BAC Information

Click to search

BAC

Clone NameB6Ng01-325J01
Chromosome1 (Build37)
Map Location 64,066,013 - 64,066,955
singlet/doubletsinglet
Overlap genenone
Upstream geneA430093A21Rik, Ndufs1, Eef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik, LOC667644, LOC100042638, Adam23, Gm215, Mdh1b, Fastkd2, 4933402D24Rik, LOC671842, OTTMUSG00000013918
Downstream geneKlf7, Ppia-ps1_583.1, LOC100043124, Creb1, 2310038H17Rik, Ccnyl1, Fzd5, 9430067K14Rik, LOC667245, LOC100043141, 4921521F21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325J01.bB6Ng01-325J01.g
ACCGA113591GA113592
length8241,208
definitionB6Ng01-325J01.b B6Ng01-325J01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaactgcaagaggaaatcctgtttaaaagatctggcgcaggag
gggaagtagcctggtgtctccctcctactctgtccattttccttacttgc
agccactgcagcactgctgaaagatcaaggcccagagaggccaagcaatg
gacttcaggccacacagctcaccagtgtcacagcccgagagctagggaaa
tgaatctagagccttctcttatccttttcttctactaggctgttttaccc
gtgacaaaagtcgcatatcttacacacgttatctttgtcctaattggaat
gaaattagggcttttctctcactgtgttctctgctcttgctctcatggag
ctgccgcgaatgattctgatttttttccctctagcactgttcacaggtga
atgtcacaggtatgaatgcggaggaacccatctttctgctaaggggagtc
ggcacgctgtccctgaaggtaggagttcaccacgaattattagcatacac
agctcaagtgtctgcaaggctagatggaatattctaaagtttacctcacg
accatgaaaggggcgtagtttgtgctttaccctatagaagagtctctggg
tgacatttgccttgctcctgccttacctatggcttacctgagttctagaa
ggatgaacacacgcaccttaccagggatgaaccatagctctgaacctgaa
caatcggaaaaaaaaaattttttttttctctcaggaaactggaattgggg
actggaagattatgagcttctgtggggagccaggtcatggcaggaaagaa
attaaaagtggggggggagggggg
gaattcagaacttttcagctgggggaacgagagtaccagtgagtatagct
ttacgaggtaagcctggccttgaactttctaaggaaattcaagacagtct
atcagaagtaaagtggaaaatggctttacaagttatgtttggccttgaat
tttttctagtgttagaagcccttttgttccttttcacatgttatcaagtg
gttaaggcagggcggattctagatgaaattcaggacaagctatcagaagt
aaagtggggagagagagtaggaacaaagaggaaatatggtacacaaaata
agtatacaggcctttccaagggtcttgaacccgaggaaaagttaaggtta
ggtaggaatacctggagagagattagaagaaaaagaggaaaaagggaaaa
gaagaaagatcaattagcggaggtctctaggaaaaggagcctgtgctcat
cgctggatgggctcggggagccagctcttggtagctctgaatcagatgat
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagcc
ctgcgcagagaggcaatgcgcagagaggcagtgcgcagactcattcattc
ccagagaggaacaaaggaaaatacaacaggcatttccggtctttgaagga
gccgagggtgggcgtgtccacgctccggtagaatacttacaattaaagag
cttgccgagtcggtccgtaaatacggaaccaatgctaattttaccttggg
tgcagttagacaggctggccgggcatggcactaacctcctgccgactggc
aaacggttgtaaaagccgctctccctagtatgggcaaatatatgtattgg
agagctctttggcatgaaactggcacaagcgcaggcccaagcaatcgcag
ctggctttggacttcaggatcaagaagagatttgacttttggacctttgt
accggtcaggaggctatttctgctgaatcatacaaccttaccatggggag
ctaggtcccagattcctcatcgcttattatggcctggaaggcgacctctg
ctgagagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_64066013_64066955
seq2: B6Ng01-325J01.b_46_869

seq1  GAATTCCAAACTGCAAGAGGAAATCCTGTTTAAAAGATCTGGCGCAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAACTGCAAGAGGAAATCCTGTTTAAAAGATCTGGCGCAGGAG  50

seq1  GGGAAGTAGCCTGGTGTCTCCCTCCTACTCTGTCCATTTTCCTTACTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGTAGCCTGGTGTCTCCCTCCTACTCTGTCCATTTTCCTTACTTGC  100

seq1  AGCCACTGCAGCACTGCTGAAAGATCAAGGCCCAGAGAGGCCAAGCAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACTGCAGCACTGCTGAAAGATCAAGGCCCAGAGAGGCCAAGCAATG  150

seq1  GACTTCAGGCCACACAGCTCACCAGTGTCACAGCCCGAGAGCTAGGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCAGGCCACACAGCTCACCAGTGTCACAGCCCGAGAGCTAGGGAAA  200

seq1  TGAATCTAGAGCCTTCTCTTATCCTTTTCTTCTACTAGGCTGTTTTACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTAGAGCCTTCTCTTATCCTTTTCTTCTACTAGGCTGTTTTACCC  250

seq1  GTGACAAAAGTCGCATATCTTACACACGTTATCTTTGTCCTAATTGGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAAAAGTCGCATATCTTACACACGTTATCTTTGTCCTAATTGGAAT  300

seq1  GAAATTAGGGCTTTTCTCTCACTGTGTTCTCTGCTCTTGCTCTCATGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAGGGCTTTTCTCTCACTGTGTTCTCTGCTCTTGCTCTCATGGAG  350

seq1  CTGCCGCGAATGATTCTGATTTTTTTCCCTCTAGCACTGTTCACAGGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCGCGAATGATTCTGATTTTTTTCCCTCTAGCACTGTTCACAGGTGA  400

seq1  ATGTCACAGGTATGAATGCGGAGGAACCCATCTTTCTGCTAAGGGGAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACAGGTATGAATGCGGAGGAACCCATCTTTCTGCTAAGGGGAGTC  450

seq1  GGCACGCTGTCCCTGAAGGTAGGAGTTCACCACGAATTATTAGCATACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACGCTGTCCCTGAAGGTAGGAGTTCACCACGAATTATTAGCATACAC  500

seq1  AGCTCAAGTGTCTGCAAGGCTAGATGGAATATTCTAAAGTTTACCTCACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAAGTGTCTGCAAGGCTAGATGGAATATTCTAAAGTTTACCTCACG  550

seq1  ACCATGAAAGGGGCGTAGTTTGTGCTTTACCCTATAGAAGAGTCTCTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGAAAGGGGCGTAGTTTGTGCTTTACCCTATAGAAGAGTCTCTGGG  600

seq1  TGACATTTGCCTTGCTCCTGCCTTACCTATGGCTTACCTGAGTTCTAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTTGCCTTGCTCCTGCCTTACCTATGGCTTACCTGAGTTCTAGAA  650

seq1  GGATGAACACACGCACCTTACCAGGGATGAACCATAGCTCTGAACCTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAACACACGCACCTTACCAGGGATGAACCATAGCTCTGAACCTGAA  700

seq1  CAATCGGAAAAAAAAAATTTTTTTTTTCTCTCAGGAAACTGGAATTGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCGGAAAAAAAAAATTTTTTTTTTCTCTCAGGAAACTGGAATTGGGG  750

seq1  ACTGGAAGATTATGAGCTTCTGTGGGGAGCCAGGTCATGGCAGGAAAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAGATTATGAGCTTCTGTGGGGAGCCAGGTCATGGCAGGAAAGAA  800

seq1  ATTAAAAGT-GGGGGGGAGGGGGGAACTGACTACTTATGCACGAGATGAG  849
      ||||||||| ||||||||||||||                          
seq2  ATTAAAAGTGGGGGGGGAGGGGGG--------------------------  824

seq1  GAACCCAGGAGTTGTGAGAAATACAAAGGAAATGTAGGAGGGAGGGGAAA  899
                                                        
seq2  --------------------------------------------------  824

seq1  AGAGGGAGGGAGGGGGAAGCATGAGGAGGGGAAAAGGAGGGGGG  943
                                                  
seq2  --------------------------------------------  824