BAC Information

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BAC

Clone NameB6Ng01-325I07
Chromosome1 (Build37)
Map Location 117,673,721 - 117,674,515
singlet/doubletsinglet
Overlap geneCntnap5a
Upstream geneLOC227506
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325I07.bB6Ng01-325I07.g
ACCGA113556GA113557
length1041,000
definitionB6Ng01-325I07.b B6Ng01-325I07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgaacttctttttaaaaaaagtttttaattaggtattttcctc
atttacatttccaatgctatcccaaaagtcccccaaaccctccccctact
cccc

gaattctttataatggattgtctagattagattgtcctgtggacatgtct
gtgcaagaatgttttgattatgttaaaccatctgcctactgtgggtgaca
taattccctatcaggtgatcctggattgcaaaagagtggaaaaaaaaaca
aacaaaataaaaatagaacaaaaacaaccacagaaacccaaaaccaatca
aacaacaaaaacaacacaaaacaaaaacaaacacaaacaaaaaggtgagt
gcagccatgcattggtctgtgttctttgtgaatatattgtgaactgtttc
tatagcttctgtatatgtgacttccactctaaagtgaactataaacttaa
atcatgagcttttacaaagaaactctttcctctaagtaacatttgtcaga
attttgtattacagcaacagtacaaaagataaataaataaataaataaat
agtaaataatggttcaatatatgtctttgtacatctcacattttgagcca
catttgggcttagtctggctaggcaatgtaagggatagtatgaatgaaac
actgcccttggaacagagtcagcagagtatggactccgcaagtgttgaca
gttaaagtagttgaaaggctttttaatattgcacatatttttacattccc
tctttaaggaatatgccaagattaatgatcataataaaagaccttgtgag
ttctggaggcgagggcatgatttctcttaacaaaatggtagaatgctgtg
aacctcaggacagcagttaaggctgtggaaaagaatactaaaaacctgag
ttcaaaagtatatactttctcaactatacaaaaatacaaggatttaatat
gaattgtataagtatcttcacagactgaaaggtacacagctacctggact
ataatccagcttgtcagaaagtcactaagaaagggaataaagagatttag
tgtgatcacaaggcaacatttgacctcactaagtgtttgtttgtttgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_117673721_117674515
seq2: B6Ng01-325I07.g_278_1066

seq1  CAACACAAAACAAAAACAAACACAAACAAAAAGGTGAGTGCAGCCATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAAAACAAAAACAAACACAAACAAAAAGGTGAGTGCAGCCATGCA  50

seq1  TTGGTCTGTGTTCTTTGTGAATATATTGTGAACTGTTTCTATAGCTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTGTGTTCTTTGTGAATATATTGTGAACTGTTTCTATAGCTTCTG  100

seq1  TATATGTGACTTCCACTCTAAAGTGAACTATAAACTTAAATCATGAGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGACTTCCACTCTAAAGTGAACTATAAACTTAAATCATGAGCTT  150

seq1  TTACAAAGAAACTCTTTCCTCTAAGTAACATTTGTCAGAATTTTGTATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAGAAACTCTTTCCTCTAAGTAACATTTGTCAGAATTTTGTATTA  200

seq1  CAGCAACAGTACAAAAGATAAATAAATAAATAAATAAATAGTAAATAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACAGTACAAAAGATAAATAAATAAATAAATAAATAGTAAATAATG  250

seq1  GTTCAATATATGTCTTTGTACATCTCACATTTTGAGCCACATTTGGGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATATATGTCTTTGTACATCTCACATTTTGAGCCACATTTGGGCTT  300

seq1  AGTCTGGCTAGGCAATGTAAGGGATAGTATGAATGAAACACTGCCCTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGCTAGGCAATGTAAGGGATAGTATGAATGAAACACTGCCCTTGG  350

seq1  AACAGAGTCAGCAGAGTATGGACTCCGCAAGTGTTGACAGTTAAAGTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGTCAGCAGAGTATGGACTCCGCAAGTGTTGACAGTTAAAGTAGT  400

seq1  TGAAAGGCTTTTTAATATTGCACATATTTTTACATTCCCTCTTTAAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGCTTTTTAATATTGCACATATTTTTACATTCCCTCTTTAAGGAA  450

seq1  TATGCCAAGATTAATGATCATAATAAAAGACCTTGTGAGTTCTGGAGGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCAAGATTAATGATCATAATAAAAGACCTTGTGAGTTCTGGAGGCG  500

seq1  AGGGCATGATTTCTCTTAACAAAATGGTAGAATGCTGTGAACCTCAGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATGATTTCTCTTAACAAAATGGTAGAATGCTGTGAACCTCAGGAC  550

seq1  AGCAGTTAAGGCTGTGGAAAAGAATACTAAAAACCTGAGTTCAAAAGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTAAGGCTGTGGAAAAGAATACTAAAAACCTGAGTTCAAAAGTAT  600

seq1  ATACTTTCTCAACTATACAAAAATACAAGGATTTAATATGAATTGTATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTCTCAACTATACAAAAATACAAGGATTTAATATGAATTGTATAA  650

seq1  GTATCTTCACAGACTGAAAGGTACACAGCTACCTGGACTATAATCCAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTTCACAGACTGAAAGGTACACAGCTACCTGGACTATAATCCAGCT  700

seq1  TGTCAGAAAGTCACTAAGAAAGGGAATAAAGAGATTTAGGTGGTGATCAC  750
      |||||||||||||||||||||||||||||||||||||||   ||||||||
seq2  TGTCAGAAAGTCACTAAGAAAGGGAATAAAGAGATTTAG--TGTGATCAC  748

seq1  AAGGCAACATTTGACCTCACTAAGTTGTTTTGTTTTGTTTTGTTT  795
      |||||||||||||||||||||||||   |||||||   |||||||
seq2  AAGGCAACATTTGACCTCACTAAGT--GTTTGTTT--GTTTGTTT  789


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