BAC Information

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BAC

Clone NameB6Ng01-322K13
Chromosome1 (Build37)
Map Location 80,341,765 - 80,491,732
singlet/doubletdoublet
Overlap geneEG620899, 1700016L21Rik
Upstream geneScg2, Ap1s3, Wdfy1, Mrpl44, Serpine2, EG433326, LOC665064, LOC100039325, A830043J08Rik, 2310015K22Rik, Cul3
Downstream geneDock10, LOC665092, 9430031J16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322K13.bB6Ng01-322K13.g
ACCGA111445GA111446
length4681,120
definitionB6Ng01-322K13.b B6Ng01-322K13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,491,257 - 80,491,732)(80,341,765 - 80,342,883)
sequence
agaagagagcaagagagtatacacgggaggggtcggagggaggaaaggga
agggggaaatgatattatattttcatttcaaataaaaataaaacttttaa
ggttggattttcaaatcaagttgttaatataataacaacttgaatttgaa
acataaacttgaactgtaggttgcaaggccaccataggatttattgattt
ttccccactctgaccgaatgtggatctccttttagacctttcagcgaata
gataataaaaaaaaaaaaatagagagtacttttgactaagtgcaattcag
ggctctcctctgcaggtcttataaatagctcttactggagtgactaacaa
caatcccaatcgttcacacaagtatccttgagtcatgcaaggttgtgaca
ggaggaagccttgcatcggcttaaccagtcctatctcctaacagatttgg
cggatgcttgggatgtct
gaattctcatgagaagtgcctaccctacgtaaaccttcaggtttcttaga
acagctactacagatccttgaatttttaaggttaaattaattatgacagt
gaagaaagtagtgtttgttcttggggagaaagcatgcttcttattagctt
cctaatcttttgttttaaggggaatttctgactggaggtggtcttagtgg
ataagcagttgtcactttcaaccatgttagccaaagtggcttgactgatc
cttcagtgtgaggatgtgcacaggtgatatagataagcagatccactgga
aaacctttgagtggatgactgaaggacacaaggtagtagaacaatcaggg
acattggcagtaaataacctaggctctgcatgctggttgactttcactgt
cattttctcctcaacttctgggttctcataattgtacagcaagtgctctt
acctaatgagccacctctccagcaccctgaagcaattctcatctctagta
tgaagaagatagctcatcttataattgggcccagaccaacttatcttcct
tccttccttccttccttccttccttccttccttccttccttttgtttgag
caacttactcaacactgttttggatgaatttacacagctgccactatagt
agtgacatatagaagtagtatggagaattaaccagccaactgtcctatat
atcaataatggatgtttctgtgaacacagagaaaattagcaattattata
tgattatctgacagcaagagtagatgagtaaccagattaaatacattaaa
tgagatgattggtaactatgaatattgtccatagtatatctgaatcagct
aaattgccttctataacaagacagaaaacccaactctataagaacaatca
gatcattatcttacataacaggaagcctagagtcagcttccatccagata
cagtatgtttaggttctagccaagtttttgacagttttgggagccctaca
cttctccactgactagtggcaagcatctgtagcacaatatgttatcattg
tctcattaccttgagcttatagcagtgattctcaaaccctgtgtggtcat
ggatggctttgaggttgcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_80491257_80491732
seq2: B6Ng01-322K13.b_45_518 (reverse)

seq1  AGACATCCCAGGCATCCGTGAAATCTGTTAGGAGATGGAACTGGTTAAGA  50
      |||||||||| |||||||  |||||||||||||||| | |||||||||| 
seq2  AGACATCCCAAGCATCCGCCAAATCTGTTAGGAGATAGGACTGGTTAAGC  50

seq1  CGATGCAAGGCTTCCACCTGTAACAACCTTGCATTACTCAAGGATACTTG  100
      ||||||||||||||| ||||| |||||||||||| |||||||||||||||
seq2  CGATGCAAGGCTTCCTCCTGTCACAACCTTGCATGACTCAAGGATACTTG  100

seq1  TGAGAAAGAGTGGGAGTGTTGTCTGTCACTCCAGACAAGAGCTATTTCTA  150
      || ||| || ||||| ||||||  ||||||||||  ||||||||||| ||
seq2  TGTGAACGATTGGGATTGTTGTTAGTCACTCCAG-TAAGAGCTATTTATA  149

seq1  AGACCTGCAGAGGAGAGCCCTGAATTGCACTTAGTCAAAAGTACTCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGACCTGCAGAGGAGAGCCCTGAATTGCACTTAGTCAAAAGTACTCTCTA  199

seq1  TTTTTTTTTTTTTTTTAACTATTCGCTGAAAGGACTAAAAGGAGATGCAC  250
      ||||||||||||| ||| ||||||||||||||| |||||||||||| |||
seq2  TTTTTTTTTTTTTATTATCTATTCGCTGAAAGGTCTAAAAGGAGATCCAC  249

seq1  ATTTGGTCAGAGTGGGAAAAAAATCAATAATAACTATGGCAGCCTTGAAA  300
      ||| ||||||||||||  ||||||||||||   ||||||  |||||| ||
seq2  ATTCGGTCAGAGTGGG-GAAAAATCAATAAATCCTATGGTGGCCTTGCAA  298

seq1  CCTATTGTTCAAGTTTAAGTTTCAAATTTAAGTTGTTATTATATTAACAA  350
      ||||  ||||||||||| |||||||||| |||||||||||||||||||||
seq2  CCTACAGTTCAAGTTTATGTTTCAAATTCAAGTTGTTATTATATTAACAA  348

seq1  CTTGATTTGAAAATCCAACCTTAAAAGTTTTATTTTTATTTGAAATGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTTGAAAATCCAACCTTAAAAGTTTTATTTTTATTTGAAATGAAA  398

seq1  ATATAATATCATTTCCCCCTTCCCTTTCCTCCCTCCGACCCCTCCCGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATATCATTTCCCCCTTCCCTTTCCTCCCTCCGACCCCTCCCGTGT  448

seq1  ATACTCTCTTGCTCTCTTCTGAATTC  476
      ||||||||||||||||||||||||||
seq2  ATACTCTCTTGCTCTCTTCTGAATTC  474

seq1: chr1_80341765_80342883
seq2: B6Ng01-322K13.g_68_1187

seq1  GAATTCTCATGAGAAGTGCCTACCCTACGTAAACCTTCAGGTTTCTTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGAGAAGTGCCTACCCTACGTAAACCTTCAGGTTTCTTAGA  50

seq1  ACAGCTACTACAGATCCTTGAATTTTTAAGGTTAAATTAATTATGACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTACTACAGATCCTTGAATTTTTAAGGTTAAATTAATTATGACAGT  100

seq1  GAAGAAAGTAGTGTTTGTTCTTGGGGAGAAAGCATGCTTCTTATTAGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGTAGTGTTTGTTCTTGGGGAGAAAGCATGCTTCTTATTAGCTT  150

seq1  CCTAATCTTTTGTTTTAAGGGGAATTTCTGACTGGAGGTGGTCTTAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATCTTTTGTTTTAAGGGGAATTTCTGACTGGAGGTGGTCTTAGTGG  200

seq1  ATAAGCAGTTGTCACTTTCAACCATGTTAGCCAAAGTGGCTTGACTGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAGTTGTCACTTTCAACCATGTTAGCCAAAGTGGCTTGACTGATC  250

seq1  CTTCAGTGTGAGGATGTGCACAGGTGATATAGATAAGCAGATCCACTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTGTGAGGATGTGCACAGGTGATATAGATAAGCAGATCCACTGGA  300

seq1  AAACCTTTGAGTGGATGACTGAAGGACACAAGGTAGTAGAACAATCAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTTGAGTGGATGACTGAAGGACACAAGGTAGTAGAACAATCAGGG  350

seq1  ACATTGGCAGTAAATAACCTAGGCTCTGCATGCTGGTTGACTTTCACTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGCAGTAAATAACCTAGGCTCTGCATGCTGGTTGACTTTCACTGT  400

seq1  CATTTTCTCCTCAACTTCTGGGTTCTCATAATTGTACAGCAAGTGCTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTCCTCAACTTCTGGGTTCTCATAATTGTACAGCAAGTGCTCTT  450

seq1  ACCTAATGAGCCACCTCTCCAGCACCCTGAAGCAATTCTCATCTCTAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATGAGCCACCTCTCCAGCACCCTGAAGCAATTCTCATCTCTAGTA  500

seq1  TGAAGAAGATAGCTCATCTTATAATTGGGCCCAGACCAACTTATCTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAGATAGCTCATCTTATAATTGGGCCCAGACCAACTTATCTTCCT  550

seq1  TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTTGTTTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTTGTTTGAG  600

seq1  CAACTTACTCAACACTGTTTTGGATGAATTTACACAGCTGCCACTATAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTACTCAACACTGTTTTGGATGAATTTACACAGCTGCCACTATAGT  650

seq1  AGTGACATATAGAAGTAGTATGGAGAATTAACCAGCCAACTGTCCTATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACATATAGAAGTAGTATGGAGAATTAACCAGCCAACTGTCCTATAT  700

seq1  ATCAATAATGGATGTTTCTGTGAACACAGAGAAAATTAGCAATTATTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAATGGATGTTTCTGTGAACACAGAGAAAATTAGCAATTATTATA  750

seq1  TGATTATCTGACAGCAAGAGTAGATGAGTAACCAGATTAAATACATTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATCTGACAGCAAGAGTAGATGAGTAACCAGATTAAATACATTAAA  800

seq1  TGAGATGATTGGTAACTATGAATATTGTCCATAGTATATCTGAATCAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGATTGGTAACTATGAATATTGTCCATAGTATATCTGAATCAGCT  850

seq1  AAATTGCCTTCTATAACAAGACAGAAAACCCAACTCTATAAGAACAATCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCCTTCTATAACAAGACAGAAAACCCAACTCTATAAGAACAATCA  900

seq1  GATCATTATCTTACATAACAGGAAGCCTAGAGTCAGCTTCCCATCCAGAT  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GATCATTATCTTACATAACAGGAAGCCTAGAGTCAGCTT-CCATCCAGAT  949

seq1  ACAGTATGTTTAGGTTCTAGCCCAAGTTTTTGACAGTTTTGGGAGCCCTA  1000
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACAGTATGTTTAGGTTCTAG-CCAAGTTTTTGACAGTTTTGGGAGCCCTA  998

seq1  CACTCCTCCACTGGCTAGTGGCAAGGCATCTGTAGCCACAATATG-TATC  1049
      |||| |||||||| |||||||||| |||||||||| ||||||||| ||||
seq2  CACTTCTCCACTGACTAGTGGCAA-GCATCTGTAG-CACAATATGTTATC  1046

seq1  ATTGTCTCATTTACTTGAAGCTATAGCAGTGATTCTCAAA-CCTGTG-GG  1097
      |||||||||||  |||||   ||||||||||||||||||| |||||| ||
seq2  ATTGTCTCATTACCTTGAGCTTATAGCAGTGATTCTCAAACCCTGTGTGG  1096

seq1  TCAT-GAT-GCTTTGAGGTTGCAT  1119
      |||| ||| |||||||||||||||
seq2  TCATGGATGGCTTTGAGGTTGCAT  1120