BAC Information

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BAC

Clone NameB6Ng01-323E19
Chromosome1 (Build37)
Map Location 45,932,206 - 45,932,978
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041752, LOC383640, Col3a1, Col5a2, EG666799, LOC631429, LOC666814, EG666819, Wdr75, EG433297
Downstream geneLOC383644, Slc40a1, LOC670603, EG227054, LOC100042453, EG212225, Dnahc7b, LOC666855, Slc39a10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323E19.bB6Ng01-323E19.g
ACCGA111912GA111913
length1,168781
definitionB6Ng01-323E19.b B6Ng01-323E19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttacatatattgaatattagtcccctatctgatttaggatagg
taaagatcctttcccaatctgttggtggtctttttgtcttattgacggtg
tcttttaccttacagaagctttgcaattttatgaggttccatttgtcaat
tctcaatcttacaaaacaaaccattgctgttctattcaggaatttttccc
ctgtacccgtatatttgaggcttttccccactttctcttctataagtttc
agtgtctctggttttatgtaaagttccttgatccacttagatttgacctt
agtacaagaagataggaatggatcaattagcattcttctacatgttaacc
accagttgtgccagcaccatttgttgaaaatgctgtctttttcccactga
atggttttagctcccttgtcaaagatcaagtgaccataggtgtgtgggtt
catttctgggtcttcaattctatttcattcgtctacttgtctgttgctat
accagtaccatgcagttttttatcacaattgctctgtagtaaagctttag
gtcaggcatggtgattacaccagaggttcttttattctttagaagagttt
ttgctaccctaggttcttttgttattacaggtgaatttgcagattgccct
ttctaattcgttgaagaattgagttggaattttgatggggattgcattga
atctgtagattgcttttggcaagatagccatttttacaatgttgatcctg
ccaatccatgaggatgggagatctttccatctttcttcagagacttgaag
ttcttataatacagatctttcacttccttagttagagtcacaccaaggta
ttttatattatttgtgactattgagaaagggtgttgtttccctaattttc
ttttctcagcctgtttatcctatgtgtagagaaaggccattgacttgttt
gagttaattttatattcagctacttcactgagctgttttatcagttttag
gagttcttctggtgaaattttgggtcacttatatattactatcattcatt
tcaaggattcaggaatggctaatattgaattcatcaacgtatgcactata
taaccatctagaccaaccatgatcactttgtttagatgtctgagaagcca
cgtaacacattcgagctc
gaattcaagtgttgtgttagaaggatttgggggtgggggagggatcttag
acttacctttctgtgggcttgacaaatttagcaagttacttaaactcagt
gaagttcagttttctcaatgagacttttcatttttaattttcacaaatta
aaatctaatacctatatccttatatggaaatgtcattaactcccaattag
ggtaaaaaattactatcagatgaagaagcagccttaggcaatcacaccca
gtgtaataatataaagaaatcaagttccttggggcaagagagatggctca
gcacctaagagcattagctacttttccaaaggacctgggttcaattccaa
agacccacatggcagctcacaacagtctgtaactacagtcccaggatatc
cagcatcatcttctaatcttatagagcaccacacacaaatgtagtgcaca
gacatacgtgcagataaaacacccatacacatagaagagagagaaaatgc
aaagagataagtgtcaagggagttccaccttgtgtagaggcagtacaacc
ctgagtaaaagttaacccctgccatctgtgccctgcaccactgctgaatt
ttcgttttccttcaggagtttaacagaaaatctaaacaatttacaaaagt
gaaaaaagaaggccagaagataaactgtcaacctcagaatgacagtacaa
atgccatctttcagctagtgtgctcaaaattaaaggttgaaagtttaaga
ctggaacaaagggggttgggacgtggttggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_45932206_45932978
seq2: B6Ng01-323E19.g_64_843

seq1  GAATTCAAGTGTTGTGTTAGAAGGATTTGGGGGTGGGGGAGGGATCTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTGTTGTGTTAGAAGGATTTGGGGGTGGGGGAGGGATCTTAG  50

seq1  ACTTACCTTTCTGTGGGCTTGACAAATTTAGCAAGTTACTTAAACTCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACCTTTCTGTGGGCTTGACAAATTTAGCAAGTTACTTAAACTCAGT  100

seq1  GAAGTTCAGTTTTCTCAATGAGACTTTTCATTTTTAATTTTCACAAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTCAGTTTTCTCAATGAGACTTTTCATTTTTAATTTTCACAAATTA  150

seq1  AAATCTAATACCTATATCCTTATATGGAAATGTCATTAACTCCCAATTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAATACCTATATCCTTATATGGAAATGTCATTAACTCCCAATTAG  200

seq1  GGTAAAAAATTACTATCAGATGAAGAAGCAGCCTTAGGCAATCACACCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAAAATTACTATCAGATGAAGAAGCAGCCTTAGGCAATCACACCCA  250

seq1  GTGTAATAATATAAAGAAATCAAGTTCCTTGGGGCAAGAGAGATGGCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATAATATAAAGAAATCAAGTTCCTTGGGGCAAGAGAGATGGCTCA  300

seq1  GCACCTAAGAGCATTAGCTACTTTTCCAAAGGACCTGGGTTCAATTCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTAAGAGCATTAGCTACTTTTCCAAAGGACCTGGGTTCAATTCCAA  350

seq1  AGACCCACATGGCAGCTCACAACAGTCTGTAACTACAGTCCCAGGATATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCACATGGCAGCTCACAACAGTCTGTAACTACAGTCCCAGGATATC  400

seq1  CAGCATCATCTTCTAATCTTATAGAGCACCACACACAAATGTAGTGCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCATCTTCTAATCTTATAGAGCACCACACACAAATGTAGTGCACA  450

seq1  GACATACGTGCAGATAAAACACCCATACACATAGAAGAGAGAGAAAATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATACGTGCAGATAAAACACCCATACACATAGAAGAGAGAGAAAATGC  500

seq1  AAAGAGATAAGTGTCAAGGGAGTTCCACCTTGTGTAGGAGGCAGTACAAC  550
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAAGAGATAAGTGTCAAGGGAGTTCCACCTTGTGTA-GAGGCAGTACAAC  549

seq1  CCTGAGT-AAAGTTAACCCCTGCCATCTG-GTCCTGCAGCACTGCTGAAT  598
      ||||||| ||||||||||||||||||||| | |||||| |||||||||||
seq2  CCTGAGTAAAAGTTAACCCCTGCCATCTGTGCCCTGCACCACTGCTGAAT  599

seq1  TTTCG-TTTCCTTCAGGAG-TTAACAGAAAAGCTAAAACAATTTACAAAA  646
      ||||| ||||||||||||| ||||||||||| || |||||||||||||||
seq2  TTTCGTTTTCCTTCAGGAGTTTAACAGAAAATCT-AAACAATTTACAAAA  648

seq1  GTGAAAAAAGAAGG-CAGAAGAAAAACTGTTCAACCTCAGAATGACAGTA  695
      |||||||||||||| ||||||| |||||| ||||||||||||||||||||
seq2  GTGAAAAAAGAAGGCCAGAAGATAAACTG-TCAACCTCAGAATGACAGTA  697

seq1  CAAATGCCAT-TTTCAGGTAGTGTGC-CAAAATTAAAGGTTGAAAG-TTA  742
      |||||||||| |||||| |||||||| ||||||||||||||||||| |||
seq2  CAAATGCCATCTTTCAGCTAGTGTGCTCAAAATTAAAGGTTGAAAGTTTA  747

seq1  AGACTGGAACAA--GGGGGTGGGATGTGGTTGG  773
      ||||||||||||  |||| ||||| ||||||||
seq2  AGACTGGAACAAAGGGGGTTGGGACGTGGTTGG  780