
xref	UniSTS:128805
definition	standard_name : D1Mit436

name	(CDS detail)
type	STS
link
xref	UniSTS:122771
definition	standard_name : 04.MMHAP27FLB1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128467
definition	standard_name : D1Mit132

name	(CDS detail)
type	STS
link
xref	UniSTS:123991
definition	standard_name : 32.MMHAP5FLC5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:124058
definition	standard_name : 33.MMHAP94FRC12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:234159
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:178416
definition	standard_name : AI385584

name	(CDS detail)
type	STS
link
xref	UniSTS:128690
definition	standard_name : D1Mit332

name	(CDS detail)
type	STS
link
xref	UniSTS:272208
definition	standard_name : PMC23772P1

name	(CDS detail)
type	STS
link
xref	UniSTS:128598
definition	standard_name : D1Mit253

name	(CDS detail)
type	STS
link
xref	UniSTS:125811
definition	standard_name : X59358

name	(CDS detail)
type	STS
link
xref	UniSTS:158816
definition	standard_name : X59358

name	(CDS detail)
type	STS
link
xref	UniSTS:144125
definition	standard_name : Pax3

name	(CDS detail)
type	STS
link
xref	UniSTS:128557
definition	standard_name : D1Mit215

name	(CDS detail)
type	STS
link
xref	UniSTS:178418
definition	standard_name : AI594674

name	(CDS detail)
type	STS
link
xref	UniSTS:234158
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:162733
definition	standard_name : RH126021

name	(CDS detail)
type	STS
link
xref	UniSTS:224426
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:224637
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:91152
definition	standard_name : RH80004

name	LOC100039137 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234115 GeneID:100039137
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein product : similar to Ac2-210 pseudo : _no_value transcript_id : XR_030663.1

clone name	MSMg01-495G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481J12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-457I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100J17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-321M14.b	B6Ng01-321M14.g
ACC	GA110803	GA110804
length	849	906
definition	B6Ng01-321M14.b	B6Ng01-321M14.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(77,632,205 - 77,633,052)	(77,759,403 - 77,760,322)
sequence	gaattcttcttgcctctgctaaaaatactgaaaaattttgcttttatttt aaatgtaccatatgcatcctgccagacccaaaggatgcccgaatttcttc ccttttaggataatttatattcctgcagcaaaatctgccctttacaattt ctcttaattatttcaagactagagctatgcaagcttgaagggttactcgt gaagaagggtatctagcagtgtgaccctgggaaattgagttctgattcac ttagacacctaggaatacagcaaacatatcagagtgcttcctagtgttgt caaaaactcttttaaaatgacaaacagcttctcaaaggacctctgagctc ctttcccgagtggcaaagacaatagcttctggaccccttcaatcggaagc tgcctggccttctgctccacgtggcagccagctgtgcttattcaattaat ttctttacacatagcaaaataactcatctccttggtgtgccttttgacat tttaggggttcatcccatgttttaaagaaggaaaaaaaatactcctgaag gattgtttcatgtgcagtcaaaacctgggaactgtctgcatcataaaaac atttgggtaattttctgtttatcaatggatcagtgacctttattaccctt ataatccattcactttaataatctgtcactggtttctgcaagtgttgcta cgctgcggtctgtggtggtttgaaagaaaatgtcttctctaggctctctc agatgtttgattacttggtccccagttggtggctttgtttgggttggctt aggaggtgtggccttgctggaagatgtctgttactgggggggtgggggg	gaattcaggtcctttggaagagcaccctcaacttttagctactgatccac ctctctagctctacataggtctttttgaaagcagaaagaatctgcaaaaa tatcttgggcttcctcagttgtttgaaaattggccactagattttattgg ttgtggcaggggatgatagaaactttctgataggaaaaggggcctcatag atctatctggatcttcctttaaccagaatctcctggtggtagaaacttcc cactcagattgctttgtaccattcgtatgaattacacacacacacacaca cacacacacacacacacacacacacacagagagagagagagagagagaga gagagagagagagagagagagagagagagagagagagtgtgagagagaga gaggggaatacagagacagagagagagatagacatagacacctgaccacc accacccccagcccagtgagctatgtctttataacaagaaacatggctag aaatctgaaaattgaaacagacaactttatctagagtccaaagtgtttat tcccagtgtggtatttctccaaaattatctttttccttgcatggccaatc ctttccagctgcacaagcagaagcagtcatccggtcttcatcaaatacag acactaagtgtcaggtagagttagaaagctagaactattcactgggacaa ttttcctctttaaagcaactttattggcttctctttagaattggaagcag agatgtactatccaccctaaatggatggaaccacttaacatttcaccttt ttgggttaatttcttcctttctttcagttttccccttttagtaacttctt cctcctcagtctgactttctgactctgcagcgggcaagtacgttcaatga ttggaa
quality values	Open. Hide. 62 41 33 29 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 59 62 62 62 59 62 62 62 62 62 59 56 51 59 33 28 56 59 62 54 62 62 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 54 62 46 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 54 58 58 58 58 58 58 58 54 54 58 52 28 38 54 54 58 58 58 58 46 49 58 58 52 58 58 49 49 52 58 58 58 58 58 58 54 51 54 58 58 54 58 58 58 58 58 41 58 42 38 58 58 50 58 58 53 53 58 58 58 58 51 58 54 58 58 53 58 51 54 43 58 58 58 58 41 58 50 48 58 58 58 58 58 58 54 51 58 52 49 50 58 58 49 51 49 44 48 54 58 58 58 58 51 52 52 46 37 58 58 51 50 58 54 42 58 41 52 51 47 33 58 51 58 49 49 41 49 49 54 51 58 32 37 50 37 49 54 49 41 51 49 54 54 54 51 54 51 53 49 54 51 51 53 42 54 49 49 42 51 54 54 49 52 54 52 52 51 44 54 53 54 47 38 38 46 40 51 42 47 54 52 45 53 51 37 34 33 45 40 52 40 51 46 42 42 40 46 37 44 44 40 40 31 47 41 53 52 52 34 47 38 32 52 33 31 52 51 45 53 52 53 34 52 51 53 39 31 51 32 45 45 53 34 31 35 34 31 25 46 30 42 43 42 31 31 31 30 23 37 24 51 30 47 41 30 33 18 42 31 31 23 27 31 51 30 33 42 36 28 31 30 46 30 42 43 31 42 33 28 42 47 31 32 31 48 43 36 46 43 31 38 42 30 29 42 29 30 14 30 42 18 36 29 39 31 36 38 22 30 31 35 32 31 38 30 18 30 42 26 31 22 31 31 31 30 39 31 38 31 30 31 31 46 46 46 46 46 26 13 22 41 41 44 44 44	Open. Hide. 62 59 62 49 62 59 49 59 62 62 62 49 54 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 59 59 62 62 59 62 59 62 62 59 62 62 59 49 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 46 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 38 33 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 49 49 58 49 49 58 49 58 58 58 58 58 49 58 49 49 49 49 58 58 58 58 39 38 38 49 58 58 58 58 58 58 58 58 58 58 58 39 41 41 38 39 41 47 50 58 58 58 58 58 58 58 58 58 58 49 41 41 58 51 51 49 58 50 50 58 48 49 58 51 54 58 51 58 51 58 54 58 43 58 58 44 41 44 54 58 58 58 50 58 58 54 58 58 58 49 38 58 49 51 58 58 58 58 58 53 58 54 58 58 44 44 44 44 58 44 51 51 47 51 44 31 34 46 49 54 54 54 54 54 54 49 49 54 54 54 51 54 54 54 54 54 54 51 46 51 54 44 42 51 54 54 51 49 44 44 47 44 44 51 47 54 54 42 54 54 54 47 51 51 47 47 46 40 40 49 51 53 53 53 52 52 46 33 40 40 47 40 40 40 41 34 38 40 40 40 46 51 41 33 40 29 33 40 33 33 31 51 51 51 51 51 46 35 51 46 33 46 46 45 46 34 30 51 46 38 41 46 31 46 46 37 46 46 46 46 38 40 33 46 46 37 37 40 46 33 28 22 27 43 42 34 30 21 36 46 29 22 22 41 32 29 32 31 29 32 29 34 38 36 34 30 46 30 29 29 34 24 31 38 26 38 31 41 41 46 25 35 35 46 38 31 36 35 36 38 29 21 36 35 32 32 29 32 35 35 26 26 28 28 29 48 32 36 36 38 43 25 30 26 44 16 19 15 28 29 36 44 31 30 22 21 20 29 39 17 13 31 26 31 31 31 28 30 22 34 27 24 20 18 15 28 33 43 31 10 22 30 28 29 25 33 28 20 37 22 13 11 18 30 18 9 37 21 31 28 17 31 25 14 29 15 18 22 26 25 40 30 22 18 20 12 11 21 20 21 15 17 12 27 18 30 27 11 15 23 30 14 16 27 26 27 18 27 28 28 27 34 27 15 16 20 20 13 32 30 28 17 24 20 13 14 17 11 13 22 25 15 17 17 8 15 27 30 20 12 15 11 21 25 30 30 30 26 11 31 20 23 11 21 22 18 22 17 26 13 3 4 16 17 27 14 10 7 20 17 14 22 17 21 22 24 8 11 26 23 17 22 22 22 6 14 12 7 9 22 21 10 17 13 2 3 15 13 3 2 12 10 11 16 14 12 14 9 12 18 9 24 26 11 17 8 16 28 10 13 24 10 23 18 12 8 21 24 28 24 10 22 27 14 12 21 12 9 15 10 22 18 6 13 6 13 20 16 6 9 12 18

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_77632205_77633052
seq2: B6Ng01-321M14.b_47_895

seq1  GAATTCTTCTTGCCTCTGCTAAAAATACTGAAAAATTTTGCTTTTATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTGCCTCTGCTAAAAATACTGAAAAATTTTGCTTTTATTTT  50

seq1  AAATGTACCATATGCATCCTGCCAGACCCAAAGGATGCCCGAATTTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTACCATATGCATCCTGCCAGACCCAAAGGATGCCCGAATTTCTTC  100

seq1  CCTTTTAGGATAATTTATATTCCTGCAGCAAAATCTGCCCTTTACAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAGGATAATTTATATTCCTGCAGCAAAATCTGCCCTTTACAATTT  150

seq1  CTCTTAATTATTTCAAGACTAGAGCTATGCAAGCTTGAAGGGTTACTCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAATTATTTCAAGACTAGAGCTATGCAAGCTTGAAGGGTTACTCGT  200

seq1  GAAGAAGGGTATCTAGCAGTGTGACCCTGGGAAATTGAGTTCTGATTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGGGTATCTAGCAGTGTGACCCTGGGAAATTGAGTTCTGATTCAC  250

seq1  TTAGACACCTAGGAATACAGCAAACATATCAGAGTGCTTCCTAGTGTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACACCTAGGAATACAGCAAACATATCAGAGTGCTTCCTAGTGTTGT  300

seq1  CAAAAACTCTTTTAAAATGACAAACAGCTTCTCAAAGGACCTCTGAGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACTCTTTTAAAATGACAAACAGCTTCTCAAAGGACCTCTGAGCTC  350

seq1  CTTTCCCGAGTGGCAAAGACAATAGCTTCTGGACCCCTTCAATCGGAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCGAGTGGCAAAGACAATAGCTTCTGGACCCCTTCAATCGGAAGC  400

seq1  TGCCTGGCCTTCTGCTCCACGTGGCAGCCAGCTGTGCTTATTCAATTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGCCTTCTGCTCCACGTGGCAGCCAGCTGTGCTTATTCAATTAAT  450

seq1  TTCTTTACACATAGCAAAATAACTCATCTCCTTGGTGTGCCTTTTGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTACACATAGCAAAATAACTCATCTCCTTGGTGTGCCTTTTGACAT  500

seq1  TTTAGGGGTTCATCCCATGTTTTAAAGAAGGAAAAAAAATACTCCTGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGGGTTCATCCCATGTTTTAAAGAAGGAAAAAAAATACTCCTGAAG  550

seq1  GATTGTTTCATGTGCAGTCAAAACCTGGGAACTGTCTGCATCATAAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTTCATGTGCAGTCAAAACCTGGGAACTGTCTGCATCATAAAAAC  600

seq1  ATTTGGGTAATTTTCTGTTTATCAATGGATCAGTGACCTTTATTACCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGTAATTTTCTGTTTATCAATGGATCAGTGACCTTTATTACCCTT  650

seq1  ATAATCCATTCACTTTAATAATCTGTCACTGGTTTCTGCAAGTGTTGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCATTCACTTTAATAATCTGTCACTGGTTTCTGCAAGTGTTGCTA  700

seq1  CGCTGCGGTCTGTGGTGGTTTGAAAGAAAATGTCTTCTCTAGGCTCTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGCGGTCTGTGGTGGTTTGAAAGAAAATGTCTTCTCTAGGCTCTCTC  750

seq1  AGATGTTTGATTACTTGGTCCCCAGTTGGTGGCTTTGTTTGGGTTGGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTTGATTACTTGGTCCCCAGTTGGTGGCTTTGTTTGGGTTGGCTT  800

seq1  AGGAGGTGTGGCCTTGCTGGAAGATGTCTGTTACT-GGGGGGTGGGGGG  848
      ||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGGAGGTGTGGCCTTGCTGGAAGATGTCTGTTACTGGGGGGGTGGGGGG  849

seq1: chr1_77759403_77760322
seq2: B6Ng01-321M14.g_66_971 (reverse)

seq1  TTCCAAATCAATTGAACGTACTTTGCCCCGCTGCAGGAGTTCAGGAAAGT  50
      |||| |||| |||||||||||||   ||||||||| ||| ||| ||||||
seq2  TTCC-AATC-ATTGAACGTACTT--GCCCGCTGCA-GAG-TCA-GAAAGT  43

seq1  CAGACTGAGGAAGGGAAGGAAGTTACTAAAAAGGGGAAAACTGAAAAGAA  100
      |||||||||||  |||| ||||||||| ||||||||||||||| ||||||
seq2  CAGACTGAGGA--GGAA-GAAGTTACT-AAAAGGGGAAAACTG-AAAGAA  88

seq1  AAGGAAAGAAATTAA-CCAAAAAGGTGAAATGTTTAAGTGGTTCCATCCA  149
      |  | |||||||||| |||||||||||||||| |||||||||||||||||
seq2  A--GGAAGAAATTAACCCAAAAAGGTGAAATG-TTAAGTGGTTCCATCCA  135

seq1  TTTAGGGTGGATAGTACATCTCTGCTTCCAATTCTAAAGAGAAGCCAATA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGGTGGATAGTACATCTCTGCTTCCAATTCTAAAGAGAAGCCAATA  185

seq1  AAGTTGCTTTAAAGAGGAAAATTGTCCCAGTGAATAGTTCTAGCTTTCTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCTTTAAAGAGGAAAATTGTCCCAGTGAATAGTTCTAGCTTTCTA  235

seq1  ACTCTACCTGACACTTAGTGTCTGTATTTGATGAAGACCGGATGACTGCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTACCTGACACTTAGTGTCTGTATTTGATGAAGACCGGATGACTGCT  285

seq1  TCTGCTTGTGCAGCTGGAAAGGATTGGCCATGCAAGGAAAAAGATAATTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTGTGCAGCTGGAAAGGATTGGCCATGCAAGGAAAAAGATAATTT  335

seq1  TGGAGAAATACCACACTGGGAATAAACACTTTGGACTCTAGATAAAGTTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAATACCACACTGGGAATAAACACTTTGGACTCTAGATAAAGTTG  385

seq1  TCTGTTTCAATTTTCAGATTTCTAGCCATGTTTCTTGTTATAAAGACATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTCAATTTTCAGATTTCTAGCCATGTTTCTTGTTATAAAGACATA  435

seq1  GCTCACTGGGCTGGGGGTGGTGGTGGTCAGGTGTCTATGTCTATCTCTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTGGGCTGGGGGTGGTGGTGGTCAGGTGTCTATGTCTATCTCTCT  485

seq1  CTCTGTCTCTGTATTCCCCTCTCTCTCTCTCACACTCTCTCTCTCTCTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCTGTATTCCCCTCTCTCTCTCTCACACTCTCTCTCTCTCTCT  535

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGT  585

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAATTCATACGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAATTCATACGAA  635

seq1  TGGTACAAAGCAATCTGAGTGGGAAGTTTCTACCACCAGGAGATTCTGGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACAAAGCAATCTGAGTGGGAAGTTTCTACCACCAGGAGATTCTGGT  685

seq1  TAAAGGAAGATCCAGATAGATCTATGAGGCCCCTTTTCCTATCAGAAAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAAGATCCAGATAGATCTATGAGGCCCCTTTTCCTATCAGAAAGT  735

seq1  TTCTATCATCCCCTGCCACAACCAATAAAATCTAGTGGCCAATTTTCAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCATCCCCTGCCACAACCAATAAAATCTAGTGGCCAATTTTCAAA  785

seq1  CAACTGAGGAAGCCCAAGATATTTTTGCAGATTCTTTCTGCTTTCAAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGAGGAAGCCCAAGATATTTTTGCAGATTCTTTCTGCTTTCAAAAA  835

seq1  GACCTATGTAGAGCTAGAGAGGTGGATCAGTAGCTAAAAGTTGAGGGTGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTATGTAGAGCTAGAGAGGTGGATCAGTAGCTAAAAGTTGAGGGTGC  885

seq1  TCTTCCAAAGGACCTGAATTC  920
      |||||||||||||||||||||
seq2  TCTTCCAAAGGACCTGAATTC  906

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BAC

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Alignment Information