BAC Information

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BAC

Clone NameB6Ng01-325F09
Chromosome1 (Build37)
Map Location 151,080,973 - 151,082,143
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042792, LOC435647
Downstream geneLOC100042813, Pla2g4a, Ptgs2, LOC676712
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325F09.bB6Ng01-325F09.g
ACCGA113421GA113422
length1,1661,202
definitionB6Ng01-325F09.b B6Ng01-325F09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttataaggctgagagaaataaaatgaagatttgtgagtatgt
cactttctaaccagatagttagggctccgcccagcattgttattgtgagg
agtatggaacattacagaggtgaagcacttacaggtgcagtgagcactca
ggcatgctcagtaataattatcactctgtgcctttaagcattcaactttt
atttaattaaaaaaatgtcacagggtagtttttcttatctctgtggtttt
cttgaggaatttgggacttagaaaattaagcaactgttttaaagaccaac
tgaaagcagttcaccggatgtatgtttacatgtatgttcacagaaccaca
aaatgaaatccacttcggatatgtcactccttaaataggcaacggggaaa
caatgtgatgcatacagtaacaaaaaggtcttttcacttcaaatgaagta
tattttcctctataaattgaataagtaaaacacagacatactacaaacat
aacaaaaatattagtataaaattatatttgcaaggaatcaaatctatcct
agtaggttgaaaaaaaatctcctgtctcctcctttgattgatatacattc
aagctatctgttacacagttccaactaatttattaggagagtataaaatc
tgtgttagtttctccaagttgaatgcaatcagtatgtaccttttgataca
ggaagattacttcttgtttccgagctaagtttgtgtcagcaagtcactta
gatcactcaaatgtaagatttgctgatgtgatgaaatccatagccggtta
attgcatccagtttttaagtgaaaagcatcttccttacaaccatcagcat
catcatggaggggttaagtgcaatctgagtgctcttatgcagcaatatgg
tgccaaaactgctgacctggttgtttctccatcagctcatgctgaaccca
agatgaagaaataaaatagaaatttcgagtctttatgtaaacatccagat
gacatattctgcaaggaaggcagttttgaataataaaaactttcatgcag
atttcaattttattgtgtacaaaagatactcaatattatgcaaatgggga
tgaaatatgtttcccagaatgtagcagtgtgtttgggtgaccaagtcctg
gaattctgttatcatg

gaattcatacagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cagtcccgagttttttctcgtcccggaattcggcaccaattgttattaga
cgcgttctcacgaccggccaggaaagacaccacagaccagaatcttctgc
ggcaaagctttattgcttacatcttcaggagccagagtgcaagaagcaag
agagcaagaagcaagagagagagaaaacgaaaccccgtccctattaaaga
gaattctccttcgcctaggacgtgtcactccctgattggctgcagcccat
cggccgagttgacgtcacggggaaggcagagcacatggagtgaagaacca
ccctcggcacatgcgcagattatttgtttaccacttagaacacagctgtc
agcgccatcttgtaacggcgaatgtgggcgcggctcccaacataggatag
taaaaactattctcagcaataaaagaacctctagtggaatcaccatgtct
gacctaaagctgtactacagagcaatcatgataaaaactgcatggtactg
gtacatcgacagacaggtagataaatggaataggattgaagacccagaaa
tgaacctacacacttatggtcacttgatctttgacaagggagctaaaacc
atccagtggaaaaaaagacaccattttcaacaaatggtgccagcacagct
ggcagttatcatgtagaagaattcgaattgatccattcttatctccttgt
acaaagctcaagtctaagtggatcaaagacctccacttaaaactatatac
accgaaatgtgtagaggagaaaatcaggaaaagcatccaagatatgggca
caggggagaaattcctgaacagaacagcaatggcttgtctgtaagatcag
aatcacaatgggacctcataaaattgcaaagcttctataggcaaaagata
ctgtcaataagacaaagggcaccaagagatttggaaagtattttttacca
atctaaatctgatgagactaatatcattatataacaaagagctcagaagc
tggaactcgaaaatcaaatatcctaataaaaggtggtacgagcctaccac
gttctctacctggaggaatcgaatggctggaaagcaccctgtagagaaat
at
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_151080973_151082143
seq2: B6Ng01-325F09.b_47_1212

seq1  GAATTCATTTATAAGGCTGAGAGAAATAAAATGAAGATTTGTGAGTATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATAAGGCTGAGAGAAATAAAATGAAGATTTGTGAGTATGT  50

seq1  CACTTTCTAACCAGATAGTTAGGGCTCCGCCCAGCATTGTTATTGTGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCTAACCAGATAGTTAGGGCTCCGCCCAGCATTGTTATTGTGAGG  100

seq1  AGTATGGAACATTACAGAGGTGAAGCACTTACAGGTGCAGTGAGCACTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGGAACATTACAGAGGTGAAGCACTTACAGGTGCAGTGAGCACTCA  150

seq1  GGCATGCTCAGTAATAATTATCACTCTGTGCCTTTAAGCATTCAACTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCTCAGTAATAATTATCACTCTGTGCCTTTAAGCATTCAACTTTT  200

seq1  ATTTAATTAAAAAAATGTCACAGGGTAGTTTTTCTTATCTCTGTGGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTAAAAAAATGTCACAGGGTAGTTTTTCTTATCTCTGTGGTTTT  250

seq1  CTTGAGGAATTTGGGACTTAGAAAATTAAGCAACTGTTTTAAAGACCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGAATTTGGGACTTAGAAAATTAAGCAACTGTTTTAAAGACCAAC  300

seq1  TGAAAGCAGTTCACCGGATGTATGTTTACATGTATGTTCACAGAACCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCAGTTCACCGGATGTATGTTTACATGTATGTTCACAGAACCACA  350

seq1  AAATGAAATCCACTTCGGATATGTCACTCCTTAAATAGGCAACGGGGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAATCCACTTCGGATATGTCACTCCTTAAATAGGCAACGGGGAAA  400

seq1  CAATGTGATGCATACAGTAACAAAAAGGTCTTTTCACTTCAAATGAAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGATGCATACAGTAACAAAAAGGTCTTTTCACTTCAAATGAAGTA  450

seq1  TATTTTCCTCTATAAATTGAATAAGTAAAACACAGACATACTACAAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCCTCTATAAATTGAATAAGTAAAACACAGACATACTACAAACAT  500

seq1  AACAAAAATATTAGTATAAAATTATATTTGCAAGGAATCAAATCTATCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAATATTAGTATAAAATTATATTTGCAAGGAATCAAATCTATCCT  550

seq1  AGTAGGTTGAAAAAAAATCTCCTGTCTCCTCCTTTGATTGATATACATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGTTGAAAAAAAATCTCCTGTCTCCTCCTTTGATTGATATACATTC  600

seq1  AAGCTATCTGTTACACAGTTCCAACTAATTTATTAGGAGAGTATAAAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATCTGTTACACAGTTCCAACTAATTTATTAGGAGAGTATAAAATC  650

seq1  TGTGTTAGTTTCTCCAAGTTGAATGCAATCAGTATGTACCTTTTGATACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTAGTTTCTCCAAGTTGAATGCAATCAGTATGTACCTTTTGATACA  700

seq1  GGAAGATTACTTCTTGTTTCCGAGCTAAGTTTGTGTCAGCAAGTCACTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATTACTTCTTGTTTCCGAGCTAAGTTTGTGTCAGCAAGTCACTTA  750

seq1  GATCACTCAAATGTAAGATTTGCTGATGTGATGAAATCCATAGCCGGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTCAAATGTAAGATTTGCTGATGTGATGAAATCCATAGCCGGTTA  800

seq1  ATTGCATCCAGTTTTTAAGTGAAAAGCATCTTCCTTACAACCATCAGCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATCCAGTTTTTAAGTGAAAAGCATCTTCCTTACAACCATCAGCAT  850

seq1  CATCATGGAGGGGTTAAGTGCAATCTGAGTGCTCTTATGCAGCAATATGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGGAGGGGTTAAGTGCAATCTGAGTGCTCTTATGCAGCAATATGG  900

seq1  TGCCAAAACTGCTGACCTGGTTGTTTCTCCATCAGCTCATGCTGAACCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAAACTGCTGACCTGGTTGTTTCTCCATCAGCTCATGCTGAACCCA  950

seq1  AGATGAAGAAATAAAATAGAAATTTCGAGTCTTTATGTAAACATCCAGAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAAGAAATAAAATAGAAATTTCGAGTCTTTATGTAAACATCCAGAT  1000

seq1  GACATATTCTGCAAGGAAGGCAGTTTTGAATAATAAAAACTTTCATGCAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATTCTGCAAGGAAGGCAGTTTTGAATAATAAAAACTTTCATGCAG  1050

seq1  AATTTTCCATTTTATTGTGTACAAAAGATTACTTCAAATATTATGCAAAT  1100
      |  |||| |||||||||||||||||||| ||||   ||||||||||||||
seq2  A--TTTCAATTTTATTGTGTACAAAAGA-TACT--CAATATTATGCAAAT  1095

seq1  GGGGATTGAATATGTTTTCCCAG-ATGTAGCAGTGTGTTTTGGGTGACCC  1149
      ||||||  |||||| |||||||| ||||||||||||| ||||||||||| 
seq2  GGGGATGAAATATG-TTTCCCAGAATGTAGCAGTGTG-TTTGGGTGACCA  1143

seq1  AGTCCT-GAAATCTGTTATCATG  1171
      |||||| ||| ||||||||||||
seq2  AGTCCTGGAATTCTGTTATCATG  1166


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