BAC Information

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BAC

Clone NameB6Ng01-323J02
Chromosome1 (Build37)
Map Location 147,941,205 - 147,942,253
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625057, LOC383570
Downstream geneLOC383571, B830045N13Rik, LOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323J02.bB6Ng01-323J02.g
ACCGA112111GA112112
length1,1991,057
definitionB6Ng01-323J02.b B6Ng01-323J02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatttggtgttggattta
gtcaaatgctttctccgcatctaagaagatgatcatgtggtttttgtctt
tgagtttgtttatataatggattatgttgatggatttccatatattaaac
catccctgcatccctggaataaaacctacttggtcaggatggatgattgt
tttaatgttttcttggattctgttagcgaggattttactgaatatttttg
cattaatattcatatgggaaattgatctgaagttctctgtctttgttgga
tctttctgtggtttaagtatcagagtaattgtggcttcatagaatgagtt
gggtagagtaccttctacttctattttgtggaatagtttgtgaagaactg
gaattagatcttctttgaaggtctgatagaactctgcactaaacccatct
ggtcctgggcttttattggttgggagaccattaatgactgcttctatttc
tttaggggatatgggactgtttagtttttaacttgatcctggtttaactt
tggtacctggtatctgtctagaaatttgtccatttcatccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttgggtt
tcttcagggtttgttgttatgtctcccttttcatttctgattttgttaat
taggaaactgttcctgtgccctctagtgagtctggctaagggtttatcta
tcttgttgattttctcaagaaccagctcctcatttggtttttctttgaat
agttcttcttgtttccacttggttgatttgcccctgagtttgattatttc
ctgacatctactcctctggagttaatttgcttcccttttttctagagctt
ttaggcgtgttgtcaagctgctagtgtgtgctctctctagtttctttggg
aggcactcagagctatgagtttcccttcttagaaatgctttcatagtgtc
ccatagatgggtatatgtggcttcccttttataaactctaaaagtcttaa
tttctttcttattctctgaccagtatcatgagaagagttgctcatttcac
gctgaagatgctttcatcaatatgttggtatgagatacagcctagttcat
cgtggatctactgaggacgacttgcgggcaaacacatctctaatatatc
gaattcagaaatgaagacagtcattagatacaatttaatgggaaggataa
aaattcagaataatgtatgaactttgtttaggaaaaaatgtatgagtaaa
ttttcattaagtgtaacaaatgaatcaaatgaccgtacacggtaatacca
tcttggtacagggcatctgatacctttctgggcagtttaaattgttttaa
gtttttagaaaatgcttacatcatttaaacattatgattattctcaaaaa
agaaaacaaagggttaaaggcctgtgccacatttcaagtttctctttaaa
tggtatcccaaatgaatttcaaagcaccatcaaaacaatattccaccaaa
gcaagggcattttttctcattatcttttaattagcttttgcagaaatata
actaagaacaagtctaaatggctactttaacaatgcaacaatgtataata
aatgataaatgcttactttcttctcatctatactacactgacccatatgt
gcagaattggtatacaaaacaatgttatgttgaacccattatgttaaaat
gcttacagcttaaaaataattgtgggcaaaaggattattttgtattaaaa
ttagaatatgtacaattactactgctaatacatatgaatagaaaatagga
ttcccatttaatcatgcaatttttgttctggtatagcccataggattttt
atttgtttgtttgtttgtttttctttccattttttattaggtatttagct
catttacatttccaatgctataccaaatgtcccccatacccacccacccc
cactcccctacccgcccactccccctttttggccctggcgttcccctgtt
ctggggcatataaagtttgtgtgttcaatgggcctctctttccagtggat
ggccgactagagccattcttttgatacataatgcagctagagtcagagct
tccggggtactggttagttcataatgttgatcacctataggtttgcagat
tctctttagcttctttgggtactttctcttagctccttccattgggaagc
tctgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_147941205_147942253
seq2: B6Ng01-323J02.g_67_1123 (reverse)

seq1  TCACAGGGC-TCCCAATGG-AGGAGCT-AGAGAAAGTACCC-AAGGAGCT  46
      |||||| || ||||||||| ||||||| ||||||||||||| ||| ||||
seq2  TCACAGAGCTTCCCAATGGAAGGAGCTAAGAGAAAGTACCCAAAGAAGCT  50

seq1  AAAG-GGATCTGCAACCCTATAGGTGGATCAACATTATGAACTAACCAGT  95
      |||| | |||||||| ||||||||| ||||||||||||||||||||||||
seq2  AAAGAGAATCTGCAAACCTATAGGT-GATCAACATTATGAACTAACCAGT  99

seq1  ACCCCGG-AGCTCTTGACTCTAGCTGCA-TATGTATCAAAAG-ATGGC-C  141
      ||||||| ||||| |||||||||||||| ||||||||||||| ||||| |
seq2  ACCCCGGAAGCTC-TGACTCTAGCTGCATTATGTATCAAAAGAATGGCTC  148

seq1  TAGTCGGCCAT-CACTGGAAAGAGAGGCCCATTGGACACACAAACTTTAT  190
      ||||||||||| |||||||||||||||||||||| |||||||||||||||
seq2  TAGTCGGCCATCCACTGGAAAGAGAGGCCCATTGAACACACAAACTTTAT  198

seq1  ATGCCCCAGAACAGGGGAACGCCAGGGCCAAAAAGGGGGAGTGGGCGGGT  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCCAGAACAGGGGAACGCCAGGGCCAAAAAGGGGGAGTGGGCGGGT  248

seq1  AGGGGAGTGGGGGTGGGTGGGTATGGGGGACATTTGGTATAGCATTGGAA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGTGGGGGTGGGTGGGTATGGGGGACATTTGGTATAGCATTGGAA  298

seq1  ATGTAAATGAGCTAAATACCTAATAAAAAATGGAAAGAAAAACAAACAAA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATGAGCTAAATACCTAATAAAAAATGGAAAGAAAAACAAACAAA  348

seq1  CAAACAAATAAAAATCCTATGGGCTATACCAGAACAAAAATTGCATGATT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAATAAAAATCCTATGGGCTATACCAGAACAAAAATTGCATGATT  398

seq1  AAATGGGAATCCTATTTTCTATTCATATGTATTAGCAGTAGTAATTGTAC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGAATCCTATTTTCTATTCATATGTATTAGCAGTAGTAATTGTAC  448

seq1  ATATTCTAATTTTAATACAAAATAATCCTTTTGCCCACAATTATTTTTAA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTAATTTTAATACAAAATAATCCTTTTGCCCACAATTATTTTTAA  498

seq1  GCTGTAAGCATTTTAACATAATGGGTTCAACATAACATTGTTTTGTATAC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAAGCATTTTAACATAATGGGTTCAACATAACATTGTTTTGTATAC  548

seq1  CAATTCTGCACATATGGGTCAGTGTAGTATAGATGAGAAGAAAGTAAGCA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTGCACATATGGGTCAGTGTAGTATAGATGAGAAGAAAGTAAGCA  598

seq1  TTTATCATTTATTATACATTGTTGCATTGTTAAAGTAGCCATTTAGACTT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCATTTATTATACATTGTTGCATTGTTAAAGTAGCCATTTAGACTT  648

seq1  GTTCTTAGTTATATTTCTGCAAAAGCTAATTAAAAGATAATGAGAAAAAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTAGTTATATTTCTGCAAAAGCTAATTAAAAGATAATGAGAAAAAA  698

seq1  TGCCCTTGCTTTGGTGGAATATTGTTTTGATGGTGCTTTGAAATTCATTT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTTGCTTTGGTGGAATATTGTTTTGATGGTGCTTTGAAATTCATTT  748

seq1  GGGATACCATTTAAAGAGAAACTTGAAATGTGGCACAGGCCTTTAACCCT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATACCATTTAAAGAGAAACTTGAAATGTGGCACAGGCCTTTAACCCT  798

seq1  TTGTTTTCTTTTTTGAGAATAATCATAATGTTTAAATGATGTAAGCATTT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCTTTTTTGAGAATAATCATAATGTTTAAATGATGTAAGCATTT  848

seq1  TCTAAAAACTTAAAACAATTTAAACTGCCCAGAAAGGTATCAGATGCCCT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAACTTAAAACAATTTAAACTGCCCAGAAAGGTATCAGATGCCCT  898

seq1  GTACCAAGATGGTATTACCGTGTACGGTCATTTGATTCATTTGTTACACT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAAGATGGTATTACCGTGTACGGTCATTTGATTCATTTGTTACACT  948

seq1  TAATGAAAATTTACTCATACATTTTTTCCTAAACAAAGTTCATACATTAT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAAATTTACTCATACATTTTTTCCTAAACAAAGTTCATACATTAT  998

seq1  TCTGAATTTTTATCCTTCCCATTAAATTGTATCTAATGACTGTCTTCATT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTTTTATCCTTCCCATTAAATTGTATCTAATGACTGTCTTCATT  1048

seq1  TCTGAATTC  1049
      |||||||||
seq2  TCTGAATTC  1057