BAC Information

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BAC

Clone NameB6Ng01-322F22
Chromosome1 (Build37)
Map Location 48,571,413 - 48,572,550
singlet/doubletsinglet
Overlap geneLOC674566
Upstream geneLOC666869, LOC546734
Downstream geneLOC100041936, LOC666903, LOC666909, 2900045O20Rik, LOC666924, C230029F24Rik, LOC627430, LOC100041981
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322F22.bB6Ng01-322F22.g
ACCGA111227GA111228
length1,1291,093
definitionB6Ng01-322F22.b B6Ng01-322F22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacccagtagtagaactaccaaatgggacaatttttgactcctt
tcttagctcaaatagatatgagtattcaaaatgaaaacctttctataata
aaaataaatattttcttgttaataaagagtgtcccaagagatcctcttca
tttatgtaagcataaatcatcaagtttaatgctgcagttgcctgtggaga
taccagaaatttgcttttgtagtgctttgaatacaattgacccccacagg
cttatagggaatagaattattggaggtatggccctgttgtagtaggtgtg
accttgtgggaggaagtgtgtcacaggatgtggcctttgaggtttcagaa
gctcaagccagtctcactgtcacttgttctttggcttctggatgattcaa
atgtagaactctcagataattttctagcatcatgtctgattgcatgctac
cacactttctagaatgaaaataatgtactaaaactctataaatgtaaggc
agtcctaattaaatgtttttttataataattgctatgttcatggcattta
ttggcataaaaaataactaagactgattgctatgatagactctcccgaga
attcatagtagatctccccagtggcattgtataaaaaaaatatcaaggat
aatattctcaaaaaatctgtcttattccctttagaatttgattctaatca
gaagacctggcttatggtttatagagttcaataatgaatctttgaactaa
gtattctatacaataaccttcatctttggtttttctcaaataaaaccctt
gaaagaatgaatcaacttctgttaaaatatcagttatatgaattaccaaa
agggaatatgacttcaaaactggagtactctactagtggacttccactta
atacactgccttcgaggtttcacaaacatcatggccatgatgtctggccc
tccacttgtcattttcggtgttaagtcagtggttttcaactgtgataccc
tttaatacatgtccttatattgttgtaatcccacataaaattatttttct
gctactttatatgtagtttataacagttttgatttgcaatataaatatct
gtgtttttcaatgtttagcgatccgtgaa

gaattcaaaatgatggttcctcagaaaactgagaattgattagctcaagc
atcagcgatactactcctgtcatatacccagagaacactccatccttctt
gcatatccatactatatgtaattcatactagccagaaattggaaacaacc
tagatctctcacaactgaagaataaatttaaaaaaacaaacgtgttacat
ttacacatggagtattactcagatatttttcttttttttaaaaaaaatgg
aatagtgatatttgcagacaagtagatgaaacgagaaaagatcatcccga
gtaaggtaaacctgaccaatagaactaacagaagtagacattacctttta
agtaaaggatagctatgactcagaaagactaaattacaaagaaaactcaa
gttagaattcatggatctccagggaaatggaaatagaatagatttttcag
gaggagtgagagtagatgggatggaaaaagaagacatcttgacagggaag
gaatggaggagaaagtactgagagagaggactggaattagagctcatttg
tgagacaatgtggaaacataattcaatgaaaactccctggaatctatgag
gttggctggtcaagattcttagtaatggggcatattaatcgtgagccagc
catttagtgtaacaaggcaaggtttctagtggagggactgtaatatcaac
ttagtcacaaaaacttagacttacaaatttgttctgtgtgcggttaaagt
ggcactgaacttgtgacagtgactaatgaatgactagtcaatcttgaggt
ccatgctaaaagaaggaaatcaatcctgatagttcctggatggccaggaa
atcagggactgaatggccaaggacctagaatagaaagaaaaatgactggc
aaaaaagtaatgaagtgattcttaaagacattctgctattctcagattag
ttgttgggcttagattttttcacacctactttaataaggttctcaaacac
ctcgatcccccttctatcccacatccaaaagtagaagttagatggtaata
gacaaagggatgaagctctgtttatgtgggggttttttttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_48571413_48572550
seq2: B6Ng01-322F22.b_46_1174

seq1  GAATTCAACCCAGTAGTAGAACTACCAAATGGGACAATTTTTGACTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCCAGTAGTAGAACTACCAAATGGGACAATTTTTGACTCCTT  50

seq1  TCTTAGCTCAAATAGATATGAGTATTCAAAATGAAAACCTTTCTATAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGCTCAAATAGATATGAGTATTCAAAATGAAAACCTTTCTATAATA  100

seq1  AAAATAAATATTTTCTTGTTAATAAAGAGTGTCCCAAGAGATCCTCTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATATTTTCTTGTTAATAAAGAGTGTCCCAAGAGATCCTCTTCA  150

seq1  TTTATGTAAGCATAAATCATCAAGTTTAATGCTGCAGTTGCCTGTGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTAAGCATAAATCATCAAGTTTAATGCTGCAGTTGCCTGTGGAGA  200

seq1  TACCAGAAATTTGCTTTTGTAGTGCTTTGAATACAATTGACCCCCACAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGAAATTTGCTTTTGTAGTGCTTTGAATACAATTGACCCCCACAGG  250

seq1  CTTATAGGGAATAGAATTATTGGAGGTATGGCCCTGTTGTAGTAGGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGGGAATAGAATTATTGGAGGTATGGCCCTGTTGTAGTAGGTGTG  300

seq1  ACCTTGTGGGAGGAAGTGTGTCACAGGATGTGGCCTTTGAGGTTTCAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGTGGGAGGAAGTGTGTCACAGGATGTGGCCTTTGAGGTTTCAGAA  350

seq1  GCTCAAGCCAGTCTCACTGTCACTTGTTCTTTGGCTTCTGGATGATTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAGCCAGTCTCACTGTCACTTGTTCTTTGGCTTCTGGATGATTCAA  400

seq1  ATGTAGAACTCTCAGATAATTTTCTAGCATCATGTCTGATTGCATGCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGAACTCTCAGATAATTTTCTAGCATCATGTCTGATTGCATGCTAC  450

seq1  CACACTTTCTAGAATGAAAATAATGTACTAAAACTCTATAAATGTAAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTTCTAGAATGAAAATAATGTACTAAAACTCTATAAATGTAAGGC  500

seq1  AGTCCTAATTAAATGTTTTTTTATAATAATTGCTATGTTCATGGCATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTAATTAAATGTTTTTTTATAATAATTGCTATGTTCATGGCATTTA  550

seq1  TTGGCATAAAAAATAACTAAGACTGATTGCTATGATAGACTCTCCCGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATAAAAAATAACTAAGACTGATTGCTATGATAGACTCTCCCGAGA  600

seq1  ATTCATAGTAGATCTCCCCAGTGGCATTGTATAAAAAAAATATCAAGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAGTAGATCTCCCCAGTGGCATTGTATAAAAAAAATATCAAGGAT  650

seq1  AATATTCTCAAAAAATCTGTCTTATTCCCTTTAGAATTTGATTCTAATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTCAAAAAATCTGTCTTATTCCCTTTAGAATTTGATTCTAATCA  700

seq1  GAAGACCTGGCTTATGGTTTATAGAGTTCAATAATGAATCTTTGAACTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCTGGCTTATGGTTTATAGAGTTCAATAATGAATCTTTGAACTAA  750

seq1  GTATTCTATACAATAACCTTCATCTTTGGTTTTTCTCAAATAAAACCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTATACAATAACCTTCATCTTTGGTTTTTCTCAAATAAAACCCTT  800

seq1  GAAAGAATGAATCAACTTCTGTTAAAATATCAGTTATATGAATTACCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATGAATCAACTTCTGTTAAAATATCAGTTATATGAATTACCAAA  850

seq1  AGGGAATATGACTTCAAAACTGGAGTACTCTACTAGTGGACTTCCACTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATATGACTTCAAAACTGGAGTACTCTACTAGTGGACTTCCACTTA  900

seq1  ATACACTGCCTTCGAGGTTTCACAAACATCATGGCCATGATGTCTGG-CC  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATACACTGCCTTCGAGGTTTCACAAACATCATGGCCATGATGTCTGGCCC  950

seq1  TCCACTTGTCATTTTCGGTGTTAAGTCAGTGGTTTTCAACTGTGATACCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTGTCATTTTCGGTGTTAAGTCAGTGGTTTTCAACTGTGATACCC  1000

seq1  TTTAATACATGTCCTTATATTGTTGTAATCCCCAACATAAAAATTATTTT  1049
      ||||||||||||||||||||||||||||||||  |||| |||||||||||
seq2  TTTAATACATGTCCTTATATTGTTGTAATCCC--ACAT-AAAATTATTTT  1047

seq1  TCTGCTACTTTATAATTGTAGTTTTATACAGTTTTGAATTGCAATATAAA  1099
      ||||||||||||||  ||||||||   |||||||||| ||||||||||||
seq2  TCTGCTACTTTATA--TGTAGTTTATAACAGTTTTGATTTGCAATATAAA  1095

seq1  TATCTGTGTTTTTCAAAGGTTTTAGGCGATCCCCGTGAA  1138
      |||||||||||||||| |  |||| |||||  |||||||
seq2  TATCTGTGTTTTTCAATG--TTTA-GCGAT--CCGTGAA  1129


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