MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-323H16
Chromosome	1 (Build37)
Map Location	153,238,394 - 153,342,459
singlet/doublet	doublet
Overlap gene	1200016B10Rik, 1190005F20Rik, Rnf2
Upstream gene	BC003331, Tpr, EG625534, EG545370, LOC668040, LOC676758, EG668050, LOC668055, 3110040M04Rik, LOC100043286, Ivns1abp
Downstream gene	Niban, Edem3, 1700025G04Rik, LOC668076, 5730449L18Rik, Glt25d2
Link	Open Mouse BAC browser

Click to get alignment info.

name	BC003331 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226499 MGI:2385108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Tpr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108989 MGI:1922066
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG625534 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625534 MGI:3643639
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 ESTs, 2 Proteins

name	EG545370 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545370 MGI:3646881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668040 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668040
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	LOC676758 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676758
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs

name	EG668050 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668050 MGI:3648958
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs

name	LOC668055 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668055
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs

name	3110040M04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73176 MGI:1920426
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs

name	LOC100043286 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs

name	Ivns1abp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:117198 MGI:2152389
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	1200016B10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66875 MGI:1914125
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1190005F20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98685 MGI:1916185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19821 MGI:1101759
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Niban (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:63913 MGI:2137237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Edem3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66967 MGI:1914217
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700025G04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69399 MGI:1916649
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668076 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins pseudo : _no_value

name	5730449L18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66637 MGI:1913887
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Glt25d2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269132 MGI:2138232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC003331 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116805316 GeneID:226499 MGI:2385108
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC003331 transcript_id : NM_001077237.1

name	BC003331 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116805314 GeneID:226499 MGI:2385108
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC003331 transcript_id : NM_145511.2

name	Tpr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27477056 GeneID:108989 MGI:1922066
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocated promoter region transcript_id : NM_133780.2

name	EG625534 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363984 GeneID:625534 MGI:3643639
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 2 Proteins product : predicted gene, EG625534, transcript variant 2 transcript_id : XM_890112.2

name	EG625534 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149234332 GeneID:625534 MGI:3643639
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : predicted gene, EG625534, transcript variant 1 transcript_id : XM_001480213.1

name	EG545370 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371430 GeneID:545370 MGI:3646881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG545370 transcript_id : NM_001024720.2

name	LOC676758 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234334 GeneID:676758
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs product : similar to U2-associated SR140 protein transcript_id : XM_001480223.1

name	EG668050 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94364009 GeneID:668050 MGI:3648958
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs product : predicted gene, EG668050 transcript_id : XM_993953.1

name	LOC668055 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94364011 GeneID:668055
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs product : similar to U2-associated SR140 protein transcript_id : XM_993975.1

name	3110040M04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94364013 GeneID:73176 MGI:1920426
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs product : RIKEN cDNA 3110040M04 gene transcript_id : XM_993996.1

name	LOC100043286 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234336 GeneID:100043286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs product : similar to U2-associated SR140 protein transcript_id : XM_001480239.1

name	Ivns1abp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87239989 GeneID:117198 MGI:2152389
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : influenza virus NS1A binding protein transcript_id : NM_054102.2

name	Ivns1abp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87239995 GeneID:117198 MGI:2152389
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : influenza virus NS1A binding protein transcript_id : NM_001039512.1

name	Ivns1abp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87239991 GeneID:117198 MGI:2152389
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : influenza virus NS1A binding protein transcript_id : NM_001039511.1

name	1200016B10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347972 GeneID:66875 MGI:1914125
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1200016B10 gene transcript_id : NM_025819.3

name	1190005F20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363477 GeneID:98685 MGI:1916185
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1190005F20 gene transcript_id : NM_026876.2

name	Rnf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802412 GeneID:19821 MGI:1101759
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 2 transcript_id : NM_011277.2

name	Niban (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130415 GeneID:63913 MGI:2137237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : niban protein transcript_id : NM_022018.2

name	Edem3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88900436 GeneID:66967 MGI:1914217
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ER degradation enhancer, mannosidase alpha-like 3 transcript_id : NM_001039644.1

name	1700025G04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130775 GeneID:69399 MGI:1916649
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700025G04 gene transcript_id : NM_197990.2

name	5730449L18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803579 GeneID:66637 MGI:1913887
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730449L18 gene transcript_id : NM_025677.2

name	Glt25d2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46195810 GeneID:269132 MGI:2138232
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycosyltransferase 25 domain containing 2 transcript_id : NM_177756.3

name	Tpr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27477057 GeneID:108989 MGI:1922066
definition	GO_component : GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : nuclear pore complex-associated protein Tpr protein_id : NP_598541.2

name	EG625534 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82882918 GeneID:625534 MGI:3643639
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_895205.1

name	EG625534 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149234333 GeneID:625534 MGI:3643639
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001480263.1

name	EG545370 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701546 CCDS:CCDS15357.1 GeneID:545370 MGI:3646881
definition	codon_start : 1 product : hypothetical protein LOC545370 protein_id : NP_001019891.1

name	LOC676758 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234335 GeneID:676758
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480273.1

name	EG668050 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94364010 GeneID:668050 MGI:3648958
definition	codon_start : 1 product : hypothetical protein protein_id : XP_999047.1

name	LOC668055 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94364012 GeneID:668055
definition	codon_start : 1 product : hypothetical protein protein_id : XP_999069.1

name	3110040M04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94364014 GeneID:73176 MGI:1920426
definition	codon_start : 1 product : hypothetical protein LOC73176 protein_id : XP_999090.1

name	LOC100043286 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234337 GeneID:100043286
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480289.1

name	Ivns1abp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87239990 CCDS:CCDS15359.1 GeneID:117198 MGI:2152389
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; kelch family protein Nd1 product : influenza virus NS1A binding protein isoform 2 protein_id : NP_473443.2

name	Ivns1abp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87239996 CCDS:CCDS15358.1 GeneID:117198 MGI:2152389
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; kelch family protein Nd1 product : influenza virus NS1A binding protein isoform 3 protein_id : NP_001034601.1

name	Ivns1abp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87239992 GeneID:117198 MGI:2152389
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; kelch family protein Nd1 product : influenza virus NS1A binding protein isoform 1 protein_id : NP_001034600.1

name	1200016B10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229006 CCDS:CCDS15360.1 GeneID:66875 MGI:1914125
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC66875 protein_id : NP_080095.2

name	1190005F20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74959790 CCDS:CCDS15361.1 GeneID:98685 MGI:1916185
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : N2,N2-dimethylguanosine tRNA methyltransferase-like protein_id : NP_081152.1

name	Rnf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563274 CCDS:CCDS15362.1 GeneID:19821 MGI:1101759
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0016604 - nuclear body [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0031519 - PcG protein complex [Evidence IDA]; GO:0001739 - sex chromatin [Evidence IDA]; GO:0000151 - ubiquitin ligase complex [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence IDA]; GO:0016564 - transcriptional repressor activity [Evidence IMP]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0009948 - anterior/posterior axis specification [Evidence IMP]; GO:0010003 - gastrulation (sensu Mammalia) [Evidence IMP]; GO:0016574 - histone ubiquitination [Evidence IDA] [Evidence IGI]; GO:0000278 - mitotic cell cycle [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : ring finger protein 2 protein_id : NP_035407.1

name	Niban (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11528504 GeneID:63913 MGI:2137237
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : niban protein protein_id : NP_071301.1

name	Edem3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88900437 GeneID:66967 MGI:1914217
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0004571 - mannosyl-oligosaccharide 1,2-alpha-mannosidase activity [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ER degradation enhancing alpha-mannosidase-like protein_id : NP_001034733.1

name	1700025G04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37574070 GeneID:69399 MGI:1916649
definition	codon_start : 1 product : RIKEN cDNA 1700025G04 protein_id : NP_932107.1

name	5730449L18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385138 CCDS:CCDS15363.1 GeneID:66637 MGI:1913887
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0008033 - tRNA processing [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC66637 protein_id : NP_079953.1

name	Glt25d2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46195811 CCDS:CCDS15364.1 GeneID:269132 MGI:2138232
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0009103 - lipopolysaccharide biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : glycosyltransferase 25 domain containing 2 protein_id : NP_808424.2

name	LOC668040 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668040
definition	number : 1 pseudo : _no_value

name	LOC668040 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668040
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:158863
definition	standard_name : C77892

name	(CDS detail)
type	STS
link
xref	UniSTS:124435
definition	standard_name : 41.MMHAP84FRF11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128705
definition	standard_name : D1Mit346

name	(CDS detail)
type	STS
link
xref	UniSTS:128533
definition	standard_name : D1Mit195

name	(CDS detail)
type	STS
link
xref	UniSTS:128642
definition	standard_name : D1Mit289

name	(CDS detail)
type	STS
link
xref	UniSTS:207213
definition	standard_name : BB283688

name	(CDS detail)
type	STS
link
xref	UniSTS:207212
definition	standard_name : AI132432

name	(CDS detail)
type	STS
link
xref	UniSTS:158865
definition	standard_name : AA960440

name	(CDS detail)
type	STS
link
xref	UniSTS:234231
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:207214
definition	standard_name : BB377812

name	(CDS detail)
type	STS
link
xref	UniSTS:165108
definition	standard_name : AW226554

name	(CDS detail)
type	STS
link
xref	UniSTS:158866
definition	standard_name : AI450156

name	(CDS detail)
type	STS
link
xref	UniSTS:210524
definition	standard_name : RH136542

name	(CDS detail)
type	STS
link
xref	UniSTS:178477
definition	standard_name : AI326319

name	(CDS detail)
type	STS
link
xref	UniSTS:499176
definition	standard_name : Cox7b

name	(CDS detail)
type	STS
link
xref	UniSTS:128817
definition	standard_name : D1Mit447

name	(CDS detail)
type	STS
link
xref	UniSTS:210039
definition	standard_name : RH136044

name	(CDS detail)
type	STS
link
xref	UniSTS:234233
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128884
definition	standard_name : D1Mit513

name	(CDS detail)
type	STS
link
xref	UniSTS:165109
definition	standard_name : AV212693

name	(CDS detail)
type	STS
link
xref	UniSTS:122828
definition	standard_name : 05.MMHAP66FLB2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:478939
definition	standard_name : D1Dcr3

name	(CDS detail)
type	STS
link
xref	UniSTS:162235
definition	standard_name : RH125413

name	LOC668076 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234305 GeneID:668076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins product : similar to Rpl7a protein pseudo : _no_value transcript_id : XR_034002.1

clone name	MSMg01-470O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177L02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-323H16.b	B6Ng01-323H16.g
ACC	GA112043	GA112044
length	1,145	1,080
definition	B6Ng01-323H16.b	B6Ng01-323H16.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(153,238,394 - 153,239,537)	(153,341,363 - 153,342,459)
sequence	gaattcaatatagttaggctgcccttgcactcactatataatagcagttt accttaacttctgatcctctcgcccccacctaccaagtgcttggattata agcatgtgccaccacactagattcacttaatactttaaccaattactgtg aaagaaaatgaaagactcatacctttacagagattttcatataggctctc aacagttacaagcaagttattttccataactaatccaaatacagccagcc aatgttttttaaagcactgtaatagatttattagagtccatggtggtttc aaatacagcacctagaaagttacaaaatcattatctactgatttgtttta cctattatgtaaacatgccaatgtaggaacttctatacatatccctaata gaaatatagctagtcagactatttttaaagtaagaagtgctaatcacaat tttaaactgtaagtctatcacagactgattttatagaattcatattagta acctttagtttcataactttttagtacacaaagaaagcaaactctaatta gtgaagaagcatagtacctcaacctactttttaaaaaattagtgcttatt aaaatgtgtatgagtttttctgcatgtttgtgtactatgtgtgtccctgg tcccctcagaggccagaagaaaacatcagattccctggaattggggttac agttgtgggtggccacgtgaatgctaggacctgactgggttctatgcaag aacaagtgccacttagtaaccacttagcctttcaatctactttcctatat ggtcctttccgtaatcaaaataatctaaatacttcagactaccagagggg gggaaaatcaaacagtattatcatttccctacacttacaaagacatactt atagaaaactgatagatatatttataaataaatatagatatttgtaataa ttcaggaagatgtcaatgccttttttctgaaacctccattatttctatga aagatccaatttatactaaatcctccaagatcggtttttattattctcta ttatttttggatcagcattgatcattaggtagcaaaacatatcacactgt agttagattcttgctgaatagctgaataaaatacctcagctcaat	gaattctcattatttacactattttctatgcagaatttaattcagcgaat gagggctgtcttggaactcagccaaatgttgtctagaaggcttcctatag atcgcagaaagggtagtgtgtgtaataggaatttcagaggtggaggtcga gacttggtttgcagggttaggattatacagctctgggtgtgatgctctcc ccctttgcatgaatgagatggtgccctaggctcagtcgccagccagcact tagaaaaagactgtggggggagagacttggtttctaggtcttcctccaat tacaagcagatcttggccgatctgagtatgattgtattcatgtgtctgta tgcccgcccagttgacccaatggaagatttgtaacgatactaagacctaa ggcctgacctacctagtaagatcctgagccaaaaaacccgaagaaggagg aaagaagccaaggatgcaagtcgtttgccaagtttgttctgtcccctgca gcagtaccaccaacacacaccaacacatgcatagtgtattatacagagct ttgctttagtaggcatcacaaatatatacaaataaatacacacacataca cactattggagcttcttgctttaaaagcgttatttctacatcattttatc tttataaaatttctattttttctggtaagatgagccttttacattgttcc aggttccttattaaatattccattatttattaagctaaatttattaaatg aaggcaagaatagtgtttacttcaagagactctaggattttgtagaaagc agtaagtgttgtaaatattacctataccaattgcctgtagcccatgctag cttcaaaacattaaattctcttgactcaaactcctaaggcattattccct agactgatattatggtcttaagatatgactttttttatcagtaattttaa ctactagctgctttcaaaagggtttttcctcttagtttttaaatgaatat tcttctagttactctattggtggtatgctttctgtgagccttgctgtctg actccagtagactgggccttgtctgaactc
quality values	Open. Hide. 58 38 31 34 58 31 21 39 58 54 62 49 47 62 62 54 62 47 62 62 54 62 62 62 62 62 62 47 56 49 62 47 51 62 54 54 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 59 62 62 59 59 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 59 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 58 58 58 58 58 58 41 58 58 58 58 58 58 49 49 44 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 54 58 58 58 54 58 58 54 58 50 58 58 54 54 54 45 52 54 54 58 52 58 58 54 58 54 58 58 58 58 41 52 58 58 58 58 51 49 51 47 51 54 58 51 58 54 52 47 41 51 58 58 51 48 58 46 58 50 58 54 58 58 50 58 58 58 58 50 54 58 49 52 50 51 58 58 58 58 58 48 51 53 40 46 46 58 48 58 54 58 53 58 51 48 58 58 39 36 46 50 49 44 58 54 53 53 53 39 49 16 54 50 48 40 52 58 40 31 49 12 15 31 52 38 51 52 52 42 46 39 51 50 50 43 49 58 50 58 41 42 51 50 58 58 53 50 41 35 41 50 52 53 53 51 50 58 58 58 41 54 46 23 49 41 41 45 53 51 54 37 42 54 34 33 39 21 49 41 23 18 39 46 34 21 26 54 54 53 39 35 42 39 45 42 49 33 14 47 44 54 19 31 28 27 40 53 39 21 51 33 39 54 40 53 31 35 53 45 39 42 33 42 54 42 42 35 53 49 53 54 53 33 24 36 33 32 28 31 33 53 53 40 31 46 31 45 32 31 32 47 51 26 32 31 27 49 20 18 42 39 34 36 35 34 40 32 49 52 33 35 45 33 36 42 43 31 46 32 31 32 37 31 31 33 35 29 42 19 31 31 30 27 21 31 12 6 47 47 47 47 47 33 41 46 46 30 31 39 32 48 34 33 30 30 31 43 35 31 31 31 32 24 31 48 46 11 46 18 32 29 31 26 43 31 9 12 31 29 46 27 30 29 22 9 18 24 11 6 34 10 27 32 31 32 32 46 30 27 29 36 31 27 26 32 27 19 29 31 26 31 46 37 11 13 24 46 33 29 28 48 26 33 22 26 25 31 23 9 13 18 43 18 31 19 31 25 7 17 11 17 25 31 10 13 10 29 31 19 19 16 31 31 27 32 24 32 36 14 17 17 48 48 39 48 7 7 15 22 32 39 14 9 12 21 17 12 10 6 5 6 16 43 17 15 18 22 27 17 30 48 29 25 21 25 15 25 15 11 15 43 30 14 8 6 18 14 11 31 10 25 18 9 16 4 12 8 9 9 6 11 20 13 9 34 22 32 27 11 14 11 7 12 8 12 9 5 15 6 6 7 5 27 15 12 26 10 10 20 17 8 15 26 10 6 14 10 27 22 17 15 13 21 10 15 13 18 21 9 6 11 20 23 20 30 26 7 8 4 4 6 14 7 6 4 6 18 14 7 2 3 4 3 5 9 5 24 4 4 6 11 8 21 14 13 5 10 5 18 9 5 18 8 13 11 6 10 16 30 29 6 12 10 14 7 13 6 11 5 12 5 3 7 2 3	Open. Hide. 62 47 51 44 62 62 62 44 47 62 59 62 59 62 59 62 59 59 62 59 59 62 62 62 62 62 59 62 62 62 59 59 62 62 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 43 62 62 62 49 62 62 62 62 62 62 56 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 45 62 62 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 54 62 62 62 62 58 58 58 58 58 58 58 58 58 54 47 58 58 58 58 58 58 58 58 58 58 58 58 58 49 58 58 54 58 58 54 58 47 58 58 58 54 58 58 52 58 58 48 58 58 54 58 49 58 54 58 54 54 58 58 52 58 58 58 49 58 54 58 58 58 58 58 54 52 51 46 58 58 51 51 58 52 58 49 47 58 51 58 58 58 58 58 54 52 53 53 54 53 58 51 51 58 53 53 58 53 58 50 58 51 58 53 53 49 58 48 51 50 58 51 58 50 58 53 58 40 58 51 58 42 58 47 58 53 58 40 58 49 58 46 52 49 47 49 30 49 48 41 43 46 46 54 51 54 40 58 58 40 42 41 49 58 41 49 47 43 44 50 53 58 54 51 47 52 50 40 51 52 50 49 58 58 40 50 49 54 52 54 54 49 49 27 54 54 47 41 54 36 50 41 52 49 54 54 54 54 53 51 37 54 54 31 40 54 37 54 31 52 51 24 50 44 37 54 54 39 34 45 32 34 45 53 34 39 33 44 31 53 51 42 37 33 39 47 44 45 42 38 42 54 45 42 39 51 45 37 33 33 53 45 41 34 53 34 33 26 31 31 33 41 45 40 28 53 52 42 53 45 41 31 53 32 49 41 34 35 28 52 23 31 17 25 24 30 46 29 45 30 31 34 37 27 51 45 31 36 43 43 36 28 30 30 44 13 25 20 31 36 36 31 21 31 31 18 47 47 31 31 21 31 32 46 48 31 31 31 31 21 22 30 35 36 34 42 29 25 46 31 31 47 46 36 38 43 26 31 31 39 28 26 27 26 26 19 20 33 37 31 29 21 24 27 39 27 31 30 39 41 19 22 27 36 31 34 42 31 37 37 23 31 37 44 48 31 27 25 31 24 20 47 30 26 37 34 31 31 27 22 37 30 20 32 24 32 48 31 26 32 17 19 31 33 7 10 10 6 19 30 13 17 12 30 28 31 21 15 32 12 14 14 32 22 21 21 31 17 26 21 21 25 34 23 28 19 8 30 25 11 17 4 18 30 32 34 21 26 48 48 48 33 43 6 9 13 18 24 28 22 27 22 8 32 34 22 11 11 22 28 21 27 26 11 6 14 28 28 26 26 40 8 24 12 31 28 21 17 34 18 18 19 19 17 21 6 9 19 28 7 23 20 7 25 34 47 34 11 16 28 21 15 6 9 4 8 6 5 8 11 20 8 15 12 12 15 4 8 10 13 13 11 5 18 8 16 8 9 21 6 8 24 18 18 17 5 17 28 20 8 4 6 4 6 13 5 14 9 5 6 9 4 10 11 7 22 9 4 3 4 15 10 17 6 4 16 11 8 26 10 9 20 17 17 4 7 12 8 4 1 2 10 11 11 11 7 11 1

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_153238394_153239537
seq2: B6Ng01-323H16.b_46_1190

seq1  GAATTCAATATAGTTAGGCTGCCCTTGCACTCACTATATAATAGCAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATAGTTAGGCTGCCCTTGCACTCACTATATAATAGCAGTTT  50

seq1  ACCTTAACTTCTGATCCTCTCGCCCCCACCTACCAAGTGCTTGGATTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAACTTCTGATCCTCTCGCCCCCACCTACCAAGTGCTTGGATTATA  100

seq1  AGCATGTGCCACCACACTAGATTCACTTAATACTTTAACCAATTACTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTGCCACCACACTAGATTCACTTAATACTTTAACCAATTACTGTG  150

seq1  AAAGAAAATGAAAGACTCATACCTTTACAGAGATTTTCATATAGGCTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAATGAAAGACTCATACCTTTACAGAGATTTTCATATAGGCTCTC  200

seq1  AACAGTTACAAGCAAGTTATTTTCCATAACTAATCCAAATACAGCCAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTACAAGCAAGTTATTTTCCATAACTAATCCAAATACAGCCAGCC  250

seq1  AATGTTTTTTAAAGCACTGTAATAGATTTATTAGAGTCCATGGTGGTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTTTAAAGCACTGTAATAGATTTATTAGAGTCCATGGTGGTTTC  300

seq1  AAATACAGCACCTAGAAAGTTACAAAATCATTATCTACTGATTTGTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAGCACCTAGAAAGTTACAAAATCATTATCTACTGATTTGTTTTA  350

seq1  CCTATTATGTAAACATGCCAATGTAGGAACTTCTATACATATCCCTAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTATGTAAACATGCCAATGTAGGAACTTCTATACATATCCCTAATA  400

seq1  GAAATATAGCTAGTCAGACTATTTTTAAAGTAAGAAGTGCTAATCACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATAGCTAGTCAGACTATTTTTAAAGTAAGAAGTGCTAATCACAAT  450

seq1  TTTAAACTGTAAGTCTATCACAGACTGATTTTATAGAATTCATATTAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTGTAAGTCTATCACAGACTGATTTTATAGAATTCATATTAGTA  500

seq1  ACCTTTAGTTTCATAACTTTTTAGTACACAAAGAAAGCAAACTCTAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTAGTTTCATAACTTTTTAGTACACAAAGAAAGCAAACTCTAATTA  550

seq1  GTGAAGAAGCATAGTACCTCAACCTACTTTTTAAAAAATTAGTGCTTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAAGCATAGTACCTCAACCTACTTTTTAAAAAATTAGTGCTTATT  600

seq1  AAAATGTGTATGAGTTTTTCTGCATGTTTGTGTACTATGTGTGTCCCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTGTATGAGTTTTTCTGCATGTTTGTGTACTATGTGTGTCCCTGG  650

seq1  TCCCCTCAGAGGCCAGAAGAAAACATCAGATTCCCTGGAATTGGGGTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCAGAGGCCAGAAGAAAACATCAGATTCCCTGGAATTGGGGTTAC  700

seq1  AGTTGTGGGTGGCCACGTGAATGCTAGGACCTGACTGGGTTCTATGCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGGGTGGCCACGTGAATGCTAGGACCTGACTGGGTTCTATGCAAG  750

seq1  AACAAGTGCCACTTAGTAACCACTTAGCCTTTCAATCTACTTTCCTATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTGCCACTTAGTAACCACTTAGCCTTTCAATCTACTTTCCTATAT  800

seq1  GGTCCTTTCCGTAATCAAAATAATCTAAATACTTCAGACTACCAGA-GGG  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGTCCTTTCCGTAATCAAAATAATCTAAATACTTCAGACTACCAGAGGGG  850

seq1  GGGAAAATCAAACAGTATTATCATTT-CCTACACTTACAAAGACATACTT  898
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGGAAAATCAAACAGTATTATCATTTCCCTACACTTACAAAGACATACTT  900

seq1  ATAGAAAACTGATAGATATATTTATAAATAAATATAGATATTTGTAAATA  948
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATAGAAAACTGATAGATATATTTATAAATAAATATAGATATTTGT-AATA  949

seq1  ATTCAGGAAGATGTCAATGCC-TTTTTCTGAAACCTCCA-TATTTCTATG  996
      ||||||||||||||||||||| ||||||||||||||||| ||||||||||
seq2  ATTCAGGAAGATGTCAATGCCTTTTTTCTGAAACCTCCATTATTTCTATG  999

seq1  AAAGATCCAATTTATACT-AATCCTCCAAGATC-GTTTTTATTATTCTCT  1044
      |||||||||||||||||| |||||||||||||| ||||||||||||||||
seq2  AAAGATCCAATTTATACTAAATCCTCCAAGATCGGTTTTTATTATTCTCT  1049

seq1  ATTATTTTTGGATCAGCATTTGATCATTAGGTAGC-AAACATATCACACT  1093
      |||||||||||||||||| |||||||||||||||| ||||||||||||||
seq2  ATTATTTTTGGATCAGCA-TTGATCATTAGGTAGCAAAACATATCACACT  1098

seq1  GGTAAGTTTAGAATCTTGCTGAGTAGCTGGAATAAATACCTCAGCTACAA  1143
       |||   ||||| ||||||||| |||||| |  ||||||||||||| |||
seq2  -GTA--GTTAGATTCTTGCTGAATAGCTGAATAAAATACCTCAGCT-CAA  1144

seq1  T  1144
      |
seq2  T  1145

seq1: chr1_153341363_153342459
seq2: B6Ng01-323H16.g_66_1145 (reverse)

seq1  GAGTTCAAGACCA-GCCCAGTCTACTGGGAGTTCCAGGACAGCCAGGGCT  49
      |||||| |||| | |||||||||||| |||||  || |||||| |||   
seq2  GAGTTC-AGACAAGGCCCAGTCTACT-GGAGT--CA-GACAGCAAGG--C  43

seq1  TCACAGAAAAGCCAATAACAACAATAGAGTAACCTAGAAGATATTTCAAT  99
      |||||| |||||  ||| || ||||||||||| ||||||||   ||||  
seq2  TCACAG-AAAGC--ATACCACCAATAGAGTAA-CTAGAAGAATATTCA--  87

seq1  TTTAAAAACTAAGAGGAAAAAACCCTTTTGGAAAGCAGCTAGTAGTTAAA  149
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  TTTAAAAACTAAGAGG-AAAAACCCTTTT-GAAAGCAGCTAGTAGTTAAA  135

seq1  ATTTACTGAT-AAAAAAGTCATATTCTTTAAGACCATAATATCAGTCTAG  198
      | |||||||| |||||||||||||   |||||||||||||||||||||||
seq2  A-TTACTGATAAAAAAAGTCATAT--CTTAAGACCATAATATCAGTCTAG  182

seq1  GGAATAATGCCCTTAGGAGTTTGAGTCAAGAGAATTTAATGTTTTGAAGC  248
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAATG-CCTTAGGAGTTTGAGTCAAGAGAATTTAATGTTTTGAAGC  231

seq1  TAGCATGGGCTACAGGCAATTGGTATAGGTAATATTTACAACACTTACTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATGGGCTACAGGCAATTGGTATAGGTAATATTTACAACACTTACTG  281

seq1  CTTTCTACAAAATCCTAGAGTCTCTTGAAGTAAACACTATTCTTGCCTTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTACAAAATCCTAGAGTCTCTTGAAGTAAACACTATTCTTGCCTTC  331

seq1  ATTTAATAAATTTAGCTTAATAAATAATGGAATATTTAATAAGGAACCTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATAAATTTAGCTTAATAAATAATGGAATATTTAATAAGGAACCTG  381

seq1  GAACAATGTAAAAGGCTCATCTTACCAGAAAAAATAGAAATTTTATAAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATGTAAAAGGCTCATCTTACCAGAAAAAATAGAAATTTTATAAAG  431

seq1  ATAAAATGATGTAGAAATAACGCTTTTAAAGCAAGAAGCTCCAATAGTGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGATGTAGAAATAACGCTTTTAAAGCAAGAAGCTCCAATAGTGT  481

seq1  GTATGTGTGTGTATTTATTTGTATATATTTGTGATGCCTACTAAAGCAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGTGTGTATTTATTTGTATATATTTGTGATGCCTACTAAAGCAAA  531

seq1  GCTCTGTATAATACACTATGCATGTGTTGGTGTGTGTTGGTGGTACTGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTATAATACACTATGCATGTGTTGGTGTGTGTTGGTGGTACTGCT  581

seq1  GCAGGGGACAGAACAAACTTGGCAAACGACTTGCATCCTTGGCTTCTTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGGACAGAACAAACTTGGCAAACGACTTGCATCCTTGGCTTCTTTC  631

seq1  CTCCTTCTTCGGGTTTTTTGGCTCAGGATCTTACTAGGTAGGTCAGGCCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCTTCGGGTTTTTTGGCTCAGGATCTTACTAGGTAGGTCAGGCCT  681

seq1  TAGGTCTTAGTATCGTTACAAATCTTCCATTGGGTCAACTGGGCGGGCAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTTAGTATCGTTACAAATCTTCCATTGGGTCAACTGGGCGGGCAT  731

seq1  ACAGACACATGAATACAATCATACTCAGATCGGCCAAGATCTGCTTGTAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACACATGAATACAATCATACTCAGATCGGCCAAGATCTGCTTGTAA  781

seq1  TTGGAGGAAGACCTAGAAACCAAGTCTCTCCCCCCACAGTCTTTTTCTAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGAAGACCTAGAAACCAAGTCTCTCCCCCCACAGTCTTTTTCTAA  831

seq1  GTGCTGGCTGGCGACTGAGCCTAGGGCACCATCTCATTCATGCAAAGGGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGCTGGCGACTGAGCCTAGGGCACCATCTCATTCATGCAAAGGGG  881

seq1  GAGAGCATCACACCCAGAGCTGTATAATCCTAACCCTGCAAACCAAGTCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCATCACACCCAGAGCTGTATAATCCTAACCCTGCAAACCAAGTCT  931

seq1  CGACCTCCACCTCTGAAATTCCTATTACACACACTACCCTTTCTGCGATC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCTCCACCTCTGAAATTCCTATTACACACACTACCCTTTCTGCGATC  981

seq1  TATAGGAAGCCTTCTAGACAACATTTGGCTGAGTTCCAAGACAGCCCTCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGAAGCCTTCTAGACAACATTTGGCTGAGTTCCAAGACAGCCCTCA  1031

seq1  TTCGCTGAATTAAATTCTGCATAGAAAATAGTGTAAATAATGAGAATTC  1097
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCTGAATTAAATTCTGCATAGAAAATAGTGTAAATAATGAGAATTC  1080

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information