BAC Information

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BAC

Clone NameB6Ng01-323J23
Chromosome1 (Build37)
Map Location 25,948,981 - 25,950,042
singlet/doubletsinglet
Overlap genenone
Upstream gene4930472D16Rik, LOC669171, Bai3, LOC665595
Downstream gene4931408C20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323J23.bB6Ng01-323J23.g
ACCGA112153GA112154
length9481,060
definitionB6Ng01-323J23.b B6Ng01-323J23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgaaattcttaggcaaatggatagaagtagaaaatatcatcct
caaggaggtaacccaatcacaaactagcacatatggtatgcactcactga
taagtggatattagctcaaaagctctaactacccaagatacaattcacag
accacatgaagctcaagaagaaggaagaccaaagtgtgggtgcttcagtc
cttcttagaaagggcagcaatactcacaggaacacatatggagacaaagt
gcagagcagagattgaaagaaaggccatccagatacatcccagacacagt
caccaaactctgacactattatagacgaaaagaagtgcttgctgaaaaga
gcctgtctcctaagaggccctgctagagccttacaaatacagagcctgac
actggcagccaaccattttactgagtgcaggttctccaatggaagagtta
gagaaagaactgaaggagctgaagaaaaacaattcaaccaaccatatccc
tgagaactcctagggactaagccaccaactgaggattacccaaggctgct
gctgcatatttagtagaggacatccttgtcaggcatcagtgggaggagag
gtccttggtcctatgaagtctccatagatgccctagtgtaggggaattga
gggtcaggaagtgagagagggtctatgggtggaggaacaccctcacagaa
gcagagggcagcgggatgggatggggagttcccagaagaggggaaaactg
ggtaagggaatagcacttgaagtgtaaataaattttttaaaaaaagatta
aaaatataaaaattaaaaattaaaaaaaaatgcttttagctattctggtt
tgtttggtttgttttcctttccagatgaatttgagagttggtcttttcat
gtctttgaagaattgtatttgggattttcgaagaggattgcgttgaat

gaattctagatgttgctaatttacatattcaatttctttgcggttactat
actggcatgttattttccccatcctccagttgagaagacttgcagagact
aaacaaatcactaatgtcttttttctctctctctctctttagctctttgg
aacaccacacaaagtgaagaaaagcctctataggttttatttaatcttca
catagtataaatgatatgggtcactcctttataagagacttaatttttcc
atgaaatacagtgaaataagaattattttgccacagctacactatcttat
attgttattccaacaagaaatatatgattgcttaaggaaacaggagctgt
gcattcttcaagctgcagcgctgactcagtcatgcagaactaacttcctg
gcggtctctgaatacacaccaagctgctctgtagctgttgctgacaatga
actagtgactggaaaaaggaatcttaaacacagtcacatctccagactct
taaaatcctgttcacaaggcctaatacactgcagaacgggaatatgttta
aagaaagtgtttgaacggtagaaaaagcattttatctaattttttttttt
ttttgagaattgctaggcaactaaaacattctttttacatatattcattg
gagtaccacaattctattgagcctttctagtggataattaattgttaaaa
atttgcttattctatactaaatattcaggagatagtaaatgaggtaattt
atttttggggggaccatttacagaaaatcttaaattgagcaactagtttt
atgggaagtgttactgtgtgatactttggaaggaagagacccactttcat
gggttggtttgctagttagtatttattaaattgagatgattcaaatgatt
gggttttgcttaaagtacaaatagtgaaaccggtttgatttacagaaaga
cttcagtagttgcagaaatccatctgagagtcccatcatggagcctcagc
ccatgttgcgcaaggggctatgtgatgttgatcccttgccacagaattag
gcccttagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_25948981_25950042
seq2: B6Ng01-323J23.g_62_1121

seq1  GAATTCTAGATGTTGCTAATTTACATATTCAATTTCTTTGCGGTTACTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGATGTTGCTAATTTACATATTCAATTTCTTTGCGGTTACTAT  50

seq1  ACTGGCATGTTATTTTCCCCATCCTCCAGTTGAGAAGACTTGCAGAGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCATGTTATTTTCCCCATCCTCCAGTTGAGAAGACTTGCAGAGACT  100

seq1  AAACAAATCACTAATGTCTTTTTTCTCTCTCTCTCTCTTTAGCTCTTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATCACTAATGTCTTTTTTCTCTCTCTCTCTCTTTAGCTCTTTGG  150

seq1  AACACCACACAAAGTGAAGAAAAGCCTCTATAGGTTTTATTTAATCTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCACACAAAGTGAAGAAAAGCCTCTATAGGTTTTATTTAATCTTCA  200

seq1  CATAGTATAAATGATATGGGTCACTCCTTTATAAGAGACTTAATTTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTATAAATGATATGGGTCACTCCTTTATAAGAGACTTAATTTTTCC  250

seq1  ATGAAATACAGTGAAATAAGAATTATTTTGCCACAGCTACACTATCTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATACAGTGAAATAAGAATTATTTTGCCACAGCTACACTATCTTAT  300

seq1  ATTGTTATTCCAACAAGAAATATATGATTGCTTAAGGAAACAGGAGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTATTCCAACAAGAAATATATGATTGCTTAAGGAAACAGGAGCTGT  350

seq1  GCATTCTTCAAGCTGCAGCGCTGACTCAGTCATGCAGAACTAACTTCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTTCAAGCTGCAGCGCTGACTCAGTCATGCAGAACTAACTTCCTG  400

seq1  GCGGTCTCTGAATACACACCAAGCTGCTCTGTAGCTGTTGCTGACAATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTCTCTGAATACACACCAAGCTGCTCTGTAGCTGTTGCTGACAATGA  450

seq1  ACTAGTGACTGGAAAAAGGAATCTTAAACACAGTCACATCTCCAGACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTGACTGGAAAAAGGAATCTTAAACACAGTCACATCTCCAGACTCT  500

seq1  TAAAATCCTGTTCACAAGGCCTAATACACTGCAGAACGGGAATATGTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCCTGTTCACAAGGCCTAATACACTGCAGAACGGGAATATGTTTA  550

seq1  AAGAAAGTGTTTGAACGGTAGAAAAAGCATTTTATCTAATTTTTTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGTGTTTGAACGGTAGAAAAAGCATTTTATCTAATTTTTTTTTTT  600

seq1  TTTTGAGAATTGCTAGGCAACTAAAACATTCTTTTTACATATATTCATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGAATTGCTAGGCAACTAAAACATTCTTTTTACATATATTCATTG  650

seq1  GAGTACCACAATTCTATTGAGCCTTTCTAGTGGATAATTAATTGTTAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACCACAATTCTATTGAGCCTTTCTAGTGGATAATTAATTGTTAAAA  700

seq1  ATTTGCTTATTCTATACTAAATATTCAGGAGATAGTAAATGAGGTAATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTTATTCTATACTAAATATTCAGGAGATAGTAAATGAGGTAATTT  750

seq1  ATTTTTGGGGGGACCATTTACAGAAAATCTTAAATTGAGCAACTAGTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGGGGGGACCATTTACAGAAAATCTTAAATTGAGCAACTAGTTTT  800

seq1  ATGGGAAGTGTTACTGTGTGATACTTTGGAAGGAAGAGA-CCACTTTCAT  849
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATGGGAAGTGTTACTGTGTGATACTTTGGAAGGAAGAGACCCACTTTCAT  850

seq1  GGGTTGGTTTGCTAGTTAGTATTTATT-AATTGAGATGATTCAAATGATT  898
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGGTTGGTTTGCTAGTTAGTATTTATTAAATTGAGATGATTCAAATGATT  900

seq1  GGTTTTTGCTTAAAGTACAAATAGTGAAACCGGTTTGATTTTACAGAAAG  948
      || ||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGGTTTTGCTTAAAGTACAAATAGTGAAACCGGTTTGA-TTTACAGAAAG  949

seq1  ACTTCAGTAGTTGGCAGGAAATCCATCTGAGAGTTCCATCATGGAG-CTC  997
      |||||||||||| ||| ||||||||||||||||| ||||||||||| |||
seq2  ACTTCAGTAGTT-GCA-GAAATCCATCTGAGAGTCCCATCATGGAGCCTC  997

seq1  AGCCCATGGTGCGGCAGGGGCTAATTGTGATGGTGATCCCCTGGCACAGA  1047
      |||||||| ||||  ||||||||  ||||||| ||||||| || ||||||
seq2  AGCCCATGTTGCGCAAGGGGCTA--TGTGATGTTGATCCCTTGCCACAGA  1045

seq1  ATAAGCCCTTTAGTA  1062
      || || || ||||||
seq2  ATTAGGCCCTTAGTA  1060


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