BAC Information

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BAC

Clone NameB6Ng01-323I02
Chromosome1 (Build37)
Map Location 10,710,988 - 10,712,092
singlet/doubletsinglet
Overlap genenone
Upstream geneVcpip1, LOC100039536, LOC665173, Sgk3, EG620986, LOC100039643, 6030422M02Rik, LOC100039596, 4930418G15Rik, Cops5, Cspp1, Arfgef1, Cpa6
Downstream geneLOC433271, C030045D06Rik, A830018L16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323I02.bB6Ng01-323I02.g
ACCGA112063GA112064
length9851,089
definitionB6Ng01-323I02.b B6Ng01-323I02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgtggaatcacaaatggccaaaaagcatctaaagaaatg
ttcaacgttcttagtcatcaaggaaatgccaatggaaatgacctcacagt
aatcagaatggctaagatcaaaaactcagttgacagtagatactggtgag
gatgtggagaaagaggaacattcagcgattcttggtgggattgcaagctg
gtaaaaccactttggaaaacaatctggccattgcccagaaaattggaaat
atttctacctgaagacccagttatatcactcttgggcatatacccataaa
atgcttcaacatgtaacaaggaaatatagcccactatgttcatagcagcc
ttatttataatagccaggagctggaaacatctcggatgtccctcaacaga
agaacggatacagaaaatgtggtacatttatatagtagagtactactcag
ctagaaactgtgatacatttatacagtaaagtactactcagctgaaacaa
tgaccgcatgaattcacaggggaatatatggaactagaaaatatcatcct
gagtgaggtaaccctatatattcattgataagtggacattagcccaaaag
ctcagaatacccatgatacaactcacagaccataaagcttaacaagaaag
aagaccaaagtgtggatacttcaatcctatttagaagggggaacaaaata
atcatgggaggtagcaggagggaggaacctgggagggagagatgagtggg
agcaaataaaaggggccaggattgggtatggcaaaagacaggagagaagt
caagagggttgggaaaatgaatagaaatatgtaacagtgggatggatctg
tgggtccagctacatatgtagcaaaggattgctttacctggctgacatca
atgagaggggagactcttggtcctatgcacgatctgctgtcccaaatgta
ggaggatgctaagagtggctgacgcacgactggga
gaattcaacagagtgagctccatagcagaagatttcccaggtttggggaa
tgggacaaagaggggaaagattagtacaactaattctttttttttttttt
tttaatgtgatctggttaattttctctctcctttttttaatttttaattt
ttattttttattattattttcatttttattttttaattaggtattttctt
catttacatttccaatactatcccaaaactcccccataccctccctccca
ctcccctacccacccactcccacttcttggccctggcattcccctgtact
gaggcatataaagtttgcaagaccaatgggcctctctttccaatgatggc
caactaggccctcttctgctacatatgcagctagagacacgagctctggg
ggtacgggttagttcatgttgttgttccacctatagggttgcagttccct
tcagctccttaggtaccttctctagctcctccattgggggccctgtgttc
cattcaatagctgactgtgatcatccacttctgtgtttgctaggccccgg
catagcctcacaagagacagctatatcagggtcccttcagcaaaatcttg
ctagtgtatgcaatggtacaactaattcagggagaatttgaaaatgtcag
agaatcattttaaatgctcttggctgtcatgaacctgaaactgaccctgt
caggagagcttggctgacctcgagtagaagttatggggaagggttatgct
tcccccgcagtgtggggtgcaggagttctggaagcttcacagggatgatc
gactgcagtaaagccactggagctcactgtctgcttaaaagcaccagtgc
tcaggaaaaagctgacaggctgtgtcctcacaccctcagagctaaggcaa
agcaacccgcatggtgggggtttctgggtgagtagatgttgtggctgcta
agaaattctggagcagttcctcactaaacatgggaattcattgggaatgg
ctgctcggaggtcctgaattgggttcctcccacccagtctaggaagagga
gaatatgcatggctcctcttaatataaggagacttgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_10710988_10712092
seq2: B6Ng01-323I02.g_62_1150 (reverse)

seq1  CAGCAAGTCT--TGATTTTTAGAAGGAGCCATGCTTTTTCTCCTCTTCCT  48
      ||||||||||  | || || || ||||||||||| | |||||||||||||
seq2  CAGCAAGTCTCCTTATATTAAG-AGGAGCCATGCATATTCTCCTCTTCCT  49

seq1  AGACTGTGGTGGGGGAGGGAACACAAATCAAGAAACCTCGGAGCAAGCCA  98
      |||||| ||||||    ||||| ||| ||| |  ||||| |||| |||||
seq2  AGACTG-GGTGGG---AGGAACCCAATTCAGG--ACCTCCGAGC-AGCCA  92

seq1  TTTCCCAATGGAAATTTCCCATGGTTTTAGTGAAGGAACTGGCTCAGAAT  148
       |||||||||   | ||||||||  ||||||| ||||||||   ||||| 
seq2  -TTCCCAATG---AATTCCCATG--TTTAGTG-AGGAACTGCTCCAGAA-  134

seq1  TTTCTTAGCAGCCACAAACATCTACTCACCCAGAAA-CCCCACATTGCGG  197
      ||||||||||||||| |||||||||||||||||||| ||||||  |||||
seq2  TTTCTTAGCAGCCAC-AACATCTACTCACCCAGAAACCCCCACCATGCGG  183

seq1  GTTTGCTTTGCCTTAGCTCTGAGGGTGTGAGGACACAGCCTGTCAGCTTT  247
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-TTGCTTTGCCTTAGCTCTGAGGGTGTGAGGACACAGCCTGTCAGCTTT  232

seq1  TTCCTGAGCACTGGTGCTTTTTAAGCAGACAGTGAGCTCCAGTGGCTTTA  297
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTCCTGAGCACTGGTGC-TTTTAAGCAGACAGTGAGCTCCAGTGGCTTTA  281

seq1  CTGCAGTCGATCATCCCTGTGAAGCTTCCAGAACTCCTGCACCCCACACT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTCGATCATCCCTGTGAAGCTTCCAGAACTCCTGCACCCCACACT  331

seq1  GCGGGGGAAGCATAACCCTTCCCCATAACTTCTACTCGAGGTCAGCCAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGGGAAGCATAACCCTTCCCCATAACTTCTACTCGAGGTCAGCCAAG  381

seq1  CTCTCCTGACAGGGTCAGTTTCAGGTTCATGACAGCCAAGAGCATTTAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTGACAGGGTCAGTTTCAGGTTCATGACAGCCAAGAGCATTTAAA  431

seq1  ATGATTCTCTGACATTTTCAAATTCTCCCTGAATTAGTTGTACCATTGCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCTCTGACATTTTCAAATTCTCCCTGAATTAGTTGTACCATTGCA  481

seq1  TACACTAGCAAGATTTTGCTGAAGGGACCCTGATATAGCTGTCTCTTGTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTAGCAAGATTTTGCTGAAGGGACCCTGATATAGCTGTCTCTTGTG  531

seq1  AGGCTATGCCGGGGCCTAGCAAACACAGAAGTGGATGATCACAGTCAGCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATGCCGGGGCCTAGCAAACACAGAAGTGGATGATCACAGTCAGCT  581

seq1  ATTGAATGGAACACAGGGCCCCCAATGGAGGAGCTAGAGAAGGTACCTAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATGGAACACAGGGCCCCCAATGGAGGAGCTAGAGAAGGTACCTAA  631

seq1  GGAGCTGAAGGGAACTGCAACCCTATAGGTGGAACAACAACATGAACTAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGAAGGGAACTGCAACCCTATAGGTGGAACAACAACATGAACTAA  681

seq1  CCCGTACCCCCAGAGCTCGTGTCTCTAGCTGCATATGTAGCAGAAGAGGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTACCCCCAGAGCTCGTGTCTCTAGCTGCATATGTAGCAGAAGAGGG  731

seq1  CCTAGTTGGCCATCATTGGAAAGAGAGGCCCATTGGTCTTGCAAACTTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTTGGCCATCATTGGAAAGAGAGGCCCATTGGTCTTGCAAACTTTA  781

seq1  TATGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGG  831

seq1  TAGGGGAGTGGGAGGGAGGGTATGGGGGAGTTTTGGGATAGTATTGGAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGAGTGGGAGGGAGGGTATGGGGGAGTTTTGGGATAGTATTGGAAA  881

seq1  TGTAAATGAAGAAAATACCTAATTAAAAAATAAAAATGAAAATAATAATA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATGAAGAAAATACCTAATTAAAAAATAAAAATGAAAATAATAATA  931

seq1  AAAAATAAAAATTAAAAATTAAAAAAAGGAGAGAGAAAATTAACCAGATC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAAAATTAAAAATTAAAAAAAGGAGAGAGAAAATTAACCAGATC  981

seq1  ACATTAAAAAAAAAAAAAAAAAGAATTAGTTGTACTAATCTTTCCCCTCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAAAAAAAAAAAAAAAAGAATTAGTTGTACTAATCTTTCCCCTCT  1031

seq1  TTGTCCCATTCCCCAAACCTGGGAAATCTTCTGCTATGGAGCTCACTCTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCCATTCCCCAAACCTGGGAAATCTTCTGCTATGGAGCTCACTCTG  1081

seq1  TTGAATTC  1105
      ||||||||
seq2  TTGAATTC  1089