BAC Information

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BAC

Clone NameB6Ng01-322M08
Chromosome1 (Build37)
Map Location 100,221,515 - 100,222,626
singlet/doubletsinglet
Overlap genenone
Upstream geneEG634346, D1Ertd622e, Hisppd1, Zh2c2, Pam, LOC100041823, LOC666153, LOC100040887
Downstream geneSlco6d1, LOC100041868, EG666182
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322M08.bB6Ng01-322M08.g
ACCGA111528GA111529
length1,1161,107
definitionB6Ng01-322M08.b B6Ng01-322M08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatccaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcattcctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgatcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtactttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtctctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggtttaatttcttt
gaatagttcttcttgtttcccctttggttgatttcacccctgagttgatt
attttcctgccgtctactcctcttgggtgaatttgcttcctttttttcta
gagcttttagatgtgttgtcaagctgctagtatgtgcttctcctcccgtt
tcttattggaggcactcagagctatgagtttccctttagaaatgccttta
tgtgtccaaggtttcggtacgttggtggcttcattttcattaaactctaa
aatagtcttatttcgttctttatctctgaccaaggatatcatgtacaaaa
gaagtggctggttcta

gaattccaacctcatgttagactttcttcaatgactttcactctgtgcaa
gcaaaggtagatattttacttctgctagagtttgataagatggatatttt
cactaaggtagaagacttaggtggtaatttcccaatttttctgtcgcaaa
ggaagcattcatcttttcaaaggcccttgaagttgtcagatatagatgat
tttcatctctgaactccatagctatgatgtgtcattgttgagaaaaaatg
aactagaaataactgcttctatagacaaaatattcagtggttcagaaaag
cagttccctaatctcctatctttgtctgtctcttcaggagtaatttgtga
tagaagggatatgaaagaaaagtaatattaaggcagcagggagaagggag
tgagaatttggggacattcataatagaatagagaatctgagacagtagct
tgagctttcaaaggagcctggagtggaaggtagatgtatcattatgtcca
ggagagtgaagctaaatactctcatcagtgattttttttctttctttcac
aaattgctatacaaagttccttcactccttgccttgcataacattgatga
ttactaggtcatttaagggaggaaatgcaccctaataatgatcttcaacg
aataaaatcacatccctttctgggtaaacaactttagagttaaacaatgc
ttgcttaatgcttgctttaaatagcaattatatatgcatatatatatata
tataatctgatagaaaattgaatcccatgcccctttgttccatgtttcat
aggtggaatgttgttgatctcagttctcagtattataaaattccttgtgt
gtggcccctggcaccagcaccaaaattgtaattactattgaatgtcaata
ggagatttagatgccgctagtccttttccctactctggattgttcaggta
atcatttggttgacagccacatgaaataggatgacttaaatttatgcaaa
tatagtaacaacaaattaatgagttatcccaggttctcttcacataataa
atctacacttttcttatctgtataaatatcctgtccatattttgttacag
cattatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_100221515_100222626
seq2: B6Ng01-322M08.g_66_1172

seq1  GAATTCCAACCTCATGTTAGACTTTCTTCAATGACTTTCACTCTGTGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACCTCATGTTAGACTTTCTTCAATGACTTTCACTCTGTGCAA  50

seq1  GCAAAGGTAGATATTTTACTTCTGCTAGAGTTTGATAAGATGGATATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGTAGATATTTTACTTCTGCTAGAGTTTGATAAGATGGATATTTT  100

seq1  CACTAAGGTAGAAGACTTAGGTGGTAATTTCCCAATTTTTCTGTCGCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGGTAGAAGACTTAGGTGGTAATTTCCCAATTTTTCTGTCGCAAA  150

seq1  GGAAGCATTCATCTTTTCAAAGGCCCTTGAAGTTGTCAGATATAGATGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCATTCATCTTTTCAAAGGCCCTTGAAGTTGTCAGATATAGATGAT  200

seq1  TTTCATCTCTGAACTCCATAGCTATGATGTGTCATTGTTGAGAAAAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCTCTGAACTCCATAGCTATGATGTGTCATTGTTGAGAAAAAATG  250

seq1  AACTAGAAATAACTGCTTCTATAGACAAAATATTCAGTGGTTCAGAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGAAATAACTGCTTCTATAGACAAAATATTCAGTGGTTCAGAAAAG  300

seq1  CAGTTCCCTAATCTCCTATCTTTGTCTGTCTCTTCAGGAGTAATTTGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCCTAATCTCCTATCTTTGTCTGTCTCTTCAGGAGTAATTTGTGA  350

seq1  TAGAAGGGATATGAAAGAAAAGTAATATTAAGGCAGCAGGGAGAAGGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGGATATGAAAGAAAAGTAATATTAAGGCAGCAGGGAGAAGGGAG  400

seq1  TGAGAATTTGGGGACATTCATAATAGAATAGAGAATCTGAGACAGTAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATTTGGGGACATTCATAATAGAATAGAGAATCTGAGACAGTAGCT  450

seq1  TGAGCTTTCAAAGGAGCCTGGAGTGGAAGGTAGATGTATCATTATGTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTTCAAAGGAGCCTGGAGTGGAAGGTAGATGTATCATTATGTCCA  500

seq1  GGAGAGTGAAGCTAAATACTCTCATCAGTGATTTTTTTTCTTTCTTTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTGAAGCTAAATACTCTCATCAGTGATTTTTTTTCTTTCTTTCAC  550

seq1  AAATTGCTATACAAAGTTCCTTCACTCCTTGCCTTGCATAACATTGATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCTATACAAAGTTCCTTCACTCCTTGCCTTGCATAACATTGATGA  600

seq1  TTACTAGGTCATTTAAGGGAGGAAATGCACCCTAATAATGATCTTCAACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGGTCATTTAAGGGAGGAAATGCACCCTAATAATGATCTTCAACG  650

seq1  AATAAAATCACATCCCTTTCTGGGTAAACAACTTTAGAGTTAAACAATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATCACATCCCTTTCTGGGTAAACAACTTTAGAGTTAAACAATGC  700

seq1  TTGCTTAATGCTTGCTTTAAATAGCAATTATATATGCATATATATATATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTAATGCTTGCTTTAAATAGCAATTATATATGCATATATATATATA  750

seq1  TATAATCTGATAGAAAATTGAATCCCATGCCCCTTTGTTCCATGTTTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCTGATAGAAAATTGAATCCCATGCCCCTTTGTTCCATGTTTCAT  800

seq1  AGGTGGAATGTTGTTGATCTCAGTTCTCAGTATTATAAAATTCCTTGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGAATGTTGTTGATCTCAGTTCTCAGTATTATAAAATTCCTTGTGT  850

seq1  GTGGCCCCTGGCACCAGCACCAAAATTGTAATTACTATTGAATGTCAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCCCTGGCACCAGCACCAAAATTGTAATTACTATTGAATGTCAATA  900

seq1  GGAGATTTAGATGCCGCTAGTCCTTTTCCCTACTCTGGATTGTTCAGGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATTTAGATGCCGCTAGTCCTTTTCCCTACTCTGGATTGTTCAGGTA  950

seq1  ATCATTTGGTTGACAGCCACATGAAATAGGATGACTTAAATTTATGCAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTGGTTGACAGCCACATGAAATAGGATGACTTAAATTTATGCAAA  1000

seq1  TATAGTACCAACAAAATTAATGAGTTATCCCAGGTTCTCTTCACCATAAT  1050
      ||||||| |||| |||||||||||||||||||||||||||||| ||||||
seq2  TATAGTAACAAC-AAATTAATGAGTTATCCCAGGTTCTCTTCA-CATAAT  1048

seq1  AAATTCTACAC-TTTCTTATCTGTTATAAATAATCCTGTCCATTATTTTG  1099
      ||| ||||||| ||||||||||| ||||||| |||||||||| |||||||
seq2  AAA-TCTACACTTTTCTTATCTG-TATAAAT-ATCCTGTCCA-TATTTTG  1094

seq1  TTACAGCATTATT  1112
      |||||||||||||
seq2  TTACAGCATTATT  1107


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