BAC Information

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BAC

Clone NameB6Ng01-322C05
Chromosome1 (Build37)
Map Location 111,720,564 - 111,721,732
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneEG666508, Cdh7, LOC100041429, EG626652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322C05.bB6Ng01-322C05.g
ACCGA111060GA111061
length1,0671,165
definitionB6Ng01-322C05.b B6Ng01-322C05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagagacttgacgttttatcatacagatctttcacttccttagtt
agagtcacaccaagatattttatgttatttgtgactatttggaagggtgt
tgtttccctaatttctttctcagcctgtttattctttgtgtagagaaagg
caattgacttgtttgagttaattttatatccagctacttcactgaaggtg
tttatcaggtttaggagttctctggtggaatttttagggtcacttatata
tactatcatatcatctgcaaaaagtgatattttgacttcctcttttccaa
tctttatccccttgatctccttttgttgttgctctggctaggacttcaag
tactatgttgaataggtagggagaaagtgggcagccttgcctagtccctg
attttagtggaattgcttcaagcctctcaccatttgctttgatgttggct
actggtttgctgtaggttgcttttatcatgtttaagtatgggccttgaat
tcttgatctttccaagacttttatcatgaatgggtgttggatcttgttga
atgctttttctgcatctaatgaaatgagcatgtggtttttgtctttgagt
ttgtttatataatggattacattgatggattttcgtatattaaaacatcc
cttcatccctggaataaaacctacttggtcaggatggatgattcctttaa
tgtgttcttggattcggttagtgagaattttattgagtatttttgcatcg
atattcataagggaaattggtctgaagttctctattcttgttagatcttt
ctgtggtttaggttatcagagtaattgtgtcttcatagaatgagttgggt
agagtttcctctatttctattttgtggaatagtttgtgcagaactggtat
tagatctctttgaaagttctggtagaactctgcacttaacccatctgggt
cctgggcttttttttggctgggagactattaatgactgcttctatttctt
ttaggggatattggaactggttagataggtttacttgatcctgatttaac
tttggtaactggatatc

gaattctcttcttacagttgcacatttatttgttctctcagcatctctct
ctccctctccctcaatccctcagttcatcctttcctccctcttttcttcc
tcccttcctaatactttcttcttaatttgatatgtgacacacacacacac
acacacacacacacacacacctttaattcttgagaattaaaataagtata
tggaatataaaatccttttatataatgtcttaaatttttagccctcataa
gaaataataatgagtttcagcaatgtcaaattaggacaaagaatctgaag
gatcattgagcacgggtagacaagcttgcagtgcataatttgccaaacaa
gctgagtcacttaattactggatcaatgcaaggttaattattcctatcaa
ctgtcacaattgttgaaggcttctgtgaggcaatattaacagaagactaa
tagtgcagagcttgagatggctatgatgtattccaaggcatgaaactagt
gtgagaggctttcttagggcacaggtaagtgctgacttactacagtagcc
tggccagctcagctgctctaaaactgaaatagtacatatcaaaaggtctg
agatttcacataatttatatttttttcacagtaccctgttagtggataaa
atgcaaacaactatcaatcaatataacatgataaattacttgaaattgca
tcttaatgaatctgaacatgttaaaaagaatttatgtattatcttttgaa
gtctttgaactacaaccctttaaaacactggttttcaattttcctaattc
tgtgaccctttaatacagtcttgttgggatgacctccaaccataaaaatt
actgttgtcactacttcatatatataattttgctactgttatgaatagta
gtataaatatttttgagatagaagtctgacaaaggggtcatgaccacagg
ttgaaagctgctgctttaaatacactaatatatgataacatactagaaga
aaaaacattttttattgtgaaatcaatatgatcagttcaaaatgagtaca
ttgttttacaagaaagaaataacgtacgattttaaatacattcaaacaag
gcaccaggttttatccgtaagggattagattaaattagagcctaatgtgt
ggacctggtccataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_111720564_111721732
seq2: B6Ng01-322C05.g_66_1230 (reverse)

seq1  TTATGGACTATGCTCACACAT--AGCTCAAATTTAAATCTTAATTCCCTT  48
      |||||||| | |  |||||||   |||| ||||| |||||  | ||||||
seq2  TTATGGACCAGGTCCACACATTAGGCTCTAATTT-AATCT--AATCCCTT  47

seq1  AC-GATAAAAACT-GTGCCTTTGTTTGAATGTATTTAAAATTCGTACGTT  96
      || ||||||| || ||||| |||||||||||||||||||| |||||||||
seq2  ACGGATAAAACCTGGTGCC-TTGTTTGAATGTATTTAAAA-TCGTACGTT  95

seq1  ATTTCTTTC-TGTAAAACAATGTACTTCATTTTGAACTGATCATATTGAT  145
      ||||||||| ||||||||||||||| ||||||||||||||||||||||||
seq2  ATTTCTTTCTTGTAAAACAATGTAC-TCATTTTGAACTGATCATATTGAT  144

seq1  TTTCCACAATAAAAATTGTTTTTTCTTCTAGTATGTTATCATATATTAGT  195
      ||  ||||||||||| ||||||||||||||||||||||||||||||||| 
seq2  TT--CACAATAAAAAATGTTTTTTCTTCTAGTATGTTATCATATATTAG-  191

seq1  TGTATTTAAAGCAGCAGCTTTCAACCTGTGGTCATGACCCCTTTGTCAGA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTAAAGCAGCAGCTTTCAACCTGTGGTCATGACCCCTTTGTCAGA  241

seq1  CTTCTATCTCAAAAATATTTATACTACTATTCATAACAGTAGCAAAATTA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATCTCAAAAATATTTATACTACTATTCATAACAGTAGCAAAATTA  291

seq1  TATATATGAAGTAGTGACAACAGTAATTTTTATGGTTGGAGGTCATCCCA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGAAGTAGTGACAACAGTAATTTTTATGGTTGGAGGTCATCCCA  341

seq1  ACAAGACTGTATTAAAGGGTCACAGAATTAGGAAAATTGAAAACCAGTGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGACTGTATTAAAGGGTCACAGAATTAGGAAAATTGAAAACCAGTGT  391

seq1  TTTAAAGGGTTGTAGTTCAAAGACTTCAAAAGATAATACATAAATTCTTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGGGTTGTAGTTCAAAGACTTCAAAAGATAATACATAAATTCTTT  441

seq1  TTAACATGTTCAGATTCATTAAGATGCAATTTCAAGTAATTTATCATGTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATGTTCAGATTCATTAAGATGCAATTTCAAGTAATTTATCATGTT  491

seq1  ATATTGATTGATAGTTGTTTGCATTTTATCCACTAACAGGGTACTGTGAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGATTGATAGTTGTTTGCATTTTATCCACTAACAGGGTACTGTGAA  541

seq1  AAAAATATAAATTATGTGAAATCTCAGACCTTTTGATATGTACTATTTCA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATAAATTATGTGAAATCTCAGACCTTTTGATATGTACTATTTCA  591

seq1  GTTTTAGAGCAGCTGAGCTGGCCAGGCTACTGTAGTAAGTCAGCACTTAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGAGCAGCTGAGCTGGCCAGGCTACTGTAGTAAGTCAGCACTTAC  641

seq1  CTGTGCCCTAAGAAAGCCTCTCACACTAGTTTCATGCCTTGGAATACATC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCCCTAAGAAAGCCTCTCACACTAGTTTCATGCCTTGGAATACATC  691

seq1  ATAGCCATCTCAAGCTCTGCACTATTAGTCTTCTGTTAATATTGCCTCAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCATCTCAAGCTCTGCACTATTAGTCTTCTGTTAATATTGCCTCAC  741

seq1  AGAAGCCTTCAACAATTGTGACAGTTGATAGGAATAATTAACCTTGCATT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCTTCAACAATTGTGACAGTTGATAGGAATAATTAACCTTGCATT  791

seq1  GATCCAGTAATTAAGTGACTCAGCTTGTTTGGCAAATTATGCACTGCAAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAGTAATTAAGTGACTCAGCTTGTTTGGCAAATTATGCACTGCAAG  841

seq1  CTTGTCTACCCGTGCTCAATGATCCTTCAGATTCTTTGTCCTAATTTGAC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTACCCGTGCTCAATGATCCTTCAGATTCTTTGTCCTAATTTGAC  891

seq1  ATTGCTGAAACTCATTATTATTTCTTATGAGGGCTAAAAATTTAAGACAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGAAACTCATTATTATTTCTTATGAGGGCTAAAAATTTAAGACAT  941

seq1  TATATAAAAGGATTTTATATTCCATATACTTATTTTAATTCTCAAGAATT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAAAGGATTTTATATTCCATATACTTATTTTAATTCTCAAGAATT  991

seq1  AAAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACATATCAAAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACATATCAAAT  1041

seq1  TAAGAAGAAAGTATTAGGAAGGGAGGAAGAAAAGAGGGAGGAAAGGATGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGAAAGTATTAGGAAGGGAGGAAGAAAAGAGGGAGGAAAGGATGA  1091

seq1  ACTGAGGGATTGAGGGAGAGGGAGAGAGAGATGCTGAGAGAACAAATAAA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGGATTGAGGGAGAGGGAGAGAGAGATGCTGAGAGAACAAATAAA  1141

seq1  TGTGCAACTGTAAGAAGAGAATTC  1169
      ||||||||||||||||||||||||
seq2  TGTGCAACTGTAAGAAGAGAATTC  1165


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