BAC Information

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BAC

Clone NameB6Ng01-322G12
Chromosome1 (Build37)16 (Build37)
Map Location 63,183,657 - 63,183,9918,710,750 - 8,711,843
singlet/doubletsingletsinglet
Overlap genenone
Upstream genePard3b, LOC667592, Nrp2, LOC100043070, A430093A21Rik
Downstream geneNdufs1, Eef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik, LOC667644, LOC100042638, Adam23, Gm215, Mdh1b, Fastkd2, 4933402D24Rik, LOC671842, OTTMUSG00000013918, Klf7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322G12.bB6Ng01-322G12.g
ACCGA111254GA111255
length8291,091
definitionB6Ng01-322G12.b B6Ng01-322G12.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(63,183,657 - 63,183,991)(8,710,750 - 8,711,843)
sequence
gaattcataaatatcttttttaaaagaagagaggagcttgtcacggtggc
acatgcctattacttgggaggctgagacaagacaaccataagtttgaaac
caccttgagcttcaaaatgagactctgtcctaaacaaataaataaatagg
actagagagagagttcagtcaataaagtgtttgccttacaagcctgtggc
ttggccccttgaaaccacatttaaacagctcggcaggggttggggagatg
gttcagtggttaagagtggttgctgcatagccgggcgtggtggcgcacgc
ctttaaccccagcactcgggaggcagagagaggcgcatttctgagttcga
ggccaacctggtctacaaagtgagttccaggacagccagagctacacaga
gaaaccctgtctcgaaaaaaaaaaaaaaaaaaagagtggttgctgctctt
ccagaggaatgtcattaggaaaacattgctttcaggttggatttaaggcc
tgttctataggtgggaactcattgatgatactgtaaactttcccacaaac
ctgtggttgggaggtttgagaagctaggggaaaacccactgctgctcttt
taccaagtgtctacagtagcaagctgacttctaaatagtatctttatacc
catccataggttagagcggctcttagccttcagagacttttttgtgcagc
agacagcaactagtgtagagactcccaactcaccaaagtatgagaatagt
gactctggagtgctccgacctatataagacacacacaacacatgtgcgtg
tacacacgacacacacacacacacacaca
gaattcaaggctatcctagtatcaaagcaagacccttcccttcccccttc
aatccataaatgaggaaggatgcacctctgggttctaacaatgcagtgtt
tccagcagagcttgcacctgtgccgacaggctggctcccaggacacctgc
cctatgtatcaggagatcaggcacagaagatgtcctgccagtaagaacac
cagagggcaggtccatgacttccatctatgcagtccagtctgggccaatc
aatttactaccagagacaagaagaaccttaatctatatgtggtccttcac
tacagataaagttgatttcacacctttctggaggggaagaaacaatgctg
aggctttaagcccatcccgtgggcttgtactgggcaactgtttaccgctg
caccactcgcaagcttaggttggcacttctcaaacattaaaagagacgga
aataaattgtgttcttcctgggagtatttacagaacaaccaaagctgcta
tctcctggtgaacactttcctctgggttcccaaacaccagaatcagggag
tgtcatggggcctaagcacaatgttaggctccttggtacagcccacacac
accctctcccaactgtcacactaagaggagtttactactgacagtgagga
tgtgtactgaaaggagaaccacacacttctgagattaaaccaaaggggta
aagttcgaaagactcatataccatgaaacctctttcgtgtaattggaagg
acctccaaaatgtctttgtttcccagttactgagacagggtctcatttaa
tccaggctggccttgaactgaacctcctgcctccatttcccaaatactgg
tattaagacactttaaaaaataaaactccttttgaaaagcatgaccaaaa
ctttcccccataactagggccaatccgagttttaaacacctcactaacat
ctgtgaggtgtgctttccagctagcccataggcacgagccttcagaggaa
agagggctagctgtgtaagcttctgacagtcaccacttaagcactgctct
gggacaagggggacagttcaatcgactgcagagtcgaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_63183657_63183991
seq2: B6Ng01-322G12.b_291_490

seq1  GAGATGCCTCAGGGGTTAAGAGTGGTTGCT-CTTCGCTGGGCGTGGTGGC  49
      ||||||  |||| ||||||||||||||||| | | || ||||||||||||
seq2  GAGATGGTTCAGTGGTTAAGAGTGGTTGCTGCATAGCCGGGCGTGGTGGC  50

seq1  GCACGCCTTTAATTCCAGCACTAGGGAGGGAGAGGCAGGCAGATTTCTGA  99
      ||||||||||||  |||||||| |||||| ||||  ||||  ||||||||
seq2  GCACGCCTTTAACCCCAGCACTCGGGAGGCAGAGAGAGGCGCATTTCTGA  100

seq1  GTTAGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAACCAGGGCTA  149
      ||| ||||||| |||||||||||||||||||||||||||| |||| ||||
seq2  GTTCGAGGCCAACCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGAGCTA  150

seq1  TACAGAGAAACCCTGTCTCGAAAAACAAAAACAAAAACAAACAAACAAAA  199
       |||||||||||||||||||||||              ||| ||| ||||
seq2  CACAGAGAAACCCTGTCTCGAAAA--------------AAAAAAAAAAAA  186

seq1  AAAGAATGGTTGCTCTTCAATAACAGTTTTTTAAATGTTTGTGGGTAAGC  249
      ||||| ||||||||                                    
seq2  AAAGAGTGGTTGCT------------------------------------  200

seq1  AGGCAGAAATGTGGCCCTCTGTCCCACCCAATAAGCTGTGAAATTTGAAA  299
                                                        
seq2  --------------------------------------------------  200

seq1  AAAAGAAAAAAAAAAAAAGTGGTAAGAGTGGTTGCT  335
                                          
seq2  ------------------------------------  200

seq1: chr16_8710750_8711843
seq2: B6Ng01-322G12.g_67_1157

seq1  GAATTCAAGGCTATCCTAGTATCAAAGCAAGACCCTTCCCTTCCCCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCTATCCTAGTATCAAAGCAAGACCCTTCCCTTCCCCCTTC  50

seq1  AATCCATAAATGAGGAAGGATGCACCTCTGGGTTCTAACAATGCAGTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATAAATGAGGAAGGATGCACCTCTGGGTTCTAACAATGCAGTGTT  100

seq1  TCCAGCAGAGCTTGCACCTGTGCCGACAGGCTGGCTCCCAGGACACCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCAGAGCTTGCACCTGTGCCGACAGGCTGGCTCCCAGGACACCTGC  150

seq1  CCTATGTATCAGGAGATCAGGCACAGAAGATGTCCTGCCAGTAAGAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGTATCAGGAGATCAGGCACAGAAGATGTCCTGCCAGTAAGAACAC  200

seq1  CAGAGGGCAGGTCCATGACTTCCATCTATGCAGTCCAGTCTGGGCCAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGCAGGTCCATGACTTCCATCTATGCAGTCCAGTCTGGGCCAATC  250

seq1  AATTTACTACCAGAGACAAGAAGAACCTTAATCTATATGTGGTCCTTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACTACCAGAGACAAGAAGAACCTTAATCTATATGTGGTCCTTCAC  300

seq1  TACAGATAAAGTTGATTTCACACCTTTCTGGAGGGGAAGAAACAATGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATAAAGTTGATTTCACACCTTTCTGGAGGGGAAGAAACAATGCTG  350

seq1  AGGCTTTAAGCCCATCCCGTGGGCTTGTACTGGGCAACTGTTTACCGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTAAGCCCATCCCGTGGGCTTGTACTGGGCAACTGTTTACCGCTG  400

seq1  CACCACTCGCAAGCTTAGGTTGGCACTTCTCAAACATTAAAAGAGACGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTCGCAAGCTTAGGTTGGCACTTCTCAAACATTAAAAGAGACGGA  450

seq1  AATAAATTGTGTTCTTCCTGGGAGTATTTACAGAACAACCAAAGCTGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTGTGTTCTTCCTGGGAGTATTTACAGAACAACCAAAGCTGCTA  500

seq1  TCTCCTGGTGAACACTTTCCTCTGGGTTCCCAAACACCAGAATCAGGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGGTGAACACTTTCCTCTGGGTTCCCAAACACCAGAATCAGGGAG  550

seq1  TGTCATGGGGCCTAAGCACAATGTTAGGCTCCTTGGTACAGCCCACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGGGGCCTAAGCACAATGTTAGGCTCCTTGGTACAGCCCACACAC  600

seq1  ACCCTCTCCCAACTGTCACACTAAGAGGAGTTTACTACTGACAGTGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTCCCAACTGTCACACTAAGAGGAGTTTACTACTGACAGTGAGGA  650

seq1  TGTGTACTGAAAGGAGAACCACACACTTCTGAGATTAAACCAAAGGGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACTGAAAGGAGAACCACACACTTCTGAGATTAAACCAAAGGGGTA  700

seq1  AAGTTCGAAAGACTCATATACCATGAAACCTCTTTCGTGTAATTGGAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCGAAAGACTCATATACCATGAAACCTCTTTCGTGTAATTGGAAGG  750

seq1  ACCTCCAAAATGTCTTTGTTTCCCAGTTACTGAGACAGGGTCTCATTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCAAAATGTCTTTGTTTCCCAGTTACTGAGACAGGGTCTCATTTAA  800

seq1  TCCAGGCTGGCCTTGAACTGAACCTCCTGCCTCCATTTCCCAAATACTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGCTGGCCTTGAACTGAACCTCCTGCCTCCATTTCCCAAATACTGG  850

seq1  TATTAAGACACTTTAAAAAATAAAACTCCTTTTGAAAAGCATGACCAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGACACTTTAAAAAATAAAACTCCTTTTGAAAAGCATGACCAAAA  900

seq1  CTTTCCCCCATAACTAGGCCAAATCCGAGTTTTAAACACCTCACTAACAT  950
      |||||||||||||||||| | |||||||||||||||||||||||||||||
seq2  CTTTCCCCCATAACTAGGGCCAATCCGAGTTTTAAACACCTCACTAACAT  950

seq1  CTGTGAGGTGTGCTTTCCAGCTAGCCCATAGGCACGAGCCTTCAGAGGAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTGTGAGGTGTGCTTTCCAGCTAGCCCATAGGCACGAGCCTTCAGAGGAA  1000

seq1  AGAGGGCTAGCTGTGTAAGCTTCTGACAGTCA-CACTTAAGGCACCTGCT  1049
      |||||||||||||||||||||||||||||||| ||||||| ||| |||| 
seq2  AGAGGGCTAGCTGTGTAAGCTTCTGACAGTCACCACTTAA-GCA-CTGC-  1047

seq1  TCTGGGGACAA-GGGGACAGTTC-ATCGACTGGCAGAGTCCAAATGG  1094
      ||| ||||||| ||||||||||| ||||||| ||||||| | |||||
seq2  TCT-GGGACAAGGGGGACAGTTCAATCGACT-GCAGAGT-CGAATGG  1091